Sylvia atricapilla (blackcap): 136367111
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Entry
136367111 CDS
T10263
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136367111 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sati04990
]
136367111 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
sati04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
136367111 (THSD4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
136367111
NCBI-ProteinID:
XP_066184618
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All DBs
Position
13:complement(14447450..14662337)
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AA seq
1006 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQLVIPQPSIEHRKVPQRIEEQGDAAEDSGAGVPGLWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYRRPGRHFPASDRALPHREDSLSAYPGHVISAIRTS
VPLHRSEEQPWGGLRARNSSGQAGRAALRGSRHSQGPRHGARPDRRSRNRNPIGPGKYGY
GKVPYILPLQTDTGQQPQKLRRQRQSSRNHLFHQSPSLMNSYSQAAAPSLHHGNLYQEPG
GPQVGHQVLGPSVYQSPSFPVSQSLFHGSESSPQALQGQPQPQRAAAIVCIGAYKQYKLC
NTNMCPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVKGSQKCELNCRAIGYRFYVRQA
ETVIDGTPCEPNGTAICVAGQCKSIGCDDYLGSDKVIDKCGICGGDNTACKVVSGVFKHT
LTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGRSIINGNWAIDRPGRYEGGGTM
FTYRRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPGIHYEYIIPGDNVISPQLIAHR
RPGEPLNGQLGMPESTSREDEDLHRETDILTGQATGTFPVIQPGRFPSHQPENQVPAMQP
PRQNREHNWKQVGKTECTTTCGKGSQYPIFHCVNRITHEEVPEGYCDSSTKPIPEEEACN
LFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQIYANRTLTVQQYRCQHLEKPDTTSTCQ
LKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDVVDDEECNMKLRPNDIENCDMGP
CAKSWFLTEWSDRCSAECGDGIRTRSVVCMTNHVSSLPLEGCGNNRPSETTPCNNGPCAG
KVEWFAGGWTQCSTECGSGTQQREVICVRKTEGNFDVLNPYECSYLEKPPSQQSCYLKPC
GSKWFHTEWSTCSKSCEGGFRVREVRCLSDDMAASTQCDPQLKPEEKEPCNTQDCVPEID
ENCKDKYYNCNVVVQARLCVYTYYKTACCASCSRVANRQPGFLGRR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagactcctcagttccctagcagtgctgggattt
cagcttgtcatcccacagccttcaattgaacacagaaaggttccgcagaggatagaagag
caaggcgatgccgccgaggacagcggcgccggcgtgccggggctgtggggcagctggggc
ccgtggtccgcctgctcgcggagctgcagcggcggggtgatggagcagacgcggccctgc
ctccccgcctattaccgccgcccgggccgccacttcccggcctcggaccgggctctgccc
caccgcgaggactcgctgtccgcctaccccggccacgtcatctcggccatccgcacctcg
gtgccgctgcacaggagcgaggagcagccgtggggcgggctgcgggcgcggaacagcagc
ggccaggccgggcgggcggcgctgaggggcagccggcactcgcagggcccgcggcacggc
gccaggccggacaggagaagcagaaacagaaatcctattggtccaggaaagtatgggtat
ggaaaagtgccatacattttacctttacaaactgatactggtcagcagcctcagaagctg
cggagacagcgccagtcgtcaaggaaccacctcttccaccagagtcccagtctcatgaac
tcctacagccaggcagctgctccttcactgcaccacgggaatctttaccaagagccaggt
gggcctcaggtgggacaccaggtgctggggccctcagtttatcagtcaccttcgttccct
gtgtctcagagtctgttccacggcagtgagtccagccctcaggccctgcaggggcagccc
cagccacagagagctgcagccatcgtgtgcattggagcctacaagcaatataaactctgc
aacaccaatatgtgtcctgaaagcagcaggaatattagagaggtacaatgtgcatcatac
aataacaagccatttatgggtcgattttatgaatgggagccttttgcagaagtgaagggc
agtcagaagtgtgagctgaactgccgcgccatcggctaccgcttctacgtgcgccaggcg
gagacggtgatcgacggcaccccctgcgagcccaacggcacggccatctgtgtggcgggg
cagtgcaagagcattggctgtgacgactatctgggttctgacaaagtgattgacaagtgt
ggaatatgtggaggggacaacactgcttgcaaggttgtgtctggagttttcaaacacacg
ctaacaaatcttggctaccacaagatagtggaaattcctgaaggagctactaaaatcaac
attactgagatgtcaaagagcaacaactatttggccctgcggagccgctcgggacgctcc
atcatcaacggcaactgggccatcgaccgcccgggcaggtacgaaggtggagggacaatg
ttcacttacagacgccccaatgagatctccagcactgcaggggagtccttcttagctgat
gggccaacaaacgaagtccttgatgtctatatgatacatcagcagcctaacccgggtata
cattatgaatatatcattccaggagacaatgtcattagtcctcagttgattgctcacagg
aggccaggggagccactgaatggtcagttaggaatgccagaaagtacaagtcgtgaggat
gaggatttgcatagagagacggacattctcactggacaggcaactggaacttttccagtt
attcagccaggaagatttccttctcatcagccagaaaaccaggtgcctgctatgcaacca
ccaagacaaaaccgagaacacaactggaaacaggttggaaaaactgagtgcactacgaca
tgtgggaaaggatcacagtacccaattttccactgcgtcaacagaatcactcacgaggag
gtgcccgagggttactgtgacagcagcaccaaacccattccagaagaggaggcctgcaac
ctcttcccatgccctgctttctgggatataggggagtggtctgagtgcagcaaaacctgc
gggctgggaatgcagcaccggcagatcctgtgccggcagatctacgccaaccgcacgctg
acagtgcagcagtaccgctgccagcacctggagaaacccgacacaaccagcacctgccag
ctcaagatctgcagcgagtggcagatcaggacagagtggacctcatgttcagtgccttgt
ggagtggggcagaggactcgggacgtgaagtgtgtcagcaaccttggggacgttgttgat
gatgaggaatgtaacatgaagctgcggccaaatgacatcgagaactgcgacatgggcccc
tgtgccaagagctggttccttacagaatggagtgacaggtgctcggccgagtgcggggac
gggatccgcacacgctccgtggtctgcatgaccaaccacgtcagcagtttgcccctggag
ggctgtggcaacaacagaccctcggagacgactccctgtaacaatgggccctgcgcgggc
aaggtggagtggttcgctgggggctggacacagtgctctactgaatgtggtagtggaact
cagcagagagaagtaatttgtgttaggaaaactgaaggtaattttgatgttttgaacccc
tatgaatgttcatatttggaaaaacctcccagccagcaatcctgctacctcaaaccatgt
ggatctaagtggtttcatacagaatggagcacatgttccaagtcgtgtgaaggaggattt
cgggttcgggaggtgcggtgtctgtcggacgacatggcagccagcactcagtgtgatcca
cagctcaaacctgaggagaaggagccgtgcaatacacaggattgtgtccctgaaatagat
gagaactgcaaggacaaatactacaactgcaacgtggtggtgcaggcccggctctgtgtg
tacacctattacaaaacagcctgctgtgcctcctgtagccgtgtggccaacagacagcca
ggcttcctgggccgcagataa
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