Sylvia atricapilla (blackcap): 136367223
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Entry
136367223 CDS
T10263
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
sati Sylvia atricapilla (blackcap)
Brite
Proteoglycans [BR:
sati00535
]
Cell surface proteoglycans
Others
136367223 (CSPG4)
Lectins [BR:
sati04091
]
C-Type lectins
Others
136367223 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136367223
NCBI-ProteinID:
XP_066184837
LinkDB
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Position
13:complement(18905636..18919299)
Genome browser
AA seq
2308 aa
AA seq
DB search
MPLADASRTVRLHLQLLTSQGNGLLFLAAGQPDHLLLQLQAGRLQARLQLGLEKVTLQSP
AGLQLNNLAVHDVELLVEDGRMTLTIDGLFNSSADIAGPARELDIQHGLYAGGTGSLDLP
YLAEASPPFRGCLHLVTFNGLDVLSHLSADGSSKTFHRVQEGCSTQFSADPEEPFGFPGP
HSYVAFPTWDARQEATIEFVITTSITQAPLIYHAGLENDFFYLEISNGRLRGFVEKGNGI
IVLHNNVFISDEQQHYVKVHTDKHKFEILIDYYASSTSNRGINNYLDLQGNLFIGGMDEK
ALQRLREHHLSFVSLWTMTNHSFVGCLEDLRINLQRRSLQDAVITKDITAGCGKQDHYWD
YEEVYEQDEASTSPPPNGFSGAPGLVVEPCRPDSSFPPAFANISRLLHVSPLIVSEGGMA
YLEWKHTQPTVDLSLANIRQSQILFSITNDPRHGQLELDVPGSRSRRKFTLLDIVNRKVR
YIHDGSEGPMDQLMLEVTVTTQQGVPECLRQGQVYLLPIMINPVNDAPQVIFPRGNHMTI
LRHTRKHLTTDILQVLDDDSSCEDLEFQLHGQQMEEGYVELDFHPGVPIEEFSCRDLEAG
NVVYVHQGGTNLQLTLQVSDGTVPSPIATLRILAIDPEIRLVNNTGLSLSQGGAARITTA
NLSVETNAVEQRVSILYVLTEPLKYGEVQKQGSMGVEWKKVESFHQQDLEQGRIQYFSTD
SEHRLEDSVEEVRFKVQVGQKLLPNNTFLIRIKRATIKMRTMAPLQMKNKRHRNITSKEL
EAMLEDPNSALVPFHYKIIQAPKKGNLELLGNRLTEGFGFTEEDLQGNHLSYSVTIRNSQ
QAEDFFQFRVHAGEQHSPVYTYRISIGGDPDAPTLTNMLLTVQEGGQAVISKDHLFVQSV
NSMDYVYEVIEGPAHGRLAWAASHGWASREEITEFSNDDILQRRLLYQHDDSETLEDDIP
FVAFRQGEGSAESEAEEVRGVFRVSIQPINDHSPVRAVNRVFNVVRNGQHLLTTDDIAFT
DKDSGFSDTQLVLTRKDILFGSIVSVDDRSHQVYRFTQDDLRKKKILFVHSGADRGWIQL
QVSDGLHQTTALLEVQASEPYIKIVNNTGLVIHQGTQGSIDSSVLSLETNMDIRSDEEIR
FLITTPPRWGTVLRGEQPVMAFSQRDLLAGEISYRHNGSRNSRDELQFTVEANEVAVEDT
LAISVFLDTHPSPLSMVNHREIYVFQGEAAGIKEEDLLVTHEEISSQDIVYLVSSPPASG
FLTMLQHSQDMNEQPSLDSIQSFTQEDINSGRVLYLHSKPNEERDQFVLDITARNADPLE
GVVVSLVVLPITVPLDVHNITVPGGGSATISSSILHIPNAYYPALGVEFSVLEPPRFGTL
LSSQRPEQGGLHSFTWSEVENQQIQYRQDGPRSLTDSFTILANASEVSRQSHPRTLFITI
LPRGTKGPRLKVNAGLQLREGATAVLSAHILRAEDEDSPAEEVTYSIQPPANGKVVLRTA
PSTEVQRFTQAQIDNGLVLFVHQGPLDGGFAFDLWDGENLSPGHFFLIRAQREPIISLAR
KQSLTVCPGALQPITSQNLQAMSNSPTSSSTLYYSIEQAPRLGRLTTSQGEEIRNFTQAQ
VDSNLIFYQHEMPDKPFWLAQDAIRFRVVTPTTISDSFILLVLISFEENCPQRLTQLWKN
AGLQLPSAQQAEIDTLVLDASNLLSQILVPERAGYDVVFLVTEAPAHGQLLVAGVPLEQS
RPFFLQSDLAARRLVYAHSGDSTSKDQFRFKAWLQPQEQQSVRPPQDGVVISEAFNITVT
SSTKSPQVVKRQEVLQAPQGSVVTLSQEYLDVADPLVSPQEMVYSVLQRPLAGHVASAHD
