Sylvia atricapilla (blackcap): 136367969
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Entry
136367969 CDS
T10263
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03440
Homologous recombination
sati03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136367969 (TOP3A)
03460 Fanconi anemia pathway
136367969 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sati03032
]
136367969 (TOP3A)
03400 DNA repair and recombination proteins [BR:
sati03400
]
136367969 (TOP3A)
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
136367969 (TOP3A)
DNA replication proteins [BR:
sati03032
]
Eukaryotic type
DNA Topoisomerases
136367969 (TOP3A)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
136367969 (TOP3A)
FA (Fanconi anemia) pathway
136367969 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
zf-CCHC_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
136367969
NCBI-ProteinID:
XP_066185950
LinkDB
All DBs
Position
15:complement(5980520..5991802)
Genome browser
AA seq
1014 aa
AA seq
DB search
MNLYVRLFTRGRMLPQPWRFFSRAAEDLALQRIRKVLCVAEKNDAARGIAELLSNSRMRR
REGFSKFNKIYEYDYQIFGQNVTMVMTSVSGHLLAHDFIMPFRKWHSCNPLALFDAEIEK
YCPENYLDIKRTLEREIQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARFSE
ITLHAVRSACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDVLADQLIS
YGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACLVLY
QMCMEDPVATVVDVVSKPKSKWRPLPLDTVELEKLASRKLKINAKETMTIAEKLYTKGYI
SYPRTETNIFPKELNLSALVEQQTQDPNWGEFAQRILDQGGPNPRSGTKSDQAHPPIHPT
KYTSSLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANEQFIAQGLMILARNYLEV
YPYDKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATHAE
HIETIKTRMYVGLTADQRFLPGQLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYLGEAAEIPEQDEVYPAMPVSVRKCPQ
CNSDMVLKTRKNGGFYLSCMGYPACKTAVWFPDFVLDVTRDDSICDVCKPHPVHRLKFKF
KKGSVPPVMPLEFVGCIGGCDEMLKELLDLKYLHRSSQPASSTTQPVHHLQANHSLNRAS
TETRQARGTSNLARGHLLSINSSRTPRAAPPAAADDGNAVVCNCGSEALLLTVRKEGPNK
GRQFYKCSSSACNFFLWADEQPQDRGPAAPHGSTLLQPAAGRAPAGFQRPGGGREPLGSS
SSDAGGGVVCRCDQPAVTRTVQKDGPNKGRQFHTCPKPREQQCGFFQWADENVAPGPSGD
DSLNHFGSNGYSRGLGSKAKRPGNVSSGSAAKKPRTCSICHQPGHTRKTCPQNH
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctacgtgcggctgtttaccaggggcaggatgctgccccagccctggcgcttc
ttttcgcgggccgcggaggacttggcgctgcagaggatccgcaaggtcctgtgcgtggcg
gagaagaacgatgctgcccgagggatcgctgagctgctctccaacagcaggatgcggcgg
cgagaaggtttttccaagttcaacaagatctatgaatatgactaccagatatttggtcag
aacgttaccatggtgatgacatccgtgtcaggacatttattggctcatgattttatcatg
ccatttcgcaaatggcatagctgcaaccctttagctctttttgatgctgaaattgagaag
tattgccctgaaaattacttggatatcaagagaacccttgaacgagaaatccagcagtgc
caagccctggtgatctggactgactgtgatcgagagggagagaacatcggctttgagatc
atccacgtgtgcaaagctgtaaagccaaacctgcaggttttccgagcccggttctccgag
atcacgctccacgctgtcagatcagcctgtgagaacctcacccagcccgaccaaaaaacc
agcgatgccgtcgacgtcaggcaggagctggacctcaggataggtgctgccttcaccaga
ttccagactctgaggctgcgtaagatcttccctgatgttttagcagatcagctgatcagc
tatggcagctgccagttcccaacactgggatttgtagttgaacgctttaaagccatccag
gcctttgttcctgaagccttctacaaaataaaagtgacccatgaccatgaagacggcagc
gtggtcttcaactggaagaggaaccggctcttcaatcacacagcatgcctggtcctttac
cagatgtgtatggaggatccagtagcgactgttgttgatgttgtgagcaagccaaagagc
aaatggaggcccctgcccctggacactgtggaactggaaaaattggcttcccgcaaactg
aaaataaatgcaaaggaaactatgacaatagcagaaaaactctatactaaagggtacatt
agttaccctcgaactgagaccaacattttccccaaggagctgaacctctctgctttggta
gaacagcaaacacaggacccaaactggggagagtttgcgcagaggattttggatcagggt
gggccaaaccctcggagtggaaccaaatctgatcaggctcaccctcccattcaccccaca
aaatacaccagcagcctgcagggcaatgagcagagactctacgaattcatcgtgcgccac
ttcctggcttgctgctctcaagatgccaaaggacaggaaacaactgtggagatcgacatt
gccaacgagcagttcattgctcaaggactcatgatcctggcccgaaattacctggaagtg
tatccttatgacaagtggagcgataaggttatcccgctgtatcagaaagggtctcgcttt
cagcccaccacagtggagatggtggatggggaaaccagtcctcccttgctcctcacagaa
gcagatctcattgctctcatggaaaaacacggcattgggactgatgccacacacgctgag
cacatcgagacgatcaagacgcggatgtacgtggggctgacggcagatcagcgcttcctg
cccggccagctgggcatggggctggtggaaggctatgattccatgggctatgagatgtcc
aagcctgaccttcgagctgagctggaggctgatctaaaactgatctgtgaggggaagaag
gacaaatctgtagtgttgcagcagcaggtccaaaagtacaagcaagtcttcattgaagct
gtggccagagccaacaagttggaccaggccctggctcagtatctgggagaagctgcagaa
attccagagcaggatgaggtgtacccagcaatgcccgtttctgttcggaaatgtccccag
tgcaacagtgacatggtcctgaagaccaggaagaatggcgggttctacctcagctgcatg
ggctatccagcctgtaaaactgcagtctggttccctgattttgtgctggatgtgaccagg
gatgacagcatctgtgatgtatgtaaaccacatccagttcacagactgaagtttaaattc
aaaaagggcagtgttccccctgtgatgcccttggagttcgttggctgcattggaggctgt
gatgagatgctgaaagagcttttggacctcaagtacttgcatagatcatcccagcctgca
tcatccaccacccagccagtgcatcacctgcaggccaaccactcactgaacagagccagc
actgagaccaggcaagccagggggacctcaaacctggcacggggacacctgctttccatc
aactcctccaggactcccagggctgctcctccagctgctgcagacgatgggaatgctgtg
gtgtgcaactgtgggagcgaggcgctgctgctgaccgtgcgcaaggaggggcccaacaag
ggccgccagttctacaagtgcagctccagcgcctgcaacttcttcctctgggctgacgag
cagccacaggacaggggccctgcagctccacacggctccacgctgctccagcccgcagct
ggaagagccccggcgggattccagcgcccaggaggagggagggagcccttgggaagcagc
agctctgacgctggaggtggcgtggtgtgcaggtgcgaccagcccgccgtgacgcgcacc
gtgcagaaggacgggcccaacaagggcaggcagttccacacctgccccaagccccgggag
cagcagtgtggcttcttccagtgggcagacgagaacgtggcaccaggcccttctggagac
gactctttgaaccactttggcagcaatggatactccagagggttgggaagcaaggccaag
agaccaggcaatgtctcctcaggatctgctgccaagaaaccacggacctgcagcatttgc
caccagcctgggcacacgaggaaaacctgccctcagaaccactga
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