Sylvia atricapilla (blackcap): 136367180
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Entry
136367180 CDS
T10263
Symbol
BBS4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136367180 (BBS4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sati03037
]
136367180 (BBS4)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
136367180 (BBS4)
Cilium and associated proteins [BR:
sati03037
]
Primary cilia and associated proteins
BBSome
136367180 (BBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_11
TPR_16
TPR_17
TPR_14
TPR_12
TPR_CcmH_CycH
ANAPC3
TPR_9
TPR_6
TPR_Slam
TPR_15
ARM_TT21_2nd
TPR_7
PknG_TPR
ARM_TT21_4th
Wzy_C_2
TPR_20
NatA_aux_su
ARM_TT21_5th
ARM_TT21_N
ARM_TT21_C
ChAPs
TPR_MalT
Clathrin
HAT_Syf1_CNRKL1_C
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
136367180
NCBI-ProteinID:
XP_066184768
LinkDB
All DBs
Position
13:17841748..17876879
Genome browser
AA seq
570 aa
AA seq
DB search
MRGRQQPFPPCPARHGRAGSGGRSPWQPRPAAAMAEPPDATVSSSPAATEPTKPRPKKAP
ELPILERKNWLIYLLYVRRDYEECKAVIKEQLQESQGLCEYAVYVQALIFRLEGKIQESL
ELFQTCSILNPRSADNLKQVARSLFLLGKHKAAIEVYNEAAKLDEKDWEISHNLGVCYMY
LKHFNKAQDQLNNALELNRHDLTYMMLGKIHLLEGDVDKAIEVYKKAVEFSPENTDLLTA
LGLLYLQTGDYQKAFEHLGNVLTYDPGNYKATLAAGSMMQAHGDFDVALSKYKVVASSVP
ESPPLWNNIGMCFFGKKKYVAAVSCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFL
SAAINFQPKMAELYMLLAVALTNLEDIENARCSYEQAVALDKCNPLINLNYAVLLYNQGD
KEGALRQYQEMERKVTIARESSAPDFDPEMVEMAQKMGAALQVGESLVWTKPSKESKSKQ
KAAVSGKSSSQQPLGSNQALGQAMSSAAGYGKTMQLPPGAATPALPKKPPSLPLEPEQEQ
DSETSPEENSAPTGDKEQRKEKHQSQEAAE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagggggaggcagcagcccttcccgccatgccccgcgcgccatggccgcgccggaagc
ggagggcggtcgccatggcaaccccggcccgccgccgccatggcggagccgccggacgcc
acggtttcttcatcgccagcggctacagaaccaacaaaaccccgtcctaaaaaagcaccg
gagctgccaatcctagagaggaagaactggctgatttatctgctctatgtccgcagagac
tacgaggagtgtaaggctgtcatcaaagagcagctccaggagtcccaagggctctgtgaa
tatgctgtctatgttcaagctttgatatttcgcttggaggggaaaattcaagaatctctt
gaacttttccagacatgttccattctgaaccctcgaagcgctgacaacctcaagcaggtg
gcccgatccctgtttctcctggggaagcataaggcagccatcgaagtgtacaatgaagca
gcaaaactcgatgagaaggactgggagatcagccacaacttgggtgtgtgctacatgtac
ctgaaacacttcaacaaggcacaagaccagctcaacaatgccctggagctcaacagacac
gatctgacctacatgatgctgggcaaaattcatctcttggagggggacgtggataaagcc
attgaagtatataagaaagctgtagagttttctccagaaaacacagacctcctcacagcc
ctgggcctactgtacctgcagactggggattaccagaaggcttttgagcaccttggaaac
gtgctgacctatgacccaggcaactacaaggccactctggctgctggcagcatgatgcag
gcccacggggatttcgatgtcgccctgtccaagtacaaggtggtggccagcagtgttcct
gagagccctcctctctggaacaacattggcatgtgcttctttgggaagaagaaatatgtg
gcagctgtcagctgcctgaagagggcaaactacctggctccctttgactggaagattctg
tacaacctgggcttagtgcacctcaccatgcagcaatatgcctcagccttccacttcctc
agtgctgccatcaacttccagcccaagatggcagagctctacatgctcctggcagttgct
ctgaccaaccttgaagacatcgagaatgccagatgttcctatgaacaagctgtggccttg
gacaagtgcaaccccctcatcaacctgaactacgctgtcctgctctacaaccagggcgac
aaggagggggccctaaggcagtatcaggagatggagaggaaggtcaccatcgccagggag
agcagcgcacccgacttcgaccctgagatggtggagatggcccagaagatgggagctgcc
ctgcaggtcggggagagcctggtgtggaccaagccttctaaagagtccaaatccaagcag
aaagctgctgtgtcggggaaatccagctctcaacagcctttgggctccaaccaggccctg
ggtcaagccatgtcctctgctgcaggatatgggaaaaccatgcagctccccccaggtgct
gcaacaccagctctaccaaaaaagcctccctccctgcctctggaaccagaacaggagcag
gactcggaaacgagccctgaggagaactcagcacccacaggggacaaggagcagaggaag
gagaagcaccagagccaggaggcagcagagtag
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integrated database retrieval system
