Sylvia atricapilla (blackcap): 136367218
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Entry
136367218 CDS
T10263
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136367218 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136367218 (SIN3A)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
136367218 (SIN3A)
REST complex
136367218 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
136367218 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
136367218
NCBI-ProteinID:
XP_066184831
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All DBs
Position
13:complement(18837526..18868891)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHPAPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQ
PAPQPTPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENSNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtcacccgtgtatgcgtcgcagcagagacgtatc
accagcagcaccgaggctttcccccaccagcaccgcgtgctcgccccggccccgccggtc
tatgaggccgtttccgagaccatgcagtcggccacggggatccagtactccgtaactccc
agctaccaggtgtcggccgtgccgcagagctcgggcagccacggcccggccatcgccgcc
gtgcacagcggccaccaccaccccgcgcccgtgcagccccacggcagccaggtggtgcag
agccacacgcaccccacgcccccggccgtgcccgtgcagggccagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctacagtttggtagtcag
ccacaggtctacaatgacttcttggatattatgaaggaatttaaatctcagagcatcgac
actccgggggtcatcagccgtgtgtcgcagctcttcaagggccacccagacttgatcatg
ggtttcaacaccttcctgccacctggctacaagattgaggtgcagaccaatgacatggtg
aacgtgaccaccccagggcaggttcaccagatccccacccatgggctgcagccccagccg
cagccgcagcccccgcatccgtcgcagccttcggcgcagtcgaccccaacaccagcacag
ccggcgccgcagcccacacctgccaaaatcagcaagccatcgcagttgcaggctcatacc
cctgccagccagcaaacgccgccgatcccgccgtacgcgtcgccgcgctcgccgcccgtc
cagccacacacacctgtgacaatctctctgggcaccacaccatccctgcagaacaatcag
cccgtggagtttaatcacgccatcaactacgtcaacaagatcaagaatcggttccaggga
cagccagacatctacaaagccttcctggagattctccatacgtatcagaaagagcagcgt
aatgccaaggaggcaggagggaactacacaccagctctgacagagcaggaggtctatgcc
caggtggctcgcctcttcaagaaccaggaggatctgctctcggaatttgggcaattcctg
cctgatgccaacagctctgtgctgttgagtaagacaactgcagagaaggtggaatctgtc
aggaatgaccacgggggcacagtgaagaagccacagctcaacaacaagcagcagagaccc
aaccagaacggctgccagattcgacggcactcgggcactggagcaacccctccagtgaag
aagaaaccaaagctgcttggtttgaaagaccagtctttggcagaagccagcaaacatggt
gtggggacagaatctctcttctttgagaaggtgcgcaaagctctgcgtagcacagaagcc
tacgagaacttcctgcgctgcctggtcattttcaaccaggaggtgatctcccgggctgag
ctcgtgcagctggtttctccattcctggggaaattcccagaactgttcacttggtttaaa
aactttctgggatataaggagtctgttcacatggagacatatccaaaggaacgggctact
gaggggattgccatggagattgactatgcctcctgcaagaggctgggctccagctaccga
gccttgcccaagagctaccagcaacccaagtgcacagggcggactccgctgtgtaaggag
gttttgaatgacacctgggtctccttcccgtcctggtctgaagattccacatttgtgagc
tccaagaagacacaatatgaagagcacatctacaggtgtgaggatgagcgttttgagctg
gatgttgtcttggagaccaacctggcaacgatccgtgttctcgaggcaatccagaagaag
ctgtcacgcttgtctgcggaggagcaggccaaattccggctggacaacaccctggggggc
acctcggaggtgatccaccgcaaggctctccagaggatatatgctgacaaagcagctgac
atcatcgatgggcttcgcaagaacccgtctgtggctgtccccattgtgctgaaaaggtta
aagatgaaagaggaagagtggcgagaagcccagagaggatttaataaagtctggcgagag
cagaatgagaagtattacctgaaatccttggaccaccagggcatcaacttcaagcagaat
gataccaaggtcctaagatcaaagagtctcctcaatgaaattgaaagcatttatgatgag
aggcaagaacaggcttcagaagacaatgctggagtgcccacaggcccacacctctcacta
gcctatgaagacaagcagatcctggaagatgctgcctctctcatcatccaccacgtgaag
cggcagacaggaatccagaaagaggacaagtataaaatcaagcagatcatgtatcacttc
attccagacctgctgtttgcgcagcgaggtgaactctcagatgtggaagaggaagaagaa
gaggaaatggatgtggacgaagctaccggggctgcaaaaaagcacaacggtgttgggggt
agtcctcccaaaaccaagctgatgttcaacaacacgacagcccagaaactgcgaggcatg
gatgaggtctacaacctcttctacgtgaacagcaactggtacatcttcatgaggctgcac
cagatcctgtgcctgcggctgctgcggatctgcacccaggccgagcggcagatcgaggag
gagacgagggaacgggagtgggagagggaagtgctgggcataaagcgagacaagagtgac
agtcctgccatccagctgcgactgaaggagcccatggacatcgatgttgaggattattac
ccggccttcctggacatggtgcgcaacctcctggacgggaacatggactcgtcgcagtac
gaggactccctgcgcgagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgatccagagcatcgtccgacagctccagcacatcgtgagcgatgagatctgtgtgcag
gtgacagacctgtacctgtcagagaacagcaacggggccaccggaggtctcctcgcctcg
cagtcctcccgcacgctcctggaggccgcctaccagcgcaaagccgagcagctcatgtcc
gaggagaactgcttcaagctgatgttcattcagagcagaggtcaagttcagttaaccatt
gagctgctggacacagaagaggaaaactctgatgaccctgtggaagcagagcgctggtcc
gactacgtggagcggtacgtcaactctgattctacctcccccgagctccgcgagcacctg
gcccagaaacccgtcttcctgcccaggaatctgaggaggatccgcaagtgtcagcggggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaagaagtccatggagaatgtg
gagagcctggacaagctggagtgtaaattcaagctgaactcctataagatggtgtacgtg
atcaagtcggaggattacatgtacaggaggaccgcgctgctgcgagctcagcagtcccat
gaaagggtgagcaagcggctgcaccagcgcttccaggcctgggtggacaaatggaccaag
gagcatgtgccccgcgaaatggcagccgagacaaacaagtggctcatgggtgaagggttg
gagggcttggtgccctgcaccaccacctgtgacacagagaccctgcactttgtcagcatc
aacaagtaccgcgtcaaatacggcacgatattcaagacaccctag
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