Sylvia atricapilla (blackcap): 136367298
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Entry
136367298 CDS
T10263
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136367298 (CDX1)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
136367298 (CDX1)
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GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
136367298
NCBI-ProteinID:
XP_066184914
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Position
14:12042716..12054294
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AA seq
259 aa
AA seq
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MYVGYLVDKDTNMYPSPVRHPSLNLNPQNYVPGPPQYSDFASYHHVPGINNDLHHGQPAA
AWGSPYTPAKEDWHSYGTTATPSTASPGQFGFSPPDFNPIQPPGSGLLPPPISSSVPQLS
PNAQRRTPYEWMRRSIPSTSNNGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAVALGLTERQVKIWFQNRRAKERKVNKKKLQQQSQPTSTTTPTPPAVSTLGPIGGLCSS
NAPSLVSSSPLTIKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtaggatatcttgtggataaggacaccaacatgtatcccagcccggtccggcac
cccagcctcaacctcaacccccagaactacgtgcccggacccccgcagtactcggacttc
gccagctaccaccatgtgccggggattaacaacgacctgcaccacgggcagccggcggct
gcctggggctctccctacacccctgccaaggaggactggcattcctatgggaccactgcg
acgccttccaccgccagcccgggccagtttggattcagccccccagattttaaccccatt
cagcctccgggctctggactcctgcctccacccatcagcagctcggtcccccagctctcc
cctaatgcccagagacgcaccccgtatgagtggatgaggcgcagcattcccagcaccagc
aacaacggcaagaccaggacaaaagacaagtaccgggtggtgtacacggaccaccagcgc
ctggagctggagaaggagtttcactacagccgctacatcaccatccgccgcaaggccgag
ctggccgtggccctcgggctgactgaacggcaggtgaaaatctggtttcagaatcggagg
gcgaaggagaggaaggtgaacaagaagaagctgcagcagcagagccagcccaccagcacc
accacgccgaccccaccagctgtcagcaccctgggacccatcggaggcctctgcagcagc
aatgcccccagcctcgtctcctcctcgccgctgacgatcaaggaagaattcatgccttaa
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integrated database retrieval system
