Sylvia atricapilla (blackcap): 136367360
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Entry
136367360 CDS
T10263
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136367360
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Protocadherins
136367360
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
136367360
NCBI-ProteinID:
XP_066184997
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All DBs
Position
14:complement(2847109..2853212)
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AA seq
960 aa
AA seq
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MGAGEGSGRGQLFLRSLLFLLLAGPPGRHPARGQLRYAVPEELEHGAFVANLGEDLGLDV
STLSARRFRIVSRAGARQHLEVNLENGILFVNERIDREEVCEAGGTCLLHLQLLVESPLE
LYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYRLSPN
GFFSLEVQTRSDASKFAELVLERALDREQQRVHRVLLTALDGGFPERSGTAHILVTVLDA
NDNVPAFDQPSYGVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRVRELFHI
EPRSGQVLLKGRLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSV
STPVLEDAPPGTVIAVISVLDRDSGDNGRVSCEVGPNVPFELRSSFRNYYTLVTTQALDR
EVVPEYNVSITARDMGSPALLTRSTLTIPVSDVNDNAPRFLQPSYSVYVMENNAPGASIC
SVSALDPDCQQNAYLSYSIAEGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQV
QAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSARPGYLVGTVSA
VDADAGLNSRLSYQLLQATDFTLFSVAPDTGELRTLRSFLEQDASRQQLVVQVRDGGQPA
LSATVSLLLSVVETMPQTLSDFSEFSLPPEVSSSSPLTLYLLVSLGSISFTFLLAILILT
AIRCRGERRSRQGDSCSPPRCHCCPGSRPSSDGLKTSNLTAQAPAGSAAATCLDVPAGGP
PGYCYKVCLGPESAQSDFMFLKPCSPPRNNEKDPGKRSRPEQHLQVSKEAKQPNTDWLPP
GTQRPALKSSQSLEDVGEIRRALQKEHERLCTLVTPVSEFQKASAGPNSIWTPQYSPLYP
ALDYQHNVYIPGTPTLLSSKDGPLFPGRENKNSFSTFGKRKKMTTYCDMHDSVVINNDLK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgggggccggggaaggctccggccgggggcagctcttcctccgctccctcctcttcctc
ctcttggccgggcccccggggcgccacccggcgagggggcagctgcgctacgccgtgccg
gaggagctggaacacggagccttcgtggccaacctgggtgaggacctggggctggatgtg
tccactctgtcagcgcggaggttccgcatcgtgtcgcgggccggggccaggcagcacctg
gaggtgaacctggagaacgggatcctctttgtgaacgagcggattgaccgggaggaggtg
tgcgaggccgggggcacctgcctgctccacctgcagctcctcgtcgagagcccgctggag
ctctaccgcgtcgaggtggaggtgctggacatcaacgaccacgcacccaccttcccttgg
caggaatatgtgctggaggtggccgagtccgccgtgctcggcgcccgcttccccctggag
agcgcccaggatcccgacgtgggtaccaactctgtgcacacctaccgcctcagccccaac
ggcttcttttccctggaggtgcagacacggagtgatgccagcaagtttgcagagctggtg
ctggagcgtgccctggaccgcgagcagcagcgtgtgcaccgggtgctgctcacggctctc
gacggcggcttccccgagcgctcaggcacggcacacatcctcgtcacggtgctggacgcc
aacgacaacgtgcctgcctttgaccagccctcctacggtgtgagccttcctgaggatgct
cctgctggcactctggtcatccagctcaatgccactgacctggatgagggccccaacggg
gagatcgagtactccttcagtgggcacgcaccaccgcgtgtccgggagctcttccacata
gagccccggagtgggcaggtgctgctcaagggccgcctggactacgagcgggccagcctc
cacgagctctacgtgcaagccaaggaccgcggaccctcagctgtggctgtgcactgcagg
gtgcttgtgcacctccttgacgtcaatgacaacgcgccagaggtgaccctcacctctgtg
tccacccctgtgctggaggatgcccccccaggcactgtgatcgccgtcatcagtgttttg
gaccgggactctggggacaacggccgtgtgagctgtgaggttggccccaacgtgccattc
gagctccgctcctccttccgcaactactacacgctggtgaccacgcaagcgctggacagg
gaggttgtgcctgagtacaatgtgagcatcacggcccgagacatgggctcgcccgccctg
ctgacccgcagcaccctcaccatcccggtgtctgatgtgaatgacaacgcgccgcgcttc
ctccagccctcctacagcgtctacgtgatggagaacaacgcaccgggtgcctccatctgc
tctgtcagtgcgttagaccccgactgccaacaaaatgcctacctgtcctactccatcgct
gaggggcacatccacggcatgcccgtgggcacctacgtgtccatcaactcggacagtggg
cacatgtacgccctgcgctccctcgactacgagcagatccgcagcttccagatccaagtg
caagctcaggacgcggggtttccccctctcagtgccaacgtcaccgtccacatctttgtg
ctggaccagaacgacaacgctccggtcatcgtttcccccatgccgcgcaatggctccgtg
gccacggagctggtgccgcggtcagcccggcctggctacctggtgggcacggtgtcggcg
gtggatgcggatgctgggctgaactctcgcctctcctaccagctcctccaggctactgac
ttcaccctcttcagcgtggcgcccgacacgggtgagctgcgcaccctccgctcctttctg
gagcaggatgccagccggcagcagctggtggtgcaggtgcgggacggtgggcagccagcc
ctctctgccactgtgtccctcctgctttccgtggtggagaccatgccccagactctctcc
gacttcagcgagttcagcctccctccagaggtgtcctcatcttccccactcaccctctat
ctccttgtctccctgggctccatctccttcaccttcctcctggccatcctcattctcaca
gccattcgctgccgcggagagcggcgctcccgccagggggacagctgctcgccacctcgc
tgccactgctgtcccgggtccagaccctcctctgatggcctgaagacttccaacctgacg
gcacaggcccctgcagggagcgcggctgccacctgccttgatgtgcctgcgggcggcccc
ccaggctactgctacaaggtctgcctcggtcctgagtctgctcagagtgacttcatgttc
ctcaaaccctgcagccccccccggaacaacgagaaggatcccgggaagcggtcccggcca
gagcagcatctccaggtctccaaagaggccaagcagcccaacacggactggctgcctcca
ggcacacagagacctgccctgaaaagctcccagagcctggaagacgtgggggaaatccgt
agagccctccagaaggagcacgagaggctgtgcacactggtgacccctgtctctgagttt
cagaaggcttcagcgggccccaacagcatctggacaccccagtacagccccttgtaccca
gccctggattatcagcacaacgtttacatccctggcacccccactctgctttccagcaag
gatgggcccctcttcccaggccgggagaacaaaaacagcttctccacctttggcaagagg
aagaagatgacaacttattgtgacatgcatgacagtgtggttatcaacaacgacctgaaa
tag
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