Sylvia atricapilla (blackcap): 136367957
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Entry
136367957 CDS
T10263
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136367957 (RAI1)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
136367957 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
136367957
NCBI-ProteinID:
XP_066185927
LinkDB
All DBs
Position
15:5715847..5790454
Genome browser
AA seq
1924 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTVALAGGRPYHEPAATSLPFRTHFQQQPQQQQQQQQQQQQQQQPPALP
YPKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQ
PPLERPLGSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPQPPQPPQPPQPP
QPMQGRHHASETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARS
VGRSPSYSSTPSPLMPNLENFQYSQQPLNAGAFPAGIADHSHFMPLLNPSPTDGTSPDTQ
SGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKTAVPQKKGIKTPAR
TPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLYC
NQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVSNERD
CPRLLLSALSQEELASEIIVLQDAISEKADKAWANLPMLGKETTKSPFQLENHRPSLDSM
VKGAWPSQGDSSTLTEPLKLDKASGASTGKDFNEEVYEGPQVEFTATESKDVLKDTAPLA
FNSKPSIPAATSSAGATGYSCYSNTTANSVASENAMEHFEWPEESLGEACLRWKDLQATD
LPKGLFPSKLVSSCKEKKNACGLDLCDGEQPAKNEPVQDFGQQVMQEEEETLTYDEATKA
DSERWLQDTRHCCSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASPS
KPPEMPAVLSSSEVPVSAEETVSTVEKESSGPTPRLSGQSVILLGPAVGTETKVKSWFKS
SLPHIQPEEENGGGETSHLEAANAESTSSVTVKQQLTPENVLGKMEPVSRGKSLRNKRVH
CRLPEGDGPSSTMLSSFDELPAASSGAGACLGPDGQTEIPSKSTQSQTPRFPAEGLPARM
CTRSFTALAEPRAPAPLEGLKAPAHQEKLGKKPGCGVKQRVAFKTRKRNSRPAPRVVQNA
SDGTLLVPSLVAAEEVAEPTPLEGDAVETGERDQRSMILRSRTKTQEVFYTKRQRGKRAA
DVRLKNCKAPKKLISNNHLPPAFKLPAPGSPHKEGKVGGRMKLPKAGPGMGGKMSERPLH
SLKRKSTFISPIPTKKRNLVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKAKLPPKSSGE
AILKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFTC
KPAATAVAATVAAYGSSLSPAGAERERAVKHSGLAVAMGDARLPKLAAAQKVPAMPVAEP
LCRNPNGRAPKGKLGGAKKLPHDSCQGEACGPTPGTQSSPNMVAKNLGLLPKKRNRKGKA
AALGMTKAPLSPALPPPLPRERVGGPSGAEEAPREKKPKTEEKEAGSSDGPPEGRSAAGS
ARGPKPRANHSNYNGYSKRQRKRLGHGKAKAVPARCKSRGKRRRQPQQAPLLHPAEPEIR
LKYISCKRLRADSRAPPFAPYVRVERRGEFTTTCTVVNSPGDEARLQRGPAGPAPRPRAA
LPASSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKA
RAEGPGEDSAVPAAAERAPRGTEGGCGGGGKAARPEGAAEAAKQSSLRSSPRGMFRRLQS
CYCCDERTEGEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLY
GLQEAVKAAADLKCSSCQQVGATVGCCQKGCPHTYHYACAIDTGCLLTEESFSLRCPKHK
RQPV
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccttacgcgggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcagggcagaccggccttttccaattacaccgtgcaggagaacagcccttatccagcc
cggtattccggggacgagagcctgcaggcgtggggtggccagccacaggcactgcccggt
ggcgtggccaagtatgaagacaacctgatgaagaagacagtggcattggcgggcgggcgg
ccataccatgagccggcggccacctcgctgcccttccggactcacttccagcagcagccg
cagcagcagcagcagcagcagcaacagcagcaacagcagcagcagccgcccgcactcccc
taccccaagctgcagcggcagaaactgcccaacgatgtctcctcacccatgcccttctca
cagagccctcacttcgggcagcactcccagtccttccctgcctcctccacctactcctca
gtgcccgggggcagccagcctgcacactcctacaagagctgcacggcgccctcggggcag
ccgccgctggagcggcccctgggcagcgctgccagcctggcccctggcccccgcgtgccc
aacctgcacggctaccagcccaaccgcattggctacgagcagcccccgcagccaccgcca
cagcccccgcagccgccaccaccacagcccccacagccaccgcagcccccgcagccccca
cagcccatgcaagggcggcatcacgcctcagagaccctccactaccaaaacctggccaag
tatcaacattacaaccagccaggccagacctactgccagggcgatgcgccgcccgtccgg
acgccggagcaatactaccagaccttcagccccagcgccagccactcaccggctcgctcc
gtcggcaggtccccgtcctacagctccactccctcccctctgatgcccaacctggagaac
ttccaatacagccagcagcctctgaatgctggtgctttcccggctggcattgctgaccac
agccatttcatgccgctgctgaacccttctcccactgatgggacgagccccgacactcaa
tctgggaactgcaaaaacttgcagaaggagaagctgcctgaaaacctgctgtcagacctg
agcctgcagagcctgacggcactcacctcccaggtggagaacatctccaacactgtccag
cagctgctgctctccaaaacggctgtgccccagaaaaaaggcatcaagaccccagcgagg
acccccgagcagctcaaggggcagcactgcagtcctgagagcagcacctactcggcagag
caggtggggacccccctgtccgacccgctgagcaccccccagtctgtccatgctgagaca
caggacactgactatctcagtgggtcagaggaccagctggagaggagtttcctgtactgc
aaccagaaccgcagccctgcccgcgtcaacagcaactccaaggcaaagcctgagtcagtg
tccacctgctctgtgacctccccagacgatatgtccaccaaatcagatgactccttccag
agtatccacgccaccctgcccctggagaccttcaccaagtatgtgagcaatgaacgggac
tgcccccgactgctcctcagcgccctgtcccaggaggagctggcttctgagatcattgtc
ctgcaggatgccatcagtgagaaggcagacaaagcctgggccaacttgcccatgctgggc
aaggagaccaccaagtcccccttccagctggagaaccaccggcccagcctggactccatg
gtgaagggtgcctggcccagccagggtgactccagcacgctcactgagcctctcaagctg
gacaaagcttcaggggccagcacggggaaggactttaatgaggaggtatatgagggtccc
caggtggagttcacagccaccgaaagcaaggatgtgctgaaggacactgccccactagcc
ttcaactccaagcccagcatcccagcagcaacgtcaagcgcgggagccaccggctacagc
tgctattcaaacaccaccgccaactcggtggcgtctgagaatgccatggagcattttgag
tggccggaggagagcttgggtgaggcctgcctgaggtggaaggatctccaagccaccgac
ctccccaagggcttgttccccagcaaattggtgagctcctgcaaggagaaaaaaaacgcc
tgcggcttggacctgtgcgatggagagcagccagccaagaatgagccggtccaggacttt
ggtcagcaggtgatgcaggaggaggaggagacactgacctacgatgaagcaacaaaggca
gatagcgagaggtggctgcaggatacccggcactgctgctcagctggggactttagtgag
atccccatcatctcctcgccagatctgaaggagtcagacctggaggcagaagagtactcc
tcactctgtgaactggctggctcagagcagaagtcagtgacatatgatgcctcaccatcc
aagcccccagagatgccagccgtgctgtcctccagcgaggtgcctgtgtctgccgaggag
actgtcagcacagtggagaaggagagctcaggtcccaccccacgcctctctggccagtct
gtcatcctgctgggccctgctgtgggcacagagaccaaggtgaagagctggttcaaatcc
tccctgccccacatccagcctgaggaggagaatggcggaggggagacgtcccacctggag
gcagccaatgctgaatccacctcatcggtcacggtgaagcagcaactcacacccgaaaat
gtgctggggaagatggagcctgtctcacggggcaagagcctccgcaacaagagggtccac
tgccggctgccagagggggatggccccagcagcaccatgctgagttcattcgatgagctg
ccagctgccagcagtggggccggtgcctgcctggggccagatggacagacagagatacca
