Sylvia atricapilla (blackcap): 136367609
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Entry
136367609 CDS
T10263
Symbol
TGIF1
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136367609 (TGIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136367609 (TGIF1)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
136367609 (TGIF1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Carla_C4
Homez
Motif
Other DBs
NCBI-GeneID:
136367609
NCBI-ProteinID:
XP_066185482
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All DBs
Position
1:complement(103610908..103622502)
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AA seq
442 aa
AA seq
DB search
MSERVQADTPPFRPVPPLPSDRASTPGRGREERGGGGSRRRECQCSARLLSRTHCGEVGE
GGRCVPFSPVPFLTLTGRGQSPAEGNKGKGGGKPTPAAPESPRGRQSPAAPADSSAAADR
APGSAAVFLLSSSTFSSSSSSPSLKGGSSVRRRERNLGRCVRCPAIGSVLAIKMKSKKGV
VAISGSETEDDDTMDVPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE
KALLSRQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGTKLPEGGLVESAI
STKNYIPLLEETAFLPAAAPLGKTVSSSKPASPGSVLARPSVICHTTVTALKDAPFHFCQ
PADVGQTTDLQQPPAGGFTENPLSCHEDASKLGPGANTQSGLFNTPPPTPPDLNQDFSGF
QLLVDVALKRAAEMELQAKLMA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgggtacaggcggacacccccccgttccggccggtccctcccctcccgtct
gacagagcctcaacacccgggagggggagggaggagagaggaggaggaggcagccgccgc
cgcgagtgccagtgcagcgcacggttactctcccgtactcactgcggggaggtgggggag
ggcgggcgctgtgtacctttctctcccgtgcctttcctcactttaacaggccggggccaa
tcgccagcagaagggaacaaagggaaggggggagggaagcccaccccggccgcaccagaa
agcccccgggggaggcagagccctgcggctcccgctgacagcagcgcggccgcggaccgg
gcgcctggctccgcggcggtgtttcttctttcttcatcgaccttctcctcctcctcctcc
tcgccgagcttaaaggggggaagcagcgtccggcgaagggagagaaacttgggtcggtgc
gtgaggtgtccggcgatcggctcggtcctcgcgatcaagatgaaaagtaaaaaaggtgta
gttgcaatatcaggcagtgaaacggaggatgatgacactatggatgtcccactggatctt
tcctcatcggctggctcaggcaaacggcggcgacgtggcaacctgcccaaggaatctgtg
cagattcttcgggactggctctatgagcaccgatacaatgcttatccttcagagcaagaa
aaagcactgttatcccgacaaacacacctttccacactacaggtctgcaactggtttatc
aatgcacgccgcaggctgttacctgacatgctgaggaaggatggcaaagacccaaatcag
ttcactatctcgcggcgagggaccaagcttcccgagggcggcctggtggagtctgccatc
agcacaaagaactacattcccctgctggaggagactgccttccttcccgctgccgcaccg
ctcggcaagactgtgtcctcttccaagccagcttccccgggctcggtcctggctcggccg
tccgtgatttgccacacgactgtgactgcgttgaaagatgcccccttccacttttgccag
ccggctgatgtaggccagaccacggacctgcagcagcccccggccggcggcttcacagag
aaccccctctcctgccatgaggacgcatccaaactgggacctggtgcaaacacacagagt
gggctctttaacactcctcctccaacaccaccagaccttaaccaggactttagtggattt
cagcttctggtggatgtggcactcaaaagggcagcagagatggagttgcaggcgaaactt
atggcctaa
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