Sylvia atricapilla (blackcap): 136367735
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Entry
136367735 CDS
T10263
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136367735
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Protocadherins
136367735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
136367735
NCBI-ProteinID:
XP_066185629
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All DBs
Position
14:complement(2396891..2399337)
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AA seq
815 aa
AA seq
DB search
MKLRKSEEPLPGRAVALILVLCVSGRRAETARYSVPEERERGSFVANIAKDLGLAGEELL
ARNARLVPEGEKQYLELNQRTGDLVVREQMDREELCGQSEPCLTRFEVLLESPLQSFRAE
VRLTDINDNSPVFLNKEIVLKIPESAMPGTQFLLESAHDPDVGNNSLQHYSISSNEHFHV
YTRRRNDGGRYAELVLDRALDREQQPEVAFSITAMDGGTPPRSGTALIRVVVLDINDNIP
VFTQTLYXVSVMENSSQDTLVVIVSASDLDEGTNGEIVYSIFQNSEENLQTFKINPETGQ
IRLKKPLDYEEKKTYEIDVQAIDGGGLSTHCKVVVQVKDVNDNAPEVIITSLTTPSPKPP
RNTVVALFNVRDRDSGDNGRTTCELTGEQPFRITLLAADAYALATSETLDREQVEEYNVT
VRAHDKGSPSLSTWKTLLVRLLDVNDNAPTFTQAIYTMVMSENEPAGRSLGRLSATDPDA
GENARVRYALLPPPTGSLAVASFVSVDAESGTVRSLRPLDYEKVRAFEVTVGAADGGSPP
LSAQAVLRVVVRDDNDNAPVLLHPAPDSSAXPELVPRWAPSGYLVAKVVAVDADAGQNAW
LSYELAKATEPGLFRVGLHSGEVRTARAVTERDAARQRXIVLVRDRGQPSRSATATLAVA
LVDDFSDAFYQLGHDPASRQQPQAEEELLTTYLIASLCGVSSXFLLSILVLAASTLCKAR
VGRTSSSLAQLLRDGDFTSDGVGVGSTGILSPAYGYEKYLTSGSGRSEFHFLRPILPALT
AMLKRGWKTDGEPLNRLLPERDREDLAESTATPPF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaggaagagcgaggaaccgctccccgggagagcggtggctttgatccttgtc
ctctgtgtctcggggaggagagcagaaactgctcggtactctgtgcccgaagagagggag
agaggctcctttgtggcgaatatcgctaaggacttggggctagctggagaggaattattg
gctcgtaatgctcgactcgttcctgaaggagaaaagcagtatttagaactgaaccagcgc
accggggatttggtggtgagagagcaaatggaccgggaagagctgtgtggacagagcgag
ccctgtttgacgcgttttgaggtgctgctggagagcccactgcagtccttccgagctgag
gtaagactcacggatataaatgataattctcctgtgttcttaaacaaagagatagtgtta
aagatcccggaatctgcaatgccggggactcagtttttgttggaaagcgctcatgatcca
gacgtagggaacaatagtcttcagcattacagtatcagctcaaacgaacattttcatgtg
tacacccggcggcgaaatgacggcgggaggtacgccgagctggtgctggatcgagccctg
gaccgggagcagcagccagaagttgctttcagcatcactgctatggatggtgggactcca
ccgcggtctggcacagctttaatccgtgtggtagttctggacataaacgacaacatccca
gtatttacccagactctgtatnaagtctctgtaatggaaaatagctcccaggatacctta
gtagtgatagtgtctgctagtgatttagacgaaggaacaaatggggaaatagtgtattcc
atatttcaaaattcagaggaaaatctccaaacgtttaaaataaacccagagacaggccag
attcgactcaaaaaacctttggattatgaagaaaaaaagacctatgagatagacgtccaa
gccatagatggagggggcctgtccacgcattgcaaggtggtggtgcaggtgaaggacgtg
aacgataatgctcccgaggtgatcattacctcactcaccacaccctctccgaagccgccc
cgcaacacagtagttgccctcttcaacgtgcgggaccgggactcgggggacaatggcaga
acgacctgcgagctaacaggagagcaacccttcaggatcacgctgctggcagccgatgcg
tacgcgctggcgacatcagagacactggaccgggagcaggtggaggaatacaacgtgacg
gtgcgagctcacgacaagggctccccctccctctcgacatggaagactctgctcgtgcgg
ctcttggatgtgaatgacaatgcacccaccttcacccaggcaatttacaccatggtgatg
agcgaaaacgagcccgcggggaggagcctgggccgcctcagcgccacggaccctgacgcg
ggagaaaatgctcgcgtgagatatgctctattgccaccaccaacaggcagcctcgccgtg
gcatcatttgtgtcagtggatgcggagagtggaaccgtccgtagtttgcgcccgctggac
tatgagaaggtgcgcgccttcgaggtgacagtgggcgcagccgacggcggctccccgccg
ctcagcgcccaggccgtgctgcgcgtggtggtgcgggacgataacgataacgcgcccgtg
ctgctgcacccggcccccgacagcagcgcgnngccggagctggtgccgcgctgggcgccc
tccggctacctggtggccaaggtggtggcggtggacgcggacgcggggcagaacgcgtgg
ctgtcctacgagctggccaaggccacggagccggggctgttccgcgtggggctgcacagc
ggcgaggtgcgcacggcgcgggccgtgacagagcgggacgcggcccggcagaggnccatc
gtgctggtgcgggaccgcgggcagccgtcacgctctgccactgccaccctcgccgtggca
ctggtggatgatttctccgatgccttctaccagcttggccatgatcctgccagtagacag
cagccgcaggccgaggaggaattgctcaccacttacctcatcgcctccctgtgtggcgtc
tcgtccnctttcctcttgtccatcctcgtcttggctgcaagcacgctctgcaaagctcgt
gtcggcagaacttcctcctccctcgcccagctgctacgcgacggtgacttcaccagtgac
ggcgtgggcgtgggcagcacgggcattctgtcgccagcttacggctatgaaaagtatctg
accagcggctcggggaggagcgaattccacttcctgaggcccatcctgccagccctcaca
gcaatgctgaagcggggctggaaaacggacggggagcctctaaaccgcttgctgcctgag
cgcgacagggaagaccttgcggagagcacagccacccctcccttttag
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