Sylvia atricapilla (blackcap): 136367568
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Entry
136367568 CDS
T10263
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136367568 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sati03400
]
136367568 (UIMC1)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
136367568 (UIMC1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
DUF2225
Motif
Other DBs
NCBI-GeneID:
136367568
NCBI-ProteinID:
XP_066185398
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Position
14:complement(15213402..15253291)
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AA seq
821 aa
AA seq
DB search
MPRRKKPAEGLESRGQDGEEEEEEKRNPTNAKKRSFVDAFIVISDSDGEESKEESGLQKK
RTKQLDRTKFAAKRKIAQMTEEEQFALALKMSEQEARQVNSQEEEEEELLRKAIAESLSS
CQPSDSSTATPQLSVEALDSQGQGQPAEKEGPEILGGLAFCPDTPPSDCSSHSQSSRADG
NGQMDVAQSPLVVLRRLSQEIVESSLVSSIIVSPGKGQPVTRSSEKSSSPAKSDSSKMLP
STLGEDFMSLSPTFGKVASGGSWRLTPRRLFTRPSSSSEEAGHEPKEQLLPCTGHSVGEA
GTGSSATLGKSRTTEQCDSPRKSGGGAGSKHSSQPGHTAKVCGSTEQAEQNEGSGSTPDL
CTLTAVEEKHKQEEARDTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQLL
HKKEFGNPVVPSSSLSQNELGKGEEISRENGVADGTEDGDTEGQESENITWLHSSKRREA
ESPGHSMEEEKNSTSDDEPTTSYCQPAQVLPAEDVPEDGEPMQIAQSISTMTPLGSKRSP
DTATENSAEEEISVCPETQPSPLEAVEEEREELCSDIRGAPLQVGGDEDAGRTVSECSPT
AAARVSCPLCDHGFPADEIEVHAMYCNGIAGPEPAEDAPVLTRRQREARNKAASAESSPP
SFDIDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRRGKDTRRQERGLLRMLE
LSESMSEGGKLSILAWLGADAGTPITGLGDQQSSPTLSAADGEPSADSPISLQHLPFHVS
PEKPGISSEAVDGVVDSEPRMALHAGSQQRTKGCRRRRHKF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaagaagcctgcagagggcctggagtctcgaggtcaggatggggaggaa
gaggaggaagagaagaggaacccaaccaatgccaagaagcgcagttttgtggacgcattt
attgttatatccgacagcgatggagaggagtcaaaggaagagagtggattgcaaaagaag
agaacaaaacagctggatcgaacgaagtttgctgctaaaagaaaaattgcacagatgacg
gaagaggaacaatttgcactggccctgaaaatgagtgagcaagaagctagacaagtgaac
tctcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagccttagtagc
tgtcagccctcagactcgtcgactgcaactcctcagctgtcagtggaagcactagattca
cagggccaaggccagcctgctgagaaagaaggccctgagatcctgggaggcctggcgttc
tgccctgacacccctccctctgactgcagctcccactcacagagctccagagctgatggg
aatggacagatggatgtcgcccagagccccttggtagtgttgaggaggttaagccaggaa
atcgttgaaagctcactagtatccagcataatcgtgtctccagggaagggccagcctgtg
acaaggtcaagtgaaaagtcttcctcaccagcaaaaagtgattcgagtaaaatgttaccc
agcactcttggagaggacttcatgtctttgagtcccacctttggcaaggtggcttcagga
ggctcctggcgactcacacctcggagactgttcacccgcccctccagctcttctgaagaa
gcaggccatgaaccaaaagagcagctcctgccctgcactggccattctgtgggagaagct
ggtactgggagctcagccacactcgggaagagcaggaccacagaacagtgtgacagcccc
aggaagagtggtggaggagcaggtagcaaacacagctcacagcctgggcacactgccaag
gtctgtggttccacagagcaagcagagcagaatgaggggtctggcagtacccctgatctt
tgcacgctgactgcagtggaggagaagcacaaacaggaggaggcaagagacacagtgcac
tattattggggtatccccttctgccccaaaggggtggaccccaaccagtacaccaaagtc
atcttgtgtcagctggaggtttaccagaagagcctgaagcaggctcagaggcagctattg
cataagaaggagtttggtaaccctgttgtgcccagttcttccttgagccaaaacgagctt
gggaagggagaggagataagcagggagaatggggttgctgatggtacagaagatggagac
acagaaggacaagagtctgaaaacatcacctggctccactcttcaaagaggagggaggca
gagagtccagggcacagcatggaagaagagaagaactccacttctgatgatgaaccgact
accagctactgccagcctgcccaggtactgcctgcagaggacgtgcctgaagatggggaa
cccatgcaaattgcacagagcatctccacaatgaccccacttggcagtaaaaggagccca
gatactgccacagaaaactctgctgaagaagagatctctgtttgcccagagacacagcca
agcccactggaagctgttgaggaggagagagaagagctctgttcagacatcagaggtgca
cctttgcaggttggtggggatgaagatgctggcaggactgtgtctgagtgcagtcctaca
gctgctgcccgtgtgtcgtgccctctgtgtgaccacggcttcccagctgacgagatcgag
gtgcacgccatgtactgcaacggcatcgcgggaccggagcctgccgaggacgctccagtg
ctcaccaggcgtcagagagaggcaagaaataaagctgccagtgctgaaagcagcccacca
tccttcgacattgacaagtgtgagaagtgctacctctgtaagtcactggtgccactgctg
cagtatcagaggcacgtggacagctgccttcaggctgctaggcaagctcagggaaccagg
aggctgcgaagaggcaaggacaccagaaggcaggagagaggactcctcaggatgctggag
ctctcggagagcatgtctgaaggtggaaaactttctattctggcctggctgggtgctgac
gcggggactcccatcactggattaggagaccaacagtcctctcctacactctcagctgct
gatggggagccgtcagcagacagccccatctcccttcagcaccttcctttccatgtctct
cctgagaaacccggcatctcctcagaagccgtggacggtgtggtggactcagagccacgc
atggctctccatgcgggcagccagcaacggaccaaaggctgccgccggagaaggcacaag
ttctga
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