Sylvia atricapilla (blackcap): 136368022
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Entry
136368022 CDS
T10263
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136368022 (RBBP6)
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136368022 (RBBP6)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
U-box type E3
136368022 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
136368022
NCBI-ProteinID:
XP_066186048
LinkDB
All DBs
Position
15:7500252..7529170
Genome browser
AA seq
1794 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQQQQ
LPPPPPPPPPPLMRQTITRTLQPLMRPAMARQQDPLMIPLASLASRSALSSLGPGPSMAA
GLPVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPALMTAAELSKSSPLSISSLL
EEKGYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQ
APSLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYP
PAPANMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDF
AKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSR
SYSRSPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRAV
PQSDAEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAV
GAQPRPPVSRENFSPERFGPPGTRRENSPYARGRREEYPAGQSHRNRNVAGNYPEKPGRE
SHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNVELLEGARKPREPVPT
EDAKTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKVEKTKRKAEAA
AAPKKDNAAKPPKASQEKVDPDREKSPRMEPPVKKVKEEVPKTDSVKTSSSQKDEKALGT
PRKAHPKVAKDHPEIRPAKEEKAKKEHPKEAKAEKPSSKEDKSKKPAEKSKLSDAKLEKR
KRKAEEKADKEHEATSAKASKAETAELKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKK
IKLNRETGKKIVSGENVPPGKEAVEKPEPSSSKVKAEKAKGKARRKVTAADGTSSTLVDY
TSTSSTGGSPVRKPEEKPDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFES
EEEDIKSTTQLPPTVGKPTSVIKPVSAKAPNPLKHTEKETEPLEKTQKAAKEASYEGTQH
DAKSSKSSVSSEKGKTKDRDHSLSDKDSSEKRKSGVQPEKEHSERAAEQGNGKTVSQSSK
DGRSSEKHDSGRGSAAKDFTPNRDKKSDHDSSREHSSSKRRDEKSESARRKDSPSRVRDS
TAVQKSKPREERVEPPKKGPAEAKRSSYSPPRERKPPEHKAVHDPKRPAEEHKPPDKNPG
KEKEKEKEKEKHVPEVKSNKEKEQKEPAGNKPPVKQDSPEVKVEKESAAGQSDKGAVKAK
PPPCSAARLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAVDKVKE
EAAAPAPAEQPEAGRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKE
KKKHKKHKKHKKHKKHVGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggctgactgcgacctgcagatcaccaacgcgcagaccaaagaagagtacaccgatgat
agtgctctgattcccaagaactcatcggtgatcgtgaggagaatccccattggaggagtg
aaagcaacgagcaaaacatacgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaagtgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacccgtggggccacctccaccctcgtacacctgctttcgctgtggcaaacct
gggcactacataaagaactgtccaacaaatggggacaaaaattttgagtctgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacaca
aagggtgccatgctgaccaacactgggaaatacgcgattccaaccatagatgcggaagct
tatgctataggaaagaaggagaagcctcccttcctacctgaggagccatcctcctcctca
gaagaagatgatcctattccagatgaactgttgtgtctcatttgtaaggatataatgaca
gatgcggttgtaattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ctactggagtctgaggagcacacgtgccctacctgccatcagacagatgtttctcctgat
gctttaatcgccaacaagtttctgcgccaggctgttaacaacttcaaaaatgaaaccggt
tacacaaaaaggctccgtaagattcagcagcagcagcaacagcaacaacagcagcagcag
ctgccaccaccaccaccgccgccgccgccgcccctgatgcggcaaaccataacgcgcacc
ctgcagccgctgatgcgcccggccatggcccggcagcaggacccgctcatgatcccgctg
gcctccctggcctcccgctccgccctctcctccctgggccccgggccgtccatggcagcc
gggctgcccgtcaatccgtcatccgtggttgtctctgatctccctccagctgtgtccctc
tctctccgcggggaaaagccagacggacctttccgtgatgccgatgctgttttgcctcct
