KEGG   Sylvia atricapilla (blackcap): 136366872
Entry
136366872         CDS       T10263                                 
Symbol
BLM
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati03440  Homologous recombination
sati03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sati00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    136366872 (BLM)
   03460 Fanconi anemia pathway
    136366872 (BLM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sati03032]
    136366872 (BLM)
   03400 DNA repair and recombination proteins [BR:sati03400]
    136366872 (BLM)
Enzymes [BR:sati01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     136366872 (BLM)
DNA replication proteins [BR:sati03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    136366872 (BLM)
DNA repair and recombination proteins [BR:sati03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     136366872 (BLM)
    Bloom's syndrome complex (BTR)
     136366872 (BLM)
   FA (Fanconi anemia) pathway
     136366872 (BLM)
SSDB
Motif
Pfam: DEAD BLM_N BDHCT RecQ_Zn_bind Helicase_C HRDC RQC BDHCT_assoc UCC1_N
Other DBs
NCBI-GeneID: 136366872
NCBI-ProteinID: XP_066184238
LinkDB
Position
13:506243..522107
AA seq 1400 aa
MAAVPQNNLREQLLRHSARGALRTPAPPRDRPPGFTFKKAPRSLAAAAVLRDKDVNTSLG
PPASAPPDRKAPAWGCAPARSPGPRPACAPPGPAEAPKGPAAPAAKAGPVIIIGDEWDDI
DDFDLSGLERRFSRPPLVSPKGLRGPRQEPPRALGSPGGEDAGPGPEQRLCSQSPVTCRR
QPAPCGGSPAAGPGPRQSPAEPGREADSAGARPAAGAGGALGQEQQGAGNKSPPKLDEAT
SPLAGAELEEDDLDIIPPSPEEELPPFSPSVPSVSSVSSASPTGGRCTAGSSEARQEKVP
TAHPGGDPSAGDSGEAVPVSPPLYRVMEAICELVDAIPLQELQALGCARALLQHRDLRRK
LLANSVSLNQNGTSTTFPRSWKSPMEQGSRVCPGAGSGPSWSFSSDRNSPKSTDLPSVLS
VHSSSFSANPDQTLGSAPKQGAEEMPCPGPAELPLPGGGGREGASPGLSVPAWDSSWDSP
RGPGRQLLPGPAPRASSTAPRAPSTAPRASSTAPRAPSTAPAASTAPAAAPAGNSPAPDL
DLDLDHFDIDDLDEDWESSVPAAAPCPPGREGPPAKSLLAKIMSRAQGSAGGASPAAPRP
GLLMATKNHPDPVVHNPALERFRGMKFPHSAEMMNVFHKKFGLHCFRTNQLEAINAALLG
EDCFILMPTGGGKSLCYQLPACVSAGVTIVISPLRSLIIDQVQKLKTLDISATYLTGDRT
DADASKIYMQLSKKDPVIKLLYVTPEKVCASSRLMSALENLYDRKLLARFVIDEAHCVSQ
WGHDFRQDYKRLNTLRRRFRAVPMMALTATANPRVQKDILNQLEMLKPQVFTMSFNRHNL
KYDVLPKKPKKVAMDCLEWIKKNHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGL
TDSNRDLVQQKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGR
DGEVSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCENVVECRRVQLL
AYFGETNFNPTFCKDHPEVICDNCSRKKDYKARNVTEDVRSIVRFVREHCGHAGRLNGKR
SPGTGRYTLNMMVDIFLGSTSAKIQSGIFGKGAAYSRHNAERLFRKLVLDKILDEDLYIT
ANDQAVAYVILGERAQAVLDGSLQVEFYETESASAIRRQRASMAKMSQREEMVKQCLSEL
TDTCKTLGKVFDVHYFNIFSTSTLKKIAETLSSDVEVLLQIDGVTEDKLEKYGAEIIKVM
DKYSECSIPEDAACPGVDTATGSPGSLGSDGEAQDTGTTSSYFGNNTNQRRKRKRPSNCR
DSKRKKMSGGGSQQPHPRGGYSRYRRTKKLPSSKATPASSGASFMSHSIGGTQGAAGKLA
MMALPKPKSRSFLQPSYSIF
NT seq 4203 nt   +upstreamnt  +downstreamnt
atggcggccgtgccgcagaacaacttgcgggagcagctgctgcggcactcggcccgcggg
gccctgcgcaccccggcgccgccgcgggaccgcccgccgggcttcaccttcaagaaggcg
ccgcggagcctggccgccgccgcggtgctgagggacaaggacgtgaatacctcgctgggc
ccgcccgcctcggctccgccggacagaaaagcgccggcgtggggctgtgctccggcccgc
agccccgggccccggccggcctgtgcccccccgggccccgccgaggcgcccaagggcccc
gccgctcccgccgccaaggccgggcccgttatcatcatcggcgatgagtgggatgacatc
gacgacttcgacctgtcgggactcgagaggaggttctcccggccgcccctggtgtccccc
aaggggctgcgagggccccgccaggagcccccgcgggctctgggctctccgggcggggag
gacgcggggcccgggcccgagcagcgcctgtgctcgcagagccccgtgacgtgccgccgg
cagccggctccgtgcggcgggagcccggcggcggggcccggcccccggcagtcacccgcg
gagcccggccgggaggcggacagcgccggggctcgcccagctgctggtgctggaggggct
ctgggccaggagcagcagggggctgggaacaaaagccccccaaagctggatgaggccacc
tcgcccttggcaggtgctgagctggaggaggatgacctggacatcattcctccgtcccct
