Sylvia atricapilla (blackcap): 136367131
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Entry
136367131 CDS
T10263
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136367131 (TRPM1)
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
136367131 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
Glutaredoxin2_C
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
136367131
NCBI-ProteinID:
XP_066184661
LinkDB
All DBs
Position
13:complement(15264406..15299323)
Genome browser
AA seq
1535 aa
AA seq
DB search
MYIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMT
TGAWIFTGGVSTGVIRHVGDALKDHSSKSRGRICAIGIAPWGIVENKEDLIGKDVTRVYQ
TMSNPLSKLSVLNSSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQKINTRLGQGVPVV
GLIVEGGPNVISIVLECLREEPPLPVVICDGSGRASDILSFAHKYSEEGGIINESLRDQL
LVTIQKTFNYNRNQAHQLFVILMECMKKKELITVFRMGSEGQHDIEMSILTALLKGTNAS
APDQLSLALAWNRVDIARSQIFVFGHHWPPLGSLTAPDGTAPEKEKKSPAPQTKAGRGKG
KGKKKGGKAKEEPEEETDPRKLELLNWVNSLEQAMLDALVLDRVDFVKLLIENGVNMQHF
LTIPRLEELYNTRLGPPNTLHLLVRDVKKGNLPPDYHISLIDIGLVLEYLMGGAYRCNYT
RKSFRTLYNNLFGPKRPKALKLLGMEDDEPPTKGKKKKKKKEEEIDIDVDDPEVSRFQYP
FHELMVWAVLMKRQKMALFLWQRGEESMAKALVACKLYKSMAHESSESELVDDISQDLDN
NSKDFGQLAVELLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQM
LLTDMWMGRLRMRKNPGLKVIMGILFPPTILFLEYRSYDDYSYQTSKENEEGKEKEEENA
DANADAGSRKGDEENGKKKQPSLPIGTKIYEFYNAPIVKFWFYTISYLGYLMLFNYIILV
RMERWPSVQEWIVISYIVTLALEKVREILMSEPGKLSQKIKVWLQEYWNITDLVAISVFI
IGAILRLQNQPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVV
IMLVVLMSFGVARQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQIDRKSRIHTPCGD
NLYDDDGKRLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKF
QRYQLIMTFHDRPVLPPPMIIFSHIYIIIKRICCRCKKGDGDQDERDRGLKLFLNDEELK
KLYEFEEQCVEEYFQEKEDEQQSSNDERIRVTSERVENMSMRLEEVNEREHFMKASLQTV
DLRLSQLEELSGRMANALEKLAGIDKSELTYTRSRASSECDAAYLLRQSSVNSSDGYSMY
KYHISGDELTYDDSTTPMSPAMRKKAHSIGTKEDGADPRMLLPEHQTGLHTSSANAVTTA
DHSKSTLEIAQNVSRAHSGSGGLGSEKQGGFSSDGMIPQSVNQMNAVTNSQSVAGPDFQN
TQLKVERTKLEATISYPLDKSKAMRYFPPETFSACQTTMMKSRSFIFAQGGKLVGGVNNW
TSEYSTIMDQVCPSTIEQWATEWKYEVEQQLSEERPPEYPGLISEAERQAEEKQMDTDDD
SNVGEAGMSASYTSMPATVKAEKENLLSVKPERTSGFPSVRSKSLHSHSRKAKSVKDKLN
RPGHASSVTNLVVAFGSATEEQKTSQENASTETEC
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgtacatccgcgtgtcgtatgacactaaaccagattctctgctgcatctcatggtgaaa
gactggcaactggaactgcccaaactcctcatctctgtccatggaggcctccagaacttt
gaaatgcaaccaaaattaaagcaagtgtttggaaaaggtctgataaaggctgccatgacc
acaggagcttggattttcactggtggtgttagtacaggtgtcattcgtcatgtgggagat
gccttgaaagatcattcttccaaatccagaggacgaatatgtgccataggaattgcacca
tggggcattgtagaaaacaaggaagatctcataggaaaagatgtaacacgagtttaccaa
acaatgtcaaaccctctaagtaagctctctgtgctcaacagttcccacacccacttcatt
ctggcagacaacggcactttaggtaaatatggagctgaagtaaagttacggcgtcagttg
gaaaaacacatttccctccagaaaattaacacacggctggggcaaggtgttcctgtggtt
gggctcatagtagaaggaggtcccaatgtgatctccattgtcctggagtgtctgagggaa
gaaccccctctcccagttgtgatctgtgatggcagtgggcgagcgtccgacatcctgtcc
tttgcacacaagtattcagaagaaggagggataataaatgaatcccttagggaccagctt
ctagttaccatccagaaaacctttaactacaacaggaatcaagctcatcagctgttcgtt
attcttatggagtgcatgaaaaaaaaagaacttatcaccgtgttccgcatgggctcggaa
gggcagcacgacattgagatgtccatcctcactgctctcctcaaaggtaccaatgcatct
gccccagaccagctcagcctggctttggcctggaatcgtgtagacattgcacgcagccaa
atctttgtctttggacaccactggccacctttaggaagccttacagctcctgatggcaca
gctcctgagaaggaaaagaaatctccagcacctcagactaaagcaggcagagggaaagga
aaagggaagaaaaagggaggaaaagcaaaagaagaaccagaagaagaaacagacccaaga
aaacttgaactcctgaactgggtgaactccctggagcaggctatgctggatgcattggtc
ctggatcgagtggactttgtgaaactgcttattgagaatggagtgaacatgcagcacttc
