Sylvia atricapilla (blackcap): 136367997
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Entry
136367997 CDS
T10263
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04010
MAPK signaling pathway
sati04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
136367997 (CACNA1H)
04020 Calcium signaling pathway
136367997 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136367997 (CACNA1H)
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
136367997 (CACNA1H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
136367997
NCBI-ProteinID:
XP_066186001
LinkDB
All DBs
Position
15:complement(6150409..6259195)
Genome browser
AA seq
2290 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRPDEAEE
NPFICSSHRENGMQRCSNIPSRKESKVECTLSMDSYSPSLGSPEPSRNSCINWNQYYNVC
MAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGS
FFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLASFSEPGSCYEELLKYICHI
FRKVKRRTIRLYNNWQSKRRKKVNPNSGGGGQSQRSRRRITSIHHLIHHHHHHHHHHYHI
SNGSPRGPRANPEICQLELQVMKPGQQLMLPAPASPGPQGPAAPRADAGAVHSIYHADCH
VEGPPGGCKATGASKGAGLGGHGSMNYPTILPSSCGSAALSKGKRNGNSPVAVGNSPGSL
GLDSYGKLQQLVGEHGLRRTPSRLSGLSTAGSLPGPGVPGLSCELQDCPFCATLLDDPDL
ALSDSDSNADSDSNGVYEFTQDLRHGDRRDQLQQQQQRGRRRRRKKKAKERNKVVKLWKA
FGAKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEML
LKLLAFGIFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPAL
RRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLL
WAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAE
GDANRSDTDEDKTSANFEDEFEKLKDLRATEMKMYSLAVTPNGHLEGRGAMPPPIIMRTA
ATPMPTPKCSPHLDSLHALGDSRRGSNASLEPTGYDQKSLSSLRSSPCANWGSRRSSWNS
LGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTLSRPSLSRRAESLDYRGSQEL
PELLRVPSMRQLGPGPAALLPPEFHDCNGKMGPTEFFLRVDGHKEDGLDYEDDGEDSYCY
RIRKALEPYKPQWCKTHEDWSLYLFSPQNRFRVTCQKVIAHKMFDHVVLVFIFLNCITIA
LERPDIDPLSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLV
FVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGN
IVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKADCTNAHYKWVRRKYNFDNLGQ
ALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVG
VVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPARRSIHSLCTSHY
LDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEALLKLVAFGFRRFFK
DRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRAL
LDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAF
LTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAV
LMKHLEESNKEAKEDAEMDAEIELEMSRGSNAAGGSRRGALESRALHGNQEHSEEKHQAL
GSAASLRPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVTPAKAPLPLHEVEMETYPCKAQ
RGSITSIRSQPVGTSSSLRVPLESLPARCPGHEGRHRWKVLAPHGTPRSPSLNKLLCRQE
AVRTDSVDGQTPERKDSLQAEPGEPQPSAKQSQSSLTPSPLHSPLPATPPRSPPSSPHRP
LGPLARKHTCGQHSIPSRPPSPSSSPGPEGCQGEPSDLADEEVRHINSSAKDWAEEHSDP
GSRSTSPFPSPAPSPVPLKNCSTSSLSRKEKDLKKFYSTDTKGFLSKPSWADEQRRHSIE
ICPSGSASDCGFPEPAEDKQRPPGHVQPEADYIHGARRKKKMSPPCISIDPPMEDDGAAA
PRTKPSENTLLRRRTPSCEFPAYRESLELPESQPQCRGEQHLSVPNFSFEQLDGGSLSSL
SELLDSGQPTPGSADSRPDVELKKTDHLKTQRGNGERGKELLGTAKSPLHKQDLGPAVTV
ATEEGTEDPV
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgcgtcaccctgggcatgttccagccctgcgaggacgtg
gagtgccagtcggagcgctgcaccatcctggaggcgtttgatgacttcattttcgccttc
tttgccgtggaaatggtgatcaagatggtggccctgggcatcttcgggcagaagtgttac
cttggggacacctggaaccgcctggacttcttcatcgtcatggcagggatgatggaatat
tccctggatggacacaacgtcagcctctcggccatacgcaccgtgcgcgtcctgcggccc
ctgagggccatcaacagggtcccaagtatgaggatcctggtcacgctgctgctggacact
ctgcctatgttaggcaacgtcctcctcctctgcttcttcgtcttcttcatctttgggatc
gtcggggtccagctctgggcagggctgctgaggaacaggtgcttcctcgacaggaatttt
gccatgacctacaacctgaccttcctccacccctactaccgcccggacgaggccgaggag
aaccccttcatctgctcctcgcaccgggagaacggaatgcagcggtgctccaacattccc
agcaggaaggaatccaaggtggagtgcaccctgagcatggactcctacagccccagcctg
ggcagccccgagcccagcaggaactcctgcatcaactggaaccagtactacaacgtctgc
atggccggggacgtcaacccccacaacggggccatcaactttgataacattggatatgcc
tggattgccatttttcaggtgataaccctggaaggatgggtggacatcatgtattatgtg
atggatgcacactctttttacaattttatatattttatattgcttatcatagtcggctcc
ttcttcatgatcaacctgtgcctggtggtgatagccacccagttttcagagaccaagcag
cgggagaaccagctgatgcaggagcagcgggcgcgctacctgtccaacgacagcaccctg
gccagcttctcggagccgggcagctgctacgaggagctgctcaagtacatctgccacatc
ttcaggaaggtgaagagaaggacaatccgcctctacaacaactggcagagcaaacgccgc
aaaaaggtgaaccccaacagcggcggcggcgggcagagccagcgcagcaggaggaggatc
acctccatccaccacctgatccaccaccatcaccaccaccaccaccaccactaccacatc
agcaacgggagcccgcgggggcctcgggccaaccccgagatctgccagctggagctgcag
gtgatgaaacccgggcagcagctgatgctcccggcgcccgcctctcccggcccgcagggt
cccgccgctccccgcgccgacgccggcgccgtgcacagcatctaccacgccgactgccac
gtggaggggccccccgggggctgcaaggccaccggggccagcaaaggggccgggctgggc
ggccacggcagcatgaactaccccaccatcctgccctcgtcctgcggctccgccgccctg
agcaaggggaagaggaacgggaattctccggtggccgtggggaacagcccagggagtttg
gggctggattcctacgggaagctgcagcagctggtgggagaacatggtctccgccggacg
cccagccggctgtcggggctgagcacggcggggtctctgccgggcccgggtgtcccgggg
ctgagctgcgagctgcaggactgtcccttctgtgccaccctcctggacgaccccgacctg
gccctcagcgactcggacagcaacgccgactccgacagcaacggcgtctacgagttcacg
caggacctgcggcacggcgaccgccgggaccagctgcagcagcagcagcagcggggcagg
aggaggaggaggaagaagaaggccaaggagaggaacaaggtggtgaagctgtggaaggcg
ttcggcgccaagctcaagaggatcgtggagagcaaatacttcaaccgcgggatcatgatc
gccatcctcatcaacaccctcagcatgggcatcgagtaccacgagcagcctgacgagctg
accaacgccctggagatcagcaacatcgtcttcaccagcatgtttgccctggagatgctc
ctgaaactcctggcctttggaatctttggctacatcaagaacccctacaacatcttcgac
gggatcatcgtcgtcatcagtgtgtgggagatcattgggcagtcggacgggggtctgtcc
gtgctccgcacgttccgcctgctccgcgtgctgaagctggtgaggttcatgcccgccctg
cgccgccagctcgtggtgctcatgaagaccatggacaacgtggccaccttctgcatgctg
ctcatgctcttcatcttcatcttcagcatccttggcatgcatctttttggatgcaagttc
agcctgaaaaccgacacgggggacacggttccagacaggaagaattttgattccctactt
tgggccattgtgaccgtgttccagatcctcactcaggaggactggaacgtggtgctgtac
aatgggatggcctccacctcctcctgggccgccctctacttcgtggccctgatgaccttt
ggcaattacgtgctcttcaacctcctggtggccatcctggtggaaggattccaggcagag
ggagatgccaacaggtcagacacagatgaggacaaaacatctgccaactttgaggacgag
tttgagaagctgaaagacctcagagcaacagagatgaagatgtactcgctggctgtcacc
cccaacgggcacctggagggcaggggggccatgcccccgcccatcatcatgcgcacggcc
gccaccccgatgcccaccccaaagtgctccccacacctggactccctgcacgccttgggg
gactcgaggagaggcagcaacgcctcgctggagcccacgggctacgaccagaagtccttg
tccagcctccgcagctccccctgcgccaactggggcagccgccgctccagctggaacagc
ctgggccgggctcccagcctcaagaagaagaaccagtctggagaacgggaatcgctgctg
tccggggagggaaagggcagcaccgacgacgactcggatgacgccaaatccagcacgctc
agccggccgtcgctgtcccggcgggcggaatccctggattaccgcggctcccaggagctg
cccgagctgctcagggtgccctcgatgaggcagctggggccgggccccgccgcgctgctg
ccgccagaattccacgactgcaacggcaagatgggccccaccgagttcttcctcagggtg
gacggccacaaggaggacgggctggactacgaggatgacggggaggatagttattgctac
cggatccgcaaagccctggagccctacaaaccccagtggtgcaagactcacgaggactgg
tccctctacttgttttccccacagaacaggttccgagtgacgtgccagaaggtcattgcc
cacaaaatgtttgaccacgtggtgctggtctttatcttcctcaactgcatcaccatagct
ctggagagaccagacatcgaccccctgagcacggaaaggatattcctaagtgtctctaat
tacatcttcactgccatcttcgtggctgaaatgatggttaaggtggtagctcttggcttt
ttctctggggagaacacgtacctgcagagcagctggaacgtcctggatggagtcctggtc
tttgtgtccatcattgacatcattgtgtccatggcatcagcaggaggagccaaaatcctg
ggagtccttcgtgtgctgaggctcctgcggaccctgagacctctccgagtcatcagcaga
gccccaggtctgaagctggtggtggaaaccttgatctcctccttgaggcctattgggaat
attgttctcatctgctgtgctttcttcattatctttgggattttaggggtccagcttttt
aaaggcaagttctactactgtgatggtcctgatgtcaaaaacatcaccacgaaggctgac
tgcaccaacgctcactacaaatgggttcggaggaaatacaacttcgacaatttgggccag
gccctgatgtccctgtttgtcctctcctccaaggacggctgggtgaacatcatgtacgac
gggctggacgccgtgggcatcgaccagcagcccatccagaaccacaacccttggatgctg
ctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggg
gtggtggtggagaacttccacaagtgccggcagcaccaggaggcggaggaggcgcggcgc
cgggaggagaagcggctgcgccgcctggagaaaaagcgcaggaaagcccagcgccggccc
tactacgccgactactccccggccaggagatccatccacagcctgtgcaccagccactac
ctcgacctcttcatcaccttcatcatcggcgtcaacgtcatcaccatgtccatggagcac
tacaaccagcccaagtccctggatgaagccctcaagtactgcaactacgtgttcaccatc
gtctttgtgttcgaggcgctgctgaagttggtggcctttggtttccgcaggttttttaag
gacaggtggaaccagctggacttggccatagttctgctgtcgattgtgggcatcacgctg
gaggagatcgagatgaacgctgccctgcccatcaaccccaccatcatccgcatcatgagg
gtgctcaggattgccagagtgctgaagctgctgaaaatggccacgggcatgagagctctg
ctggacacagtggtgcaagccctgccccaggtagggaaccttggcctactttttatgctc
ctgttttttatctatgctgccctgggagtggaattgtttggcaagctggattgcagtgaa
gagaatccctgtgagggcctgagccgccacgccaccttcaccaactttggcatggccttc
ctcaccctcttcagggtgtccacgggggacaactggaacgggatcatgaaggacacactc
cgggagtgcactcgtgaggacaagcactgcctcagttacctgcccgtcatctcccccgtc
tacttcgtcaccttcgtcctcatcgcccagttcgtcctggtcaacgtggtggtggcagtg
ctgatgaagcatctggaggagagcaacaaggaggccaaggaggacgctgagatggacgct
gagatcgagctggagatgtccagaggcagcaacgccgccggcgggagcaggaggggggcc
ttggagagccgggcactgcacgggaaccaggagcacagcgaggagaagcaccaagccctg
ggtagtgcagcctccctgaggccccaggattcccagaacctgctgacagtccggaagatc
tccgtgtccaggatgcattccctgcccaatgacagctacatgttccggcccgtgactcca
gccaaggccccgctccccctgcacgaggtggagatggaaacctacccctgcaaagcccaa
agaggatccatcacctccatccgctcccagcccgtggggacgagctcctctctgagggtg
cccctggagtcgctgcccgcgcgctgccccggccacgaagggcggcaccgctggaaggtc
ctggctccccatggaaccccccgatctccttctctcaacaagctgctctgcagacaggag
gccgttcggacggactcggtagacggacagactccagagcgcaaagacagcctgcaagca
gaacctggagagccccaaccatcagcaaagcagtcccaaagctccctcacccccagccct
ctccattcccccctcccggccacccctccacgttcccctccatcctccccacaccggccc
ctgggccccctggcacggaagcacacttgtggccagcacagcattcccagccggccgccc
agccccagcagctcccccggccccgagggctgccagggggagccctcagacctggctgac
gaggaggttcggcacatcaacagctcggccaaagactgggcagaggagcactcggacccc
ggcagccgctccacctcgcccttcccctccccggccccgtcccccgtgcccctcaagaac
tgcagcacaagcagcctctcccgcaaggagaaggacttgaagaagttctacagcaccgac
accaagggcttcctcagcaagcccagctgggccgacgagcagcggcggcactccatcgag
atctgcccctccggcagcgcctcggactgcggcttcccggagcccgccgaggacaagcag
cggccccccggccacgtccagcccgaggccgactacatccacggagcccggaggaagaag
aagatgagcccgccctgcatttctatagatcctcccatggaggacgacggcgcggcggcc
ccacgcaccaaaccctccgagaacaccctgctgcggaggagaaccccgtcctgcgagttc
ccggcctaccgagaatccctggagctcccggagagccagccccagtgccgaggggagcag
cacctcagcgtccccaacttctccttcgagcagctggacggcggctccttgagcagcctc
tcggagctgctggacagcggccagcccacgccgggctcggcggactcgcggccggacgtg
gagctgaaaaagacggatcacttaaaaactcagcggggcaacggcgagaggggcaaggag
ctgctgggcaccgccaagagccccctgcacaagcaggacttgggccccgccgtgactgtg
gccacagaagaaggcacggaggacccagtatag
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integrated database retrieval system