gaggaggagctgcctcccttctccccctctgtaccgagtgtcagcagcgtttccagtgcc
tctcccactggtggaagatgcacagctggcagctctgaggccaggcaggagaaggttccc
acagcacatcctgggggtgatcccagtgcaggggattcaggtgaggccgtgcccgtgtcc
ccgccgctgtaccgagtcatggaggccatctgtgagctggtggacgccatccccctgcag
gagctgcaggccctgggctgtgccagggccctcctgcagcacagggacctcaggagaaaa
ttgctggctaattctgtcagtttgaaccaaaatggcacaagcaccacttttcctaggagc
tggaagtctcccatggagcagggctctcgtgtgtgtcctggtgcaggttctggcccaagc
tggagcttcagttctgacagaaactcccccaaatccacagacctcccatcggtgctttct
gtccattccagcagcttttctgcaaacccagatcaaaccttgggcagtgctccaaagcag
ggtgctgaggagatgccctgcccagggcctgcagagctgcctctccccgggggcggtggc
agggagggagcttcccccgggctcagcgtcccggcctgggacagcagctgggacagtccc
cggggccccgggaggcagctgctgcccggcccagccccgagggcttccagcacagccccg
agggctcccagcacagccccgagggcttccagcacagccccgagggctcccagcacagct
cctgctgccagcacggctcccgctgccgctcctgcggggaacagcccggccccggacctg
gacctagacctggatcacttcgacatcgacgacctggatgaggactgggagagctccgtg
cctgctgcggcgccgtgccccccgggcagggaggggcctcctgccaaatccctcctggcc
aagatcatgtccagagcccagggctcggctgggggagccagtcctgctgccccaaggcca
ggcctgctgatggcaacaaagaaccacccagatccagtggtccataaccctgccctggag
cgtttcaggggtatgaagttcccccattctgcagagatgatgaatgtatttcataagaag
tttgggttgcactgtttccggacaaaccagctggaggccatcaacgctgctctgctgggg
gaggattgcttcatcctcatgcccacaggaggtgggaagagcttgtgctaccagttacca
gcctgtgtctctgccggggtcaccatcgtcatctccccgctgaggtcgctcatcatcgat
caggtccagaagctgaagactttagatatttctgcaacatacctgactggtgacagaaca
gatgctgatgcctcaaaaatctacatgcagctgtcaaagaaagaccctgtcataaagctg
ctgtatgttacccctgagaaggtgtgtgccagcagccggctgatgtccgccctggagaac
ctctacgacaggaaactcctggcgcgttttgtcattgacgaggcccactgtgtcagccag
tggggccacgacttccggcaggactacaagcgcctgaacacgctgcgcaggaggttccgc
gccgtgcccatgatggccctgacggccaccgccaacccccgcgtgcagaaggacatcctc
aaccagctggagatgctcaagccacaagtgtttacaatgagcttcaacaggcacaacttg
aaatacgatgtgttgcccaagaagccaaagaaggtggcgatggattgcttggaatggatt
aaaaaaaatcacccccatgactctgggataatctattgcctttcccggcacgagtgtgac
accacagcagccatcctgcagaaggaggggctggctgccctggcctaccacgccggcctc
accgactccaacagggatcttgtgcagcagaagtgggttaaccaggagggatgccaggtg
atctgtgcaaccattgcctttgggatgggcattgacaagcccgacgtgcgctacgttatc
cacgcgtcccttcccaaatccatcgagggctactaccaggagtctggcagggctgggcgg
gacggggaggtgtcccactgcctgctcttctacagctacagtgacgtgaccaggctgaga
aggctcatcctcatggagaaggatgggaacagccacacgaggcagacccacttcaacaac
ctgtacagcatggtgcactactgtgagaacgtggtcgagtgccgccgtgtccagctgctt
gcctactttggggaaaccaacttcaaccccaccttctgcaaagatcacccagaagtgatt
tgtgataactgcagtaggaagaaggattacaaagcaaggaatgtgacggaggatgtgagg
agcattgtgcggttcgtgcgcgagcactgcggccacgcggggcggctcaacggcaagagg
agtccaggcactggcaggtacaccctcaacatgatggtggacattttcttaggttcaacg
agtgccaagattcagtctggaatatttgggaagggggctgcctattccaggcacaatgct
gaaaggctgttcagaaaactggtcctggacaagatcctggatgaggatttgtacatcaca
gctaatgaccaggccgtggcatacgtcattctgggagagagagctcaggctgtgctggat
gggtcactccaggtggaattctatgagacagagagtgccagtgccatcagaaggcaaagg
gcttccatggcaaagatgtcccagcgggaagagatggtgaaacagtgcctcagtgaactt
acagacacctgcaaaaccctgggcaaagtcttcgatgtgcattacttcaatattttcagt
acttccaccctaaagaaaatagcagaaaccttgtcctcagacgtggaggtgttgctgcag
atcgatggtgtcacagaagacaaactggagaaatatggtgcagaaataattaaagtgatg
gataagtactcagaatgctccatcccagaagatgctgcctgccccggtgtggacacagcc
acggggagccctggctcactgggcagcgatggagaagcacaggacacaggcacaacctcc
agctatttcggcaataacacaaaccagaggaggaaaaggaaacggccatccaactgcagg
gactccaagaggaaaaagatgagtggtggtggcagccagcagccccaccccagaggtggc
tacagcaggtacagaaggaccaagaagctgccaagctcaaaggcaactccagcttcctct
ggtgccagcttcatgtcccacagcattggtggcacacagggagctgctgggaagctggcc
atgatggcactgcccaaacccaaatccaggagcttccttcagccttcatattccatattt
tag

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