PREPISRFTQADVNAGHVVFVATGSSTPGSLALRLSSGHHPPIQTSLEIEVLPALSTTAV
LEVPQDLNRALVSHHHLLGATPRGAGNVLYRITRDPRFGQVQVNQKPSRGFSQKQLDRRE
VTFTFSDLRSPEDDFQFVAISWAGNRSGVVNVTVRAAVKTRVGSLWPRGTTALLDTSVLD
ASGLANHTNSIPVFKVRRAPRASRLVRVSRDPGQPASPIETFSQSELEQGLVGLEMLDAG
DTQQSLQRDSFSFELVAAGVPPALASLEYSIEPYNASKSYGVTLLRVPLAPSPPVPHGTA
RSSPNASELGVPPTPWLAPSATTSPSPGAGGTFLSFIEANMFSIIIPICLIFLLLALILP
LLFYLHKRNKTGKHNVQGTPASKAKNGAVPDHETFRRTDPSQNIPLTTVTSLEGKGTGPP
PSGAPPDPELLQYCRTSNPPLKNNQYWV
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggcggacgcctcgcgcacggtgcggctgcacctgcagctgctcaccagccag
gggaacgggctgctcttcctggctgccggccagcccgaccacctcctgctccagctgcaa
gctggccgcctgcaggccaggctgcagttgggcttggagaaggtgaccttgcagtcccca
gcagggctgcagctcaataacctggcagtccacgatgtggagctgctggtggaagatggc
aggatgacactgaccatcgatggcctcttcaacagctccgcagacatcgcggggccagca
agggagctggacatccagcacggcctctatgccggcgggacgggcagcctggacctgccg
tacctggccgaggccagccctcccttcaggggctgtcttcacttggtgacattcaatggc
ctggatgtcctctcccatctgtctgctgacggcagctccaagaccttccaccgtgtccag
gaagggtgcagcacacagttctctgcagaccctgaggagccgttcgggttcccggggccg
cactcctacgttgcttttcccacctgggacgcaaggcaggaagcgaccattgagtttgtg
ataacgacgagcatcacccaggcacccctcatctaccacgcagggctggagaatgacttc
ttctacctggagatctccaacgggcgcctgcgagggtttgtggagaaggggaacggcatc
atcgtcctgcacaacaacgtcttcatcagcgacgagcagcagcactacgtcaaagtccac
acagataaacacaagtttgagatactgatagattactatgcttcatccacctccaaccgg
ggcatcaacaactacctggaccttcagggaaacctcttcattggaggtatggatgaaaaa
gcgttgcaaaggctgagggagcaccatctgtctttcgtctctttgtggaccatgaccaac
cactcatttgttggctgcttggaggacctccggataaacctgcagaggaggagcctgcag
gacgccgtgatcacaaaggacatcacagcaggctgtgggaagcaggaccactactgggac
tacgaggaggtgtacgagcaggatgaggcatccacctccccacctccaaacggcttttcg
ggagcaccgggcctggtggtggaaccgtgccggcccgacagcagcttcccccctgccttt
gccaacatcagcaggctgctgcacgtcagccccctcatcgtctcggaggggggcatggcc
tacctggagtggaagcacacccagccaacggtagacttgagcctggccaacatccgccag
tcccaaatcctcttcagcatcaccaatgaccccaggcacggccagttggagctggacgtt
cccgggtccaggagcagaaggaagttcactttgttagacattgtgaatcggaaggtcagg
tatatccacgatggctccgaggggcccatggaccagctgatgctggaggtgacagtgacc
acccagcaaggggtcccagagtgcctgcggcaggggcaggtgtacctgctgcccatcatg
atcaaccctgtcaacgatgccccacaggtgatcttcccccgcgggaaccacatgacaatc
ctgaggcacacacggaaacacctgaccaccgacatcctgcaggtcctggatgatgactca
tcctgcgaggacctcgaattccagctgcatggtcagcagatggaggagggttatgtggag
ttagacttccaccctggagtgcccattgaagagttctcctgcagggacctggaagctggc
aatgtagtctacgtgcaccagggtgggacaaatttacagctcaccttgcaggtgagtgat
ggcaccgtcccgagccccattgccaccctgaggatcctcgccattgatcctgaaatccgc
ctggtcaataacaccggcctctccctctcccaaggaggggccgcacgcatcaccacagcc
aacctgtcagtggagaccaacgctgtggaacaacgggtctccatcctgtatgtcctcacg
gagcctctgaagtatggtgaggtccagaagcaagggagcatgggagtggaatggaaaaaa
gtcgagtccttccaccagcaagacctggagcaagggcgcatccagtattttagcacagac
tcagagcaccggctggaagacagcgtggaggaggtgaggttcaaagtccaggtggggcag
aagctcttgccaaacaacaccttccttataaggattaagagagccaccattaagatgagg
accatggctcccctccagatgaagaataagcggcacagaaatatcaccagcaaggagctg
gaagcaatgttggaagatccaaactctgccctggttcccttccactacaagatcatccag
gctcccaaaaagggaaacctggagctgcttggcaacaggctgactgaaggctttgggttt
actgaagaggacctgcagggaaaccacctgagctacagcgtgaccatcaggaactcgcag
caagccgaggacttcttccagttccgtgtccatgctggtgagcagcactcgcccgtctat
acctacagaatcagcattggtggggaccctgacgcaccgactttgaccaacatgctcctg
accgtgcaggaaggcggacaggctgtcatctccaaggatcacttgtttgtgcagagcgtg
aacagcatggactatgtctatgaggtgattgaggggccggcacacggcaggctggcctgg
gctgcgtcccacggctgggcctccagagaggagatcacggagttcagcaatgacgacatc
ctccagcgccggctgctgtaccagcacgatgactccgagacgctggaggacgatatcccc
tttgttgccttcaggcagggtgagggcagcgccgagtcggaggccgaggaggtgaggggc
gttttcagggtctccatccaacccatcaatgaccacagccctgtccgggcagtgaacaga
gtcttcaacgtggtgcgcaatgggcagcacctgctgaccaccgacgacatcgccttcact
gacaaagactccggcttctccgacacgcagctggtgctgaccaggaaggacatcttgttt
ggcagtattgtgtctgtcgatgacagaagccaccaggtctatcgattcacacaggacgac
ctgaggaagaagaagatcctctttgtccattctggggctgaccggggctggatccagcta
caggtctcagatggcctccaccaaaccacagcgctcctggaagtgcaggcatcagagccc
tacatcaaaatagtcaacaacaccggtctggtcatccaccagggcacccaagggagcatt
gactcctctgtcctcagcctggagaccaacatggatatcaggtctgatgaagagatacgg
ttcctgataaccacccccccaaggtgggggaccgtgctgagaggggagcagccagtcatg
gccttctcccagagggacctgctggcaggagagatctcctaccgccacaacgggagcagg
aacagccgggatgagctccagttcactgtagaagcaaatgaggtggcagtggaggacacg
ctggccatcagtgtgttcctggatacccatcccagccccttgagcatggtcaaccacagg
gagatctatgttttccagggggaagcggctgggatcaaggaggaggacttactggtgacc
cacgaagagatatcttcccaagacatagtctacctggtgagcagccccccagcatctggc
ttcctgacaatgcttcagcacagccaggacatgaatgagcagcccagcctggactccatc
cagtccttcacccaggaggacatcaacagtggcagagtcctctacctgcactccaagccc
aacgaggagcgtgaccagtttgtcctggacatcacagcccgcaatgcagaccctctggag
ggggtggtggtcagcctggttgtgcttcccatcaccgtccccttggatgtccacaacatc
acggtgccaggaggtggctctgccaccatctcctcgagcatcctccacatccccaatgcc
tactacccagctctcggcgtggagttcagcgtgctcgagccaccccgctttggcaccctc
ctgagcagccagcggcccgagcagggcgggctgcacagcttcacctggagcgaggtggag
aaccagcagatccagtacaggcaggatggtccccgatccctcaccgacagtttcaccatc
ctggccaacgcctccgaggtgtcccggcagagccatccccggactctcttcatcaccatc
ctgccccgcggcaccaaggggccgcggctgaaggtcaacgccggtttgcagctgcgagaa
ggtgccacggctgttctcagcgcccacatcctgcgtgccgaggatgaggactccccagcg
gaagaggtgacctattccatccagcccccagccaacgggaaggttgtgctgaggacagca