ctgactatccctcgcctggaggagctttataatactagactgggtccaccaaatacgctg
catttgctagtcagagatgtgaaaaagggaaatcttccaccagattatcatatcagccta
atagatattggtcttgtcctggaatatctcatgggtggagcctatcgctgcaactatact
cggaaaagttttcggaccctttataataatttatttggaccaaagaggccaaaagctctt
aaactactggggatggaggatgatgagcctcccaccaaagggaagaagaaaaagaaaaaa
aaggaggaagagattgatattgatgtggatgatccagaagtcagccgcttccagtacccc
tttcatgagctgatggtgtgggctgtgctcatgaaacggcagaagatggccctgttcctt
tggcaacgaggggaggaatccatggccaaggcacttgtggcttgtaaactctacaagtct
atggcccacgagtcttcggagagtgagctggtggatgacatctctcaggatctggacaac
aactcaaaagattttggccagctggctgttgaactcttggatcagtcctataaacatgat
gagcagattgccatgaaactgctgacgtatgaactgaaaaactggagtaattctacctgc
ctgaagttggctgtggcagctaaacacagggacttcattgctcacacctgcagccagatg
ctcctgacagacatgtggatggggcgactgcgcatgcggaaaaaccccggccttaaggtt
ataatgggaattctcttccctcccaccatccttttcctagagtatcggagttatgacgac
tattcctaccagacatcaaaagaaaatgaggaaggcaaagaaaaagaggaggaaaatgcg
gatgcaaatgcagatgcaggctcccgaaaaggggatgaagagaatggaaagaaaaaacaa
ccgagtcttccaattggaacaaagatctatgaattctataacgcacctattgtcaaattt
tggttctacacaatatcataccttggttacttgatgttatttaattacatcatcctggtg
cggatggaacggtggccatcagtccaggaatggattgtcatctcctacattgtgaccttg
gctttggagaaagtcagagagattctgatgtcagagcctggcaagttaagccaaaaaatc
aaagtttggctccaggaatactggaatattactgacctggtggctatttcagtttttata
ataggagcaattcttcgcctgcagaaccagccttacatgggttatggaagagtgatttac
tgtgtagatatcattttctggtacattagagtactggatatctttggtgtgaacaaatat
ctgggaccttacgtcatgatgattggaaagatgatgattgacatgctgtactttgtggtc
atcatgcttgtggttctgatgagctttggggtagcccgccaggccatcctgcaccccgac
gaggagccctcctggagactggctcgcaacatcttctacatgccctactggatgatctac
ggagaggtgttcgctgaccagatagaccgtaagagtagaattcatactccttgtggggac
aatctttatgatgacgacggtaaacgcctccctccgtgcatcccaggggcctggctcact
cctgctattatggcctgttaccttttggtagcaaacatcctgttggtaaacctgctgatt
gctgtcttcaacaataccttctttgaggtaaaatcaatatccaaccaagtctggaagttc
cagcggtaccagctgatcatgacattccatgacagacctgtcctgccaccaccaatgatt
atcttcagccacatctacatcatcatcaagcggatctgctgccgctgcaagaagggggat
ggagaccaggacgagcgtgacaggggactgaagttatttctgaatgatgaagagctaaaa
aaactgtatgagtttgaagagcagtgtgtagaagaatacttccaggagaaagaggatgag
cagcagtcatctaatgatgagcgcatcagagttacctctgaaagagttgaaaatatgtct
atgaggctggaagaagtgaacgaaagagaacattttatgaaggcctctctgcagacagtg
gacctgcggctgtcccagctggaggagctctctggccggatggcgaacgctctggagaag
ctggcgggcatcgacaaatccgagctgacgtacacgcgctccagggcctcctcagagtgt
gatgctgcttacctcctgaggcagagcagtgtcaacagctctgatggctacagcatgtac
aaataccacatcagtggtgatgagctcacctacgatgacagcaccacgcccatgtcacca
gccatgcgtaaaaaagcccactctattggtaccaaagaagatggagcagacccaaggatg
ctgcttccagagcaccaaactggactccatacctcgagtgctaatgcagtcactacagca
gatcacagtaaatccacattagaaattgcacagaatgtttccagagcccattctggttca
ggtggtttggggagtgaaaagcaggggggtttcagtagcgatggaatgattcctcaaagt
gtgaaccagatgaatgctgttacgaacagtcagtcagtagcaggaccagattttcagaac
actcagttaaaagtagaacgtaccaagttagaagcaaccatctcttatcccttggacaaa
tccaaagcaatgcgctattttcctcctgaaactttcagtgcttgtcaaaccactatgatg
aagtcaaggagctttatatttgcacaaggtggaaagctggttggaggagttaacaactgg
acctcagaatatagtaccattatggatcaggtgtgcccttctacaattgaacagtgggcc
acagagtggaaatacgaagttgagcagcagctttctgaagagcgtcctccagaatacccc
gggttgatctctgaagcagaaaggcaagcagaggagaagcagatggacacagatgatgat
agtaatgttggtgaagcaggtatgagtgcctcttacacctctatgcctgccactgtcaag
gctgagaaggagaatttactgtcagtaaagccagaaaggacttctgggttcccatcagta
cgctccaagagtttgcacagccattcccggaaagccaagtctgtgaaggacaaattaaat
agaccaggacatgccagcagtgtaactaatttggtggtagcgtttggcagtgcaacagaa
gaacagaaaactagccaagaaaatgcatccacagaaactgaatgttaa
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integrated database retrieval system