agcaagagcacccagagccaaacaccccggtttccagccgagggtctgccagcacgcatg
tgcacccgctccttcaccgccctggccgagccccgcgcccctgccccgctggagggactg
aaggcccctgcgcaccaggagaagctggggaagaagcccggctgtggcgtgaagcagcgg
gtggctttcaaaaccaggaagcgcaacagccggccggccccaagggtggtccaaaatgcc
agtgatggcaccctcctggtgcccagcttggtggcagcggaggaggtggcagagccgaca
ccactggagggagacgcagtggaaaccggggagagggaccagcggtcgatgatcctccgc
tcccggacaaagacacaggaggttttctacaccaagagacagaggggcaagcgggcagct
gatgtccggctgaagaattgcaaggcacccaaaaagctcatatccaacaaccacctccca
cctgccttcaagctgccagctccaggcagcccccacaaggagggcaaggtgggtggccgg
atgaagctgcccaaagcagggccaggcatggggggcaagatgtcggagcggccgctgcac
tcactgaagaggaagtccaccttcatctcccccatccccaccaagaagaggaacctggtc
ctgcggagcaacagtggtggcgtgaaggaggagaagccagagggtccccccagcctcttc
aagaagatgccggtggccaagaaggtgaaagccaagctgccccccaagagctctggcgaa
gccatcctgaagccgcccctgccaaaagaggcccctgatgtctgcatcaagatcacctcc
cgggcggccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgtggc
ctcaagctggaggccatcgtccagaagatcacctcacccaacctgaagaagtttacctgc
aaaccagcagccacggccgtggcagccacggtagctgcctatggctcctccctgagcccg
gcgggggcagagcgggagcgggcggtgaagcacagtgggctggccgtggccatgggcgat
gcgcggctgcccaagctggcggcagcacagaaggtgcccgcaatgccggtggctgagccg
ctctgccggaaccccaacggccgagcgccaaaggggaagctgggcggcgccaagaagctg
ccccatgacagctgccagggggaggcttgtgggccgacgccggggactcagtccagcccc
aacatggtggccaagaacctggggctcctgcccaagaagaggaaccgtaagggcaaagca
gcagcgctgggcatgaccaaggcgcccctcagccctgcgctgccaccaccgctgccccgg
gagcgtgtaggcggcccgagtggtgcggaggaggcgcctcgggagaagaaaccaaagact
gaggagaaggaggcggggagcagtgatggcccccctgagggacgctccgccgccggctcg
gcgcggggaccgaagccgcgggccaaccactccaactacaacggctactccaagcggcag
cggaagcgcctgggccacggcaaggccaaggcggtgccggcgcgctgcaagagccgcggg
aagcggcggcggcagccccaacaggccccgctgctgcaccccgccgagcccgagatccgc
ctgaagtacatctcctgcaagcggctgcgggcggacagccgcgccccgcccttcgctccc
tacgtccgagtggagaggcgcggagagttcaccaccacctgcaccgtcgtcaactcgccc
ggcgacgaggcgcggctgcagcggggaccggccgggccggcgccgcggccgcgggcggcc
ctgcccgcctcctccaccatgcacatggggccggtggtgtcgaaggcgctgagcgccgcg
tgcctggtctgctgcctctgccgcaaccccgccaactacaaggacctgggggatctctgc
gggccctactaccccgaggactgcctgcccaagaagaaatcccggctgaaggagaaggcg
cgggcggaggggccgggcgaggactccgccgtgcccgccgcggccgagcgggcgccccgc
gggactgagggcggctgcggcggcggcgggaaggcggcgcggcctgagggggccgccgag
gcggccaagcagagctcgctgcgctccagcccgcggggaatgttccgtcggctgcagagc
tgctactgctgtgacgagaggacagagggcgaggaggcggccgaaaagccccggcggcac
gaatgtcacaaggccgagtccccgccgcaggagccggcgggcgacacgcaggagcactgg
ctgcacgaggcctgtgccgtatggaccgctggggttttcctggtggcggggaagctctat
gggctgcaggaggctgtcaaggcggctgccgacctgaagtgctcgagctgccagcaagtg
ggagccactgtgggctgctgccagaaggggtgtccccacacctaccactacgcgtgtgcc
atcgacacaggttgcttattaactgaagagagcttctctctgagatgtcccaaacataag
aggcagccggtgtag
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