Sylvia atricapilla (blackcap): 136367074
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Entry
136367074 CDS
T10263
Symbol
MYO5C
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04814
Motor proteins
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
136367074 (MYO5C)
mRNA cycle factors
P-body specific factors
136367074 (MYO5C)
Membrane trafficking [BR:
sati04131
]
Others
Actin-binding proteins
Myosins
136367074 (MYO5C)
Mitochondrial biogenesis [BR:
sati03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
136367074 (MYO5C)
Cytoskeleton proteins [BR:
sati04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
136367074 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136367074
NCBI-ProteinID:
XP_066184548
LinkDB
All DBs
Position
13:complement(12110723..12144027)
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHVQLEDGTELSYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDRGYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASATQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMMETQKTFALLGLKGDFQMDVFKMLAAILHLGNVEIAAVGDERSSISMEDKHLSIFCE
LLDLNCDKMARWLCHRKIVTTWEMVIKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYECEGFLEKNRDTVHEVLVEILKESKFHLCANFFQDCPVSVSPF
SSAINIKSARPALKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACILIQKRVRGWLQRRRFLSLR
RAAVTVQQYFRGQRTVRQAITARNLKETWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMREEQKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTNVASAHMNDVETIQKLESELEKLTAQKRTYEEKGXKYKEDSEQKILK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDELTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKTQLQQQIQQEIIVQDGLKMEVGQLTKQAEKIPELQKEIEL
LQTQKLDVEKQAQSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTVKLQEVSNRLHFELERDRTRRRSS
EAQNEVDIKEKESLKDTIQGIEGLSNGLMQDEDQDEVQSKIKQVTARLAVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKAEAHVPTVPKEYIGMMEYRKEDEERIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNATIDGIKQVVKEHSEDFEMLSFWLS
NTYHFLNCLKQYSGEEEFMKYNTPRQSKNCLKHFDLSEYRQILSDLAIRIYHQFIIVMEN
NIQHIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSAVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREDVPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccgttttctccatgtg
cagttagaagatggaactgaactgagttaccctgtagatccagctgctttgccaccacta
cgaaatcctgacatacttgttggtgaaaatgatctcactgccctcagttatctccatgaa
ccagctgttctacacaatcttaaaattcgttttgtggagtctaagcttatctatacatat
agtggaataattctggttgcaataaacccctataagcagctgccaatatatggagatgcc
attatccatgcatatagtgggcaaaatatgggggacatggatccacacatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctgggaagactgtgtctgcaaggtacactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacatgtggaggataaagtattggcatccaatccaata
actgaggctgtgggcaatgcaaaaaccacacggaatgataacagcagtagatttggtaaa
tacactgagatcagttttgatcggggttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtatttcagtcagaaaatgaaaggaactaccatatattt
taccagttgtgtgcatctgctacgcaacctgaatatgaacatcttaaattgggaagtgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagaaggggttgatgacaga
gcaaatatgatggagactcagaagacatttgccttactgggtctgaagggggattttcag
atggatgtatttaaaatgctggcagcaatcctgcacttgggcaatgtggaaatagcagct
gttggagatgaaagatcatccatcagtatggaggacaaacatctgagcatattctgtgag
cttctggatttgaactgtgacaagatggcccggtggctgtgccacaggaagattgtcacc
acctgggagatggtgataaagccgatgaccagagcccaggccgtcaacgccagggatgct
ctggcaaagaagatctactctcatttatttgacttcattgtggaaagaattaaccaagcc
ctgcaattccctggcaaacaacacactttcattggtgttttggatatttatggatttgaa
acgtttgatgtgaacagttttgaacaattttgtatcaattatgctaacgaaaaactacag
cagcaatttaacctgcatgtcttcaaacttgaacaagaggaatatatgaaagaagatatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagaatgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaacgcactctttgaaaagccaagg
atgtcaaacacctctttcatcattcagcactttgctgataaggtagaatatgaatgtgaa
ggatttctggaaaagaacagagatacagtacatgaagtattggttgaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagattgtccagtgtccgtttcgcctttc
agttcagctataaacatcaaatctgccagacctgctctgaaatcacccaacaaacagctc
cggactactgtgggcagtaagttccggaattctttgtctttacttatggtgacactcaat
gcaaccactcctcattatgtgagatgcataaagccaaacgatgagaaattgccttttgag
tttgattccaaaagagttgctcagcagctgagagcatgtggtgttttggaaactattcgg
attagtgcacagagctatccatccaggtggacttatattgagtttttcagccgctacagc
attcttatgacacagcaggaactctccataaatgacaagaaacagatttgcaagattgtt
ttgcagcggctgatccaggatcataaccagtatcagtttgggaggacaaagatatttttc
agagcagggcaggttgcttacctggagaagctgcgctccgacaagctgaggcaggcgtgc
atcctgatccagaagcgtgtgcggggctggctgcagcggaggaggttcctgagcctcagg
agggcggcggtcaccgtgcagcagtacttccgtgggcagcgcactgtcaggcaagctata
actgcaagaaatctgaaggaaacatgggcagctataattattcagaaatactgtcggggg
taccttgtgcgcagactttgccagctcatccatgtggctgctgtaacaatacaagcttac
acaagaggatttctagcaagaaaaaagtatcggaagatgcgtgaagagcagaaggctgtg
atcctccagaagtacgcccgtgcgtggcttgccaggcgcagattccagaacattcggcgc
tttgtgttgaacatccagctttcatacagagttcagcagctgcagaagaagatagaagag
cagagtagagaaaatcatggtttgctggaacgattgaccaatgtggcttcagctcatatg
aatgacgtggaaacaattcagaaacttgaatcagaacttgaaaaattaactgctcaaaag
agaacatatgaagagaaagggnaaaaatataaagaggacagtgagcagaaaatcttaaaa
cttgagaatcagaataaagaattacaagaacagaaggagaccttagaaataaaactccaa
gaaaaaactgaggaaatgaaagagaaaatggatgaactcacacagcaactcttcaatgat
gtacaaaaagaagaaaaccagcgaatgatacttgagaaaaatttccaaaaccagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagattctgaaagaagaaaaa
actcagctacagcaacaaattcagcaagaaattatcgttcaggatggcttgaaaatggaa
gtaggacagcttacaaaacaagcagagaaaataccggagttgcaaaaggaaattgagctg
cttcagacacaaaaattggatgttgaaaagcaggcgcagtcacagaagcgagaattgagg
gaaaagatgtcagaagttacaaagcagcttcttgaaagttatgattttgaagatgtaaga
agcagactctctacagaggatctggagcacttaaatgaggatggagaactgtggtttgct
tacgagggcttgaaaaaagccacaagagtattggaaagccatttccagtctcagaaagaa
atatatgagaaggagattgaaggcttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacagaaattattccgggaggaaaatgacataaatgatggcattcggcttgaa
gttagcaggctaacttcagaaaacctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaaattagatcttgaaaaccgtcttcaagagcagaccgtaaagttgcaa
gaggtgtcaaatcggctgcattttgagctagaacgggataggacacgaagacgatcttct
gaggcccagaatgaagtagacataaaagaaaaagagagtctgaaggacacaatccaagga
attgaggggctgagcaatggtttgatgcaagatgaagaccaggatgaagtacaaagcaag
ataaagcaagtgacagctcgacttgctgtggaaaacatggatcttgaagaaaagctagac
atgaaagacagaataataaaaaaattagaagatcagatcaaaactctgaccaagactatt
gaaaaagctgaagcccatgtgcccactgtgcccaaagagtacattggaatgatggagtac
agaaaagaggatgaagaaaggatcattcagaatctgatcctcgatttaaagccacgtgga
gttgtagttaatatgatacctggccttccagctcacatcctgttcatgtgtgtgagatat
gcagattacctgaacgatgctgacatgctgaagtcgttcatgaatgcaaccattgatggc
atcaaacaggttgttaaggaacattcagaagactttgagatgttgtccttttggctttcc
aatacgtatcattttcttaactgtctgaagcagtacagcggggaagaggaattcatgaag
tataacactccacgtcagagtaagaactgtttgaagcattttgatctctcagaatacaga
cagattctcagtgatttggccattcgaatatatcaccagttcattattgtaatggagaac
aacattcagcacataattgtaccaggcatgctggaatatgaaagtcttcaaggaatttct
ggcttgaaacctacggggttccgtaaacgttcttctagtatagatgacacggatacctac
actatgacctctatcttgcagcagctcagctatttttatagcactatgtgtcagaatggc
ttggactctgagctcctaaagcaggcagtgaagcagcttttctttctgattggagctgtc
accctcaacagtctcttcctccgcaaggacatgtgctcctgtaggaaaggaatgcagata
agatgtaatattagctacttggaagaatggcttaaggacaagaatcttcaaagcagcaat
gccaaagaaactttggagcccctgtctcaagcagcctggctccttcaggttaaaaagatc
acagatgatgatgccaaggaaatatgtgagcactgcacatctctttctgctgtgcagata
gttaagatcctgaactcgtacactccaatagatgactttgagaaaagagtgactccatca
tttgttcggaaagtccaggctatgctaaacaaccgtgaggatgttccacagctgatgctt
gataccaagcatctctttcaagtgacgttcccgttcaccccctctccacatgctttggaa
ctgatacaagtccccagcagcttcaaacttggctttctcacgagggtttaa
DBGET
integrated database retrieval system