gctctgatgactgctgctgagctttccaaatcttcccctttgtcaatcagcagtttgttg
gaagagaagggctatcaggttcctgtgctgagacaaccagcgataccaagtcttctgggc
cctcaaggacaatcaatacccacaactggtcatccaatgagggctggtgcacttcgcagg
ccaggctgggaactttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcag
gccccatcactgccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtat
cctccaccaccccatgctcttcctcttcctccgggggtaccaccaccacagtttcctcct
cagtttccacctgggcagcctccatccgctgggtacactgtcccccctcccggatatccc
ccagctcctgcaaacatgtcatcagcttgggtcccaacagcagtgccagcggctcattca
aacaccatcccaacgacacaagcacctcctctctctagggaggagttttacagagagcaa
cggaggcttaaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgatttt
gctaaggaattgatggaatataaaaagattcaaaaggagcgtaggcgttcgttttccagg
tccaagtctccctatagtgcttcatcctactctagaagctcgtacacctactccaagtca
cgctcaggttcatcgcgctcccgttcctactcgcgctccttcagccgctcccattcccgc
tcctactcacggtcgccgccgtaccagagacgaggcaaagggaagagtcggaactaccgc
tcccgttcccggtcccacggctaccaccgctcccgctcccgctcgcccccgtaccggcgc
taccactcccgctcccggtcccccgtgttccgcggccagtcccccaccaaacgcgccgtc
ccgcagagcgacgccgagcgggagtacttcaaccgctacagggaggtgcccccctacgac
atgaaggcgtactacggccgctcggtggacttcagagacccctttgagaaggagaggtac
agagagtgggagaggaactacagagagtggtacgagaagttttacaagggctacgccgtg
ggcgctcagccacggcctccagtgagcagagagaacttctctcctgaaaggtttggcccg
cctgggaccagacgagagaattcaccgtatgctcggggacggagggaagagtatcccgct
gggcagagccacaggaatcgtaacgtagctggaaactaccctgaaaagcctgggagagag
agccatggcatcaaagatcctacaaagtcaaaagagaaggaggtggaaaatccactggga
gatggcaaaggcaataaacataaaaaacaccggaagagaagaaaaggagatgagaatgaa
ggatttcccaacgttgagctgttagaaggggcaagaaaaccaagagagccagttccaaca
gaagatgctaaaacagactctctgttcatgctgccaagtagggatgatgccacccctgta
agggatgagcccatggaagcagattctattgctttcaaaccagtgtctgaaaaggagaaa
aaagagaaggataagccaaaagcaaaggttgagaagacaaagcggaaagcggaagcagcg
gctgctccgaagaaggacaacgcagcaaaaccgcctaaagcttcccaggaaaaggtggac
cccgatcgagagaaatcgcctcgaatggaacctcctgtgaaaaaagtcaaggaagaggtg
ccaaagactgacagtgttaaaacctcttcctctcagaaggatgagaaggctcttggtaca
ccacggaaggctcatcccaaagtggcaaaggatcacccagaaatcagaccagccaaggag
gagaaggcaaagaaggaacatcctaaagaagccaaggcagagaagccttccagcaaggag
gataaatcaaaaaaacctgctgagaaaagcaaactttctgatgccaaacttgagaaaagg
aaaagaaaagccgaggaaaaagctgataaagaacatgaagctacttctgcaaaggcctct
aaagctgaaactgcagaactgaaaacatcacccaaggggaaagctgagcccgagggggag
aaaggagagcggacaccagaaaaggataaagctgcttttcttaacaacccgtccaagaag
attaaacttaaccgagaaactggaaaaaagattgtgagcggagaaaacgtgccacctgga
aaagaggctgtggagaaacccgagcccagcagcagcaaagttaaagcggaaaaggcaaag
ggaaaagcaaggaggaaagttacggcagctgacggcactagctcgactcttgtggattac
accagcacaagttccactgggggaagccctgtcaggaagcctgaggagaagccagacacc
aaacgaactgtcattaagaccctggaggagtataacaatgacataacagcccctgctgag
gatgtcattatcatgatacaggtccctcagtccaagtgggataaagatgactttgagtct
gaagaggaagacatcaaatctaccacccagctgcccccaactgtaggaaaacccaccagt
gttatcaaacctgtgagcgcaaaggcaccaaaccccctcaaacacactgaaaaggagaca
gagcctctggagaaaacacagaaagctgcaaaagaggcgagttacgaaggcacccaacat
gatgccaagagttcaaaaagttccgtgtcgagtgagaaaggtaaaaccaaagaccgggat
cattctttgtctgacaaggacagttctgagaagagaaagagcggtgttcagccagaaaaa
gagcactcagaacgtgcagctgaacagggaaatggaaaaactgtgtctcaatcttccaaa
gatggcagatcttcagagaagcatgatagtggccgtggctccgctgcaaaggactttact
cccaaccgagacaagaagtctgaccatgacagcagcagggagcattcgagttccaagcgc
agggatgagaagagtgaatcggcacggaggaaagactccccatcccgggtcagagactcc
acagcagtgcagaagagcaaaccaagagaggagcgtgtggagccacccaagaagggccct
gcagaggccaagaggagcagctacagccccccgcgggagcgