Sylvia atricapilla (blackcap): 136367364
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Entry
136367364 CDS
T10263
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
136367364
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sati01007
]
136367364
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sati03016
]
136367364
Enzymes [BR:
sati01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
136367364
Amino acid related enzymes [BR:
sati01007
]
Aminoacyl-tRNA synthetase
Class II (A)
136367364
Transfer RNA biogenesis [BR:
sati03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
136367364
Prokaryotic type
136367364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2d
Topo-V_HhH_2_2nd
HHH_3
Motif
Other DBs
NCBI-GeneID:
136367364
NCBI-ProteinID:
XP_066185000
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All DBs
Position
14:2872637..2890330
Genome browser
AA seq
501 aa
AA seq
DB search
MAEEAAVRAQADTVRRLKQDKADPDEIAKEVAKLLDMKAQLGADEGKQKFVLKTPKGTRD
FGPKEMAIRERAFKAIISCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGEL
LSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDP
MIPDAECLKIVHEILSDLQLGDFVIKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKV
PWEEVRSEMVGEKGLSPEAADRIGEYVQLHGGLELIERLLQDPKLSQNKLAKEGLGDVKL
LFEYLTLFGITGKISFDLSLARGLDYYTGVIFEAVLLQQEKEHVEEPVSVGSVAGGGRYD
GLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASEEKIRTTETQVLVASAQKKLLEER
LKLISELWDAGIKAEMLYKKNPKLLNQLQYCEDTGIPLVAIVGEQELKDGVVKLRIVATR
EEVNVRRESLVEEIRIRTSQC
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcggcggtgcgggctcaggcggacaccgtgcggaggctcaaacaggac
aaggccgatcccgacgagattgcaaaggaagtggcaaagctgctggatatgaaggcacag
ctgggggcagatgaggggaaacaaaagtttgtgctcaagaccccgaagggcactcgggat
ttcgggcccaaggaaatggccatccgtgagagggccttcaaagccatcatctcctgcttc
aagcgccacggggccgaagtcatcgacacgccggtgttcgagctgaaggagacactgaca
gggaagtacggtgaagactcgaagctcatctatgatctaaaagatcagggaggagagctg
ctgtcgctgcgctacgacctgacagtgccctttgctcgctatctggccatgaacaagatc
accaacatcaagcgctaccacattgccaaggtgtacaggagggacaaccctgccatgacc
aggggccgctaccgcgagttctaccagtgtgactttgacattgccgggcagtttgacccg
atgattcccgatgccgagtgcctgaagatcgtgcatgagatcctgagtgacctgcagctt
ggggactttgtcatcaaggtcaatgaccggcgcatccttgatgggatgtttgcggtttgt
ggggtcccggacagcaaattccgaaccatctgctccagcgttgacaaactggataaggtg
ccatgggaggaagtgaggagtgagatggtgggagagaaggggctctctcccgaggctgcg
gatcgcatcggggagtatgtccagctccacggtgggctggagctgatcgagcgccttctc
caggacccaaagctgtcccagaacaagctggccaaggaggggctgggcgacgtgaagctg
ctgtttgagtacctgaccctgtttggcatcacggggaagatctccttcgacctgagcctg
gcgcggggcctggactattacacgggggtgatctttgaggctgtgctgctgcagcaggag
aaggagcacgtggaggagccggtcagcgttggcagcgtggccggaggcggccgctatgac
gggctggtggggatgtttgatcccaagggcaggaaggtgccctgcgtgggggtcagcatt
gggatcgagcgcatcttctccatcctggaacagaggctggaggcctctgaggaaaagatc
aggacaacggagacacaggtgctggtggcctctgcccaaaagaagctccttgaagagcga
ctgaagctcatctctgagctgtgggatgctggaatcaaggcagagatgctgtacaagaag
aaccccaagctgctgaatcagctgcagtactgcgaggacacaggcatccctcttgtcgcc
atcgtgggtgagcaggagctcaaagatggagtcgtcaagctgcggattgtggcaaccagg
gaggaggtcaatgttcgcagggagagcctggtggaggagatcaggatacgaacgagtcag
tgttaa
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