Sylvia atricapilla (blackcap): 136367989
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Entry
136367989 CDS
T10263
Symbol
SOX8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136367989 (SOX8)
Transcription factors [BR:
sati03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
136367989 (SOX8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
136367989
NCBI-ProteinID:
XP_066185983
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All DBs
Position
15:complement(6445967..6449482)
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AA seq
466 aa
AA seq
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MLNMTEEHDKALEAPCSPEGTTSSMSHVDSDSDSPLSPAGSEGLGCAPAPAPRPPGAAAL
GAKVDAAEVDERFPACIRDAVSQVLKGYDWSLVPMPVRGNGSLKAKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQP
RRRKSVKAGQSDSDSGAELSHHAGTQLYKADTGLGGMADSHHHGDHTGQPHGPPTPPTTP
KTDLHHGGKQELKHEGRRLAESGRQNIDFSNVDISELSSEVINNMETFDVHEFDQYLPLN
GHAALPAEHGPAAASYAGSYSHSATAQVWTHKSPASASPAAAEPGQQRPHIKTEQLSPSH
YSEQPHGSPAHGDSYGSYGGQACATSAAPAAAAASFSSSQCDYTDLQSSNYYNPYPGYAS
SLYQYPYFHSSRRPYATPILNGLSIPPAHSPTANWEQPVYTTLTRP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatgaccgaggagcacgacaaagcgctggaggctccgtgcagccccgagggc
accaccagctccatgtcccacgtggactcggactcggactcgccgctctcccccgccggc
tccgaggggctgggctgcgcccccgcgcccgccccgcgcccgcccggcgccgccgcgctg
ggggccaaggtggacgcggccgaggtggacgagcgcttccccgcctgcatccgcgacgcc
gtctcgcaggtgctcaagggctacgactggagcctggtgcccatgcccgtccgcggcaac
ggatcgctcaaggccaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcg
caggccgcccgcaggaagctggccgaccagtacccgcatctgcacaacgccgagctcagc
aagaccctgggcaagctctggcgtttattgagcgaaaatgagaaacgtccctttgtggag
gaagccgagcgcctcagggtgcagcacaaaaaggatcacccggattacaaataccagccc
cggaggaggaaaagcgtcaaagccgggcagagcgactcggactcgggggctgagctgagc
caccacgccggcactcagctctacaaggccgacacggggctggggggcatggccgactcc
caccaccacggcgatcacacaggccagccccacgggccccccacgccgcccaccaccccc
aaaaccgacctgcaccacggcggcaagcaggagctgaaacacgagggccggcgcctggcg
gagagcggccgccagaacatcgacttcagcaacgtggacatctcggagctcagcagcgag
gtcatcaacaacatggagaccttcgacgtgcacgagttcgaccagtacctgcccctgaac
ggccacgccgcgctgcccgccgagcacggccccgccgccgcctcctacgccggctcctac
tcgcactcggccacggcgcaggtgtggactcacaagagcccggcctcggcgtcgccggcg
gcggctgagccgggccagcagcggcctcacatcaagacggagcagctgagccccagccac
tacagcgagcagccccacggctccccggcgcacggcgactcctacggctcctacggcggc
caggcctgcgccacctcggccgccccggccgccgccgccgcctccttctccagctcccag
tgcgactacacggacctgcagagctccaactactacaacccctaccccggctacgcctcc
agcctctaccagtacccgtatttccactcgtcgcgccgtccctacgccaccccgatcctc
aacgggctgtccatcccgccggcgcacagccccaccgccaactgggagcagcccgtctac
accaccctcaccaggccttaa
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