Sylvia atricapilla (blackcap): 136366997
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Entry
136366997 CDS
T10263
Symbol
ARNT2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
sati Sylvia atricapilla (blackcap)
Brite
Transcription factors [BR:
sati03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
136366997 (ARNT2)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
136366997
NCBI-ProteinID:
XP_066184428
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Position
13:8416571..8510381
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AA seq
731 aa
AA seq
DB search
MATPAAVNPPEMASDIPGSVALPVAPMASGQVRMAGSMPSRGGKRRSGMDFDDEDGEGPS
KFSRYDGDQITGDKEKFARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTIL
RMAVSHMKSMRGTGNKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDS
VTPVLNQPQSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSS
MRMCMGSRRSFICRMRCGNAPLDHLPLNRITTMRKRYRNGLGPVKEGEAQYAVVHCTGYI
KAWPPAGMTIPEEDADVGQGSKYCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGV
ITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTK
NREWMLIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPV
PSIPANVHEGGKSVEKPDAIFSQERDPRFAEMFAGITASDKKMMASASTAGNQQLYSQGS
PFQPGHSGKTFSSSVVHVPGVNDIQSSSSTGQNLTQISRQLNQSQVAWTGTRPPFPGQQI
PSQSGKAQSSPFGIGTSHTYPADPSSYSPLSSPATSSPSGNAYSSLANRSAGFAEGGQSS
GQFQGRPSEVWSQWQSQHHNQQSSDQHSHPQPNQTEVFQDMLPMPGDPTQGTGNYNIEDF
ADLGMFPPFSE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgccggcggcggtaaaccctcccgagatggcatcagacattcctggctcggtg
gccttgccggtggctccaatggcgagtggacaagtgaggatggcaggatccatgccttcc
agaggaggaaagcgtcgctctggaatggactttgatgatgaagatggggaggggcccagc
aaattttcaaggtatgatggtgatcaaatcactggtgataaggaaaagtttgcaagggag
aatcacagtgagattgagaggcgcaggaggaataagatgacccagtacatcacggagctg
tcggacatggtgcccacgtgcagcgccctggctcgtaagcctgacaagctgaccattctg
cgcatggctgtttcccacatgaaatccatgaggggcactgggaacaaatctactgatgga
gcttacaagccttcctttcttacagaacaggagctgaagcaccttatcctggaggctgca
gatgggttcctgtttgtagttgcagctgagacgggaagagtgatctatgtctcagactct
gtgactcctgtcctgaaccagccccagtctgaatggtttggcagcactttgtacgagcag
gttcatccagacgacgtggagaagctgcgagagcaactgtgtacatctgaaaactctatg
acaggacgaatcctggacttgaagacggggacagtaaagaaggaaggtcagcagtcctcc
atgagaatgtgcatgggatccaggcgctctttcatttgcaggatgagatgtggaaatgct
cctctggatcatttacccctgaacagaataaccaccatgaggaaaagatacaggaatggc
ctgggcccggtgaaagaaggtgaagcacaatatgctgttgtccattgcactggctatatc
aaggcttggccaccagcaggaatgactataccagaagaagatgctgatgtgggacaaggt
agtaaatactgcctcgtggcaataggaaggcttcaggtgaccagctctcccgtgtgcatg
gacatgaacggcatgtcagtccccacggagttcctgtccaggcacaactcggacggagtc
atcacctttgtggacccaaggtgcatcagtgtcattggctaccagccccaggatcttctg
gggaaagatattttagaattctgccatcctgaagatcaaagccatttgcgagagagtttc
caacaggtggtgaagctgaaaggtcaagtcctgtctgtgatgtatcgttttcgcaccaaa
aaccgggagtggatgctgatcagaaccagcagcttcacatttcagaatccttattctgat
gagatcgagtacatcatctgcaccaacactaatgtaaaacaacttcagcaacagcaagca
gaactcgaagtacatcaaagagatgggctgtcatcctatgacttatctcaggtgcctgtt
ccaagtataccagctaatgttcacgagggtggaaagtctgtggaaaagcctgatgctatc
ttctcccaagagagagatcctagatttgctgagatgtttgctggaataactgcttctgat
aaaaaaatgatggcctctgcatccacagcaggaaaccagcagctttactcacagggaagc
ccatttcagccaggacactcgggaaagactttcagttcatccgtggtgcatgtgcctggt
gtcaacgacatccagtcttcctcctcaacaggccagaacctgacacagatatcccggcag
ctcaaccagagccaggtggcctggacaggaactcgccctccttttccaggacagcaaatt
ccatctcagtctggcaaggctcagtcatctccctttggcattggaacaagtcacacctac
ccagctgatccatcatcatacagccccctgtccagccctgccacctcttctccaagtggg
aatgcctactccagcttagcaaaccgaagtgcaggctttgctgaaggtggccagagcagt
gggcagttccaggggagaccgtctgaagtgtggtcgcagtggcagagccaacaccacaac
cagcagagcagcgaccagcactcacacccacagcccaaccagaccgaggtgttccaggac
atgctgccgatgccaggggatccgacacagggaactggcaattacaacattgaagatttt
gctgacctgggcatgtttccaccattttccgagtag
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