Sylvia atricapilla (blackcap): 136367688
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Entry
136367688 CDS
T10263
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C3-like
KO
K16499
protocadherin delta 2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136367688
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Protocadherins
136367688
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
136367688
NCBI-ProteinID:
XP_066185587
LinkDB
All DBs
Position
14:complement(2700815..2707364)
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AA seq
1231 aa
AA seq
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MTRFPSKEAATRSLLPDRRPHERGTSRVGLAALAGTRSFSQPDKPLQLRRLLPPPVSRSA
LDPASPRPVGSKAGERLGPAVPFPTGTAAGRGQRPPRPVTERLRGRRRWEAIHGAARARR
RLETGLRGERIGQRRDRERYRGGEGGRRGRRLSRFGGQRGTSGSLCSRLPLAFRGGPKCK
RQAKERGGGGGAAATPRLGAAAGPWGPGKAPAGAALPPLPPLPPLGRAPGRHPARGQLRY
AVPEELEHGAFVANLGEDLGLDVSTLSARRFRIVSRAGARQHLEVNLENGILFVNERIDR
EEVCEAGGTCLLHLQLLVESPLELYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARF
PLESAQDPDVGTNSVHTYRLSPNGFFSLEVQTRSDASKFAELVLERALDREQQRVHRVLL
TALDGGXPERSGTAHILVTVLDANDNVPAFDQPSYGXSLPEDAPAGTLVIQLNATDLDEG
PNGEIEYSFSGHAPPRVRELFHIEPRSGQVLLKGRLDYERASLHELYVQAKDRGPSAVAV
HCRVLVHLLDVNDNAPEVTLTSVSXPCAGGCPPGTVIAVISVLDRDSGDNGRVSCEVGPN
VPFELRSSFRNYYTLVTTQALDREVVPEYNVSITARDMGSPALLTRSTLTIPVSDVNDNA
PRFLQPSYSVYVMENNAPGASICSVSALDPDCQQHAYFPTSSLEGHIHGMPXGHLVVLNS
DSGHMYALRSLDYEQIRSFQIQVQAQDAGFPPLSANVTRPHLCAGTRTINAPVIVSPMLR
NGSGATELVRRSAXPGYLVGHGCRRCDADAGLNSRLSYQLLQATDFTLFSVAPDTWXAAP
LRSFWRQDASRQQLVVQVRDGWQPALSATVSLLLSVVETIPRLSSDFSEFSLPPEVSSSS
PTPFYLLVSLGSISFTFLLAILILTAYSLPRRSGAPAQGDSCSPPRCQLRSRVQTPPLIG
LKTSNLTAQAPARERGSATCLDVPAGGPPGYCYKVCLGSESAQSDFMFLKPCSPPRNNEK
DPGKLVPAKIASISRSPREGPNNQPCSSRFFQAKQPNTDWLPPGTQRPALKSSQSLEDVG
EIRRALQKEHESCAPLVTPVSEASAGPNSIWTPQYSPLYPALDYQHNVYIPGTPTLLSSK
DGPLFPGRETKSFSTFGKRKKMTTYCDMHDSVVINNDLKLAWMALSLESSALFQLPGPTT
AHASMQWTTRDYGAAGRMAQQIMCEGFKDKR
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgacacggttcccctccaaggaagcagcgacgagatccctcctccccgaccgccgaccc
cacgagcgcggcacgtcccgcgtgggtctcgctgcactcgcagggaccagatccttttcc
cagcccgacaaacccctccagctccgccgcctcctgcctcctccggtctcccggtcggcc
ctggatcctgcttcccctcgtcccgtggggagcaaggcgggggagcggctggggccggcc
gttcccttccctacggggaccgccgcggggcgggggcagcggccgccccgtcccgttacc
gagcgcctccggggacggcgacggtgggaggcgattcacggagctgcccgggcgcggcgg
cggctggagacgggtctgcggggagaacggatcggccagcgcagggaccgtgagcggtac
cggggcggggagggggggcgcaggggccgccgtctgtcgcgcttcgggggccagcggggg
accagcggctcgctctgctcccgcctccccctcgccttccgcggggggccgaaatgcaag
aggcaagcgaaggagaggggaggaggcggaggtgcggctgcgactcctcgtctcggggct
gccgcggggccatgggggccggggaaggctccggccggggcagctcttcctccgctccct
cctcttcctcctcttggccgggcccccgggcgccacccggcgagggggcagctgcgctac
gccgtgccggaggagctggaacacggagccttcgtggccaacctgggtgaggacctgggg
ctggatgtgtccactctgtcagcgcggaggttccgcatcgtgtcgcgggccggggccagg
cagcacctggaggtgaacctggagaacgggatcctctttgtgaacgagcggattgaccgg
gaggaggtgtgcgaggccgggggcacctgcctgctccacctgcagctcctcgtcgagagc
ccgctggagctctaccgcgtcgaggtggaggtgctggacatcaacgaccacgcacccacc
ttcccttggcaggaatatgtgctggaggtggccgagtccgccgtgctcggcgcccgcttc
cccctggagagcgcccaggatcccgacgtgggtaccaactctgtgcacacctaccgcctc
agccccaacggcttcttttccctggaggtgcagacacggagtgatgccagcaagtttgca
gagctggtgctggagcgtgccctggaccgcgagcagcagcgtgtgcaccgggtgctgctc
acggctctcgacggcggcntccccgagcgctcaggcacggcacacatcctcgtcacggtg
ctggacgccaacgacaacgtgcctgcctttgaccagccctcctacggtnngagccttcct
gaggatgctcctgctggcactctggtcatccagctcaatgccactgacctggatgagggc
cccaacggggagatcgagtactccttcagtgggcacgcaccaccgcgtgtccgggagctc
ttccacatagagccccggagtgggcaggtgctgctcaagggccgcctggactacgagcgg
gccagcctccacgagctctacgtgcaagccaaggaccgcggaccctcagctgtggctgtg
cactgcagggtgcttgtgcacctccttgacgtcaatgacaacgcgccagaggtgaccctc
acctctgtgtccnnaccctgtgctggaggatgccccccaggcactgtgatcgccgtcatc
agtgttttggaccgggactctggggacaacggccgtgtgagctgtgaggttggccccaac
gtgccattcgagctccgctcctccttccgcaactactacacgctggtgaccacgcaagcg
ctggacagggaggttgtgcctgagtacaatgtgagcatcacggcccgagacatgggctcg
cccgccctgctgacccgcagcaccctcaccatcccggtgtctgatgtgaatgacaacgcg
ccgcgcttcctccagccctcctacagcgtctacgtgatggagaacaacgcaccgggtgcc
tccatctgctctgtcagtgcgttagaccccgactgccaacaacatgcctactttcctacc
tcctcgctagaggggcacatccacggcatgcccnntgggcacctcgttgtcctcaactcg
gacagcgggcacatgtacgccctgcgctccctcgactacgagcagatccgcagcttccag
atccaagtgcaagctcaggacgcgggttttccccctctcagtgccaacgtcacccgtcca
catctttgtgctgggaccagaacgatcaacgctccggtcatcgtttcccccatgctgcgc
aatggctccggggccacggagctggtgcgccggtcagccncgcctggctacctggtgggg
cacgggtgtcggcggtgtgatgcggatgctgggctgaactctcgcctctcctaccagctc
ctccaggctactgacttcaccctcttcagcgtggcgcccgacacctggtgagctgcgccc
ctccgctccttctggaggcaggatgccagccggcagcagctggtggtgcaggtgcgggac
gggtggcagccagccctctctgccaccgtgtccctcctgctttccgtggtggagaccatt
cccagactctcgtccgacttcagcgagttcagcctccctccagaggtgtcctcatcttcc
ccaactcccttctatctccttgtctccctgggctccatctccttcaccttcctcctggcc
atcctcattctcacagcctattcgctgccgcggagaagcggcgctcccgcccagggggac
agctgctcgccacctcgctgccaactgcggtcccgggtccagacccctcctctgattggc
ctgaagacttccaacctgacggcacaggcccctgccagggagcgcggctctgccacctgc
cttgatgtgcctgcgggcggccccccaggctactgctacaaggtctgcctcgggtctgag
tctgctcagagtgacttcatgttcctcaaaccctgcagtcccccccggaacaacgagaag
gatcccgggaagctggtcccggccaagatagcaagcatctccaggtctccaagagagggt
cccaataaccaaccttgctcttcccggtttttccaggccaagcagcccaacacggactgg
ctgcctccaggcacacagagacctgccctgaaaagctcccagagcctggaagacgtgggg
gaaatccgtagagccctccagaaggagcacgagagctgtgcaccactggtgacccctgtc
tctgaagcttcagcgggccccaacagcatctggacaccccagtacagccccttgtaccca
gccctggattatcagcacaacgtttacatccctggcacccccactctgctttccagcaag
gatgggccactcttcccaggccgggagacaaaaagcttctccacctttggcaagaggaag
aagatgacaacttattgtgacatgcatgacagtgtggtaatcaacaacgacctgaaacta
gcctggatggctctgtccttggaatcttctgcattatttcagctgccaggtccaaccaca
gcacacgcctccatgcaatggaccactcgagactatggggctgctgggagaatggctcaa
cagatcatgtgtgaaggatttaaggacaagagatga
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