cccagcactgaggtccagaggttcactcaggcccagatagacaacggcctcgtcctcttt
gtgcaccaaggacccctggatggcggcttcgccttcgatctgtgggatggtgagaaccta
tctcctgggcacttcttcctcatcagggcacagagagagcccatcatcagcctggccagg
aagcagagcctcactgtctgcccaggtgccctacagcccatcaccagccagaacctgcag
gcaatgagcaacagccccaccagctccagcactctgtactacagcatcgagcaagcccca
cgcctgggcaggctgaccacctcacagggggaggaaatcaggaacttcacccaagcccag
gtggacagcaatctgattttctaccagcacgagatgccagacaagcccttctggctggcc
caagatgccatccgcttccgtgtggtcactcccacgaccatctcggattctttcatcctc
ctcgttctgatctccttcgaggaaaattgtccccagcgcttgactcagctttggaaaaac
gcaggtctgcagctcccaagtgctcagcaggctgagattgacaccttggtgttggatgcc
tccaacctcctgagccagatcctggtccctgagagggctggatatgatgttgtcttcctg
gtgacggaggcaccggctcatggacagctcttggtggccggtgtgcctctggagcagtca
cggccctttttcctgcagtcagacctggcagcgaggcgtttggtgtacgcccacagcggg
gacagcacctccaaagatcagttccgttttaaggcttggctccagccccaggaacagcag
tctgtacgtcctccacaggatggggtggtcatctctgaagcattcaacataacagtgacc
agcagcaccaagtcaccgcaggtggtgaagcggcaagaagtgctgcaggccccacaaggc
tccgtagtcaccttgtcacaggagtacctggatgtggcagacccactggtgtccccacag
gagatggtgtacagcgtcctccagagacccctcgctggccacgtggccagcgcacacgac
ccacgggagcccatcagccgcttcacccaagcagatgtcaatgctggccacgtggtgttt
gttgccaccgggagcagtaccccaggctccttagccctgaggctctccagtggccaccac
ccacccatccagacctcactagagatcgaggtgctgcctgccctgagcaccactgcagtg
ctggaggtgccccaagacctgaacagggcccttgtgtcccaccatcacctgctgggtgcc
acaccacgaggggcaggtaatgtcctgtacaggatcaccagggaccccagatttggacag
gtgcaagtcaaccaaaagccatcgcggggcttctcacagaagcagctggatcgcagggag
gtgacgttcaccttcagtgacctcaggtcgcccgaggatgacttccagttcgttgccatt
tcatgggcagggaacaggagcggggtggtgaatgtgactgtccgtgcagcggtgaagacc
cgagtgggcagcttgtggccccgaggcaccacagccctcctggacaccagtgtccttgat
gccagtgggctggccaaccacaccaacagcatcccagtcttcaaggtccgcagggcgccc
cgtgccagccgtcttgtgagggtatccagagatccgggacaacccgcctccccaatcgaa
acgttcagccagagtgagctggagcaagggctggtggggctggagatgctggatgctggg
gacacccaacaatccctgcagagggacagcttttcctttgagctggtggctgctggcgtg
ccacccgcgctggcatccctggagtacagcatcgagccctacaatgcctcaaaatcctac
ggtgtcaccctgctcagagtcccgctggcaccctcacccccagtgccccatggcacagcg
cgaagcagccccaatgccagcgagctgggcgtgcccccgactccctggctggcccccagt
gccaccactagccccagccccggggcggggggcaccttcctcagcttcattgaggccaac
atgttcagcatcatcatccccatttgcctcattttcctgctgctggccctcatcttgccc
ctgctcttctacctgcacaagcgcaacaagaccgggaagcacaacgtccagggcactccc
gcctccaaggccaagaacggggccgtgccagaccacgagaccttccggaggacagacccc
agccaaaacatccccttaacgactgtcacctccctggagggcaagggcacgggtcccccg
ccctcaggggcacctccagaccccgagctcctccagtactgccggacttccaaccccccg
ctgaaaaacaaccagtactgggtgtga
DBGET
integrated database retrieval system
