Sylvia atricapilla (blackcap): 136367991
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Entry
136367991 CDS
T10263
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sati04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
136367991 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
136367991 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136367991 (NPC1)
Transporters [BR:
sati02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
136367991 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
136367991
NCBI-ProteinID:
XP_066185989
LinkDB
All DBs
Position
1:complement(105876138..105902915)
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AA seq
1285 aa
AA seq
DB search
MGTLQGSPGQGGLGFLVLLLLLWPVRVLPQTCVWYGECGVASGDKRYNCAYDGPPIALPE
DGYDLMQELCPGLFFGNVSTCCDVHQLQTLKNNLQLPLQFLSRCPSCFYNLINLFCELTC
SPNQSDFLNVTSTIPYYDPVLKENKSSITELQYFIGDRFANAMYNACKDVEAPSSNVKAL
GLLCGKDVKDCNATNWIEYMFSKDNGQTPFSIIPIFSDVPVHGMNPMNNATKGCNESVDD
STGPCSCQDCSIVCGPKPQPPPLPPPWLLFGLDAVYVIMWISYMGFLLIFFALVFGVWCY
RRRHFVSEYTPIDSNVAFSGNSHRDNGNITCGERLGERFENGLRMTFTSWGAFCVRNPRP
VILFSVVFVAMCCSGFVYIKATTNPVDLWSAPNSQARREKEYFDTHFGPFFRTEQIIIQA
PKSHPDTYSPYPSGEDVPFGPPLTKDILHQVLDLQNAIVNITASYDNETVMLKDICLAPL
APYNNNCTILSVLNYFQNSHSVLDHSVGDEFYVYADYHTHFLYCVRAPASLNDTSLLHDP
CLGTFGGPVFPWLVLGGYDDDNYNNATALVITFPVNNYYNDSKKLMKALAWEKEFINFLK
NYNNSNLTISFSAERSIEDEIERESNSDISVVLISYIVMFVYISIALGHIQSCRRLLVDS
KISLGIAGILIVLSSVACSIGIFSYFGIPLTLIVIEVIPFLVLAIGVDNIFIMVQTLQRD
ERLQGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVRTFSLFAGMAVLIDF
ILQVTCFVSLLGLDIRRQESNRLDILCCIKSSEETGGVQRSESMLFLFFKNLFSPYLLKD
WMRPIVIAVFVGILSFSAAVMHNVEIGLDQSLSMPDDSYVIDYFSHISKYLHAGPPVYFV
LEEGHNYTSLEGQNMVCGGMGCNNDSLVQQVFNAAEIGSYTRIGYAPSSWIDDYFDWVKP
QSSCCRVYNTTGQFCNASVSDPSCTRCRPLTQEGKQRPQGEDFMTFLPMFLSDNPNPKCG
KGGHAAYNSAVNFINNKTEVGATYFMTYHTVLKTSSDFIDAMRKARIIADNITETMGIKE
KNYRVFPYSVFYVFYEQYLTIVHDAIFNLCISLGSIFLVTTVLLGFEVWAAVVVSITIAM
IIVNMFGVMWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTISTKGSRVERAEEALSH
MGSSVFSGITLTKFGGIVVLAFSKSQIFKIFYFRMYLAMVVLGATHGLIFLPVLLSYIGP
SANKAKTRAAQERTRGTERERLLYF
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggggacccttcagggcagccccgggcaaggcggcctcggcttcctcgtcctcctcctg
cttctgtggcccgtgcgggtacttccacaaacgtgtgtctggtatggagaatgtggagtt
gcttctggagacaagaggtacaactgtgcttatgatgggccaccgatagcactaccagaa
gatggctatgacttaatgcaggaactctgtccaggtttattctttggcaatgttagcact
tgctgtgatgttcatcagcttcagactttgaaaaataacttgcagctgcctctgcagttt
ctctccagatgtccatcgtgtttttacaacttgataaacctcttctgtgagctgacttgt
agtccaaatcagtctgactttttgaatgttacgagcaccataccttattatgatccagtt
ttaaaagagaacaaaagtagcattacagagctgcagtactttattggagatcggtttgca
aatgcaatgtacaatgcctgcaaagatgtggaggctccatcgagcaatgttaaagcactg
gggttgctgtgtgggaaggatgtcaaggactgcaatgcaaccaactggattgagtacatg
tttagtaaagacaatggacaaactcctttcagcataattccaatcttttcagatgttcct
gtccatggaatgaaccctatgaataatgctaccaaaggctgtaatgagtctgtggatgat
tcaacaggaccatgcagctgtcaggactgttcaattgtttgtggtccaaaacctcaaccc
cctccattgcctcctccttggctactgtttggtttggatgcggtgtatgtcatcatgtgg
atctcatacatgggctttctactcatattttttgcactagtttttggagtctggtgttac
aggaggcggcactttgtttcggagtacaccccaattgacagcaatgtagccttttctggg
aattcccaccgtgacaatggaaacattacctgtggtgaaagacttggtgaaaggtttgag
aatggcctgaggatgacatttacatcatggggggctttctgtgtcagaaatccacgtcct
gttatcctcttctctgtggtctttgttgcaatgtgctgctcaggctttgtctatattaaa
gcaactacaaatcctgtggatctctggtcagccccaaacagccaagcccgcagggagaag
gaatactttgacacacactttgggcctttcttccgtactgaacaaattattattcaagca
ccaaagagccacccagacacctactcaccttacccatcaggagaagatgtaccttttggg
cctccccttaccaaagatattctccatcaggtactggatttgcagaatgctattgtcaac
ataactgcttcttatgacaatgagactgtaatgctgaaagacatttgcctggctcctctt
gctccctacaataacaactgcactatcctgagtgtactcaactactttcagaacagccat
tccgttctggatcacagtgttggggatgagttctatgtctatgctgattaccacactcac
ttcttatattgtgttcgggctccagcatcactgaatgacacaagcttgcttcacgatccc
tgtttaggaacatttggtggacctgtatttccatggctggtgttgggaggatatgatgat
gataactataataatgctacagctcttgttattacttttcctgtcaacaattactacaat
gactcaaaaaagctgatgaaagccttggcatgggaaaaagaatttattaactttctgaag
aactataataattcaaacttgactatatcattttctgctgaacggagtattgaagatgag
atcgagcgcgaaagcaacagtgatatcagtgttgtgttgataagctatattgtgatgttc
gtgtacatctcgatagctttgggacatatccagagctgtagaagactgctggtggattca
aagatctctctgggcattgcaggcatcctgattgtactgagctcagtagcatgttctata
ggcattttcagctactttggaatcccactgacactgattgtgatagaagtaattcctttc
ttggtgctggctattggagtggacaacatcttcattatggttcagacacttcagcgagat
gaacgccttcagggtgaaactctggataaacagattggcagagtcttaggagatgtggca
cccagtatgtttctctcatccttttcggagactgtggcattctttcttggaacactgtct
acgatgccagcggttcgcacgttctccctgtttgctggaatggctgtgctcatagacttc
attctccaagtcacttgcttcgtgagtctcctgggcttggacattaggcgtcaagagagt
aatagactggatattctgtgttgcatcaaaagcagtgaagaaacgggtggagtccagcgc
tctgagagcatgttatttctgttcttcaaaaatctgttttctccatatctgcttaaggat
tggatgagaccaatagtaatagcagtgtttgtgggtatcctgtcattcagtgcagcagtt
atgcacaatgtagagattggactggatcagtctctctcaatgccggatgactcctatgta
atagattacttcagccacatcagcaagtacctgcatgcaggtccccctgtctactttgtc
ctagaagaaggacacaactacacctctttggaagggcagaacatggtgtgtggtggaatg
ggatgtaataatgattcacttgtccagcaagtcttcaatgctgcggagattggtagctac
acgaggataggctatgccccatcatcctggattgatgactactttgactgggtgaagcca
cagtcgtcctgttgcagagtctacaataccactggacagttttgtaatgcttcagtcagc
gatccatcctgcactcgttgtcgaccactgactcaagaaggcaaacagagaccacagggt
gaagacttcatgacctttttgccaatgttcctatcagacaaccctaatcctaaatgtggc
aaaggaggacatgctgcatataactccgctgtcaactttataaacaacaaaactgaggtt
ggagccacttattttatgacttaccatactgtactgaaaacatcatctgattttattgat
gctatgaggaaagctcgaattatagcagacaatattactgaaaccatgggcatcaaagag
aagaactaccgtgtgtttccttacagtgtgttttatgtcttctatgaacaatacttgaca
attgtgcacgatgctatctttaacctctgcatctctttgggatcaatatttctggtgaca
actgtgcttcttggttttgaagtatgggctgctgttgtggtttcaataactattgctatg
ataattgtcaatatgtttggagtaatgtggctctggggcatcagcttgaatgcagtttca
ttagtaaatcttgtcatgagctgtggtatcgctgtggaattctgcagtcatgtgacaaga
gcattcaccatcagtaccaagggcagcagagtggagcgtgcggaagaggctctgtctcac
atgggcagctcagttttcagtggtatcacgctgaccaaatttggaggaattgtagtattg
gctttttccaaatctcaaatcttcaagatattctacttcaggatgtatttagctatggtt
gtgctgggagcaacacacggactgatatttcttccagttctgcttagttacataggccca
tcagcaaataaagctaaaactcgtgctgcacaggagaggaccagaggcacagaacgggag
agactcctctacttctag
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integrated database retrieval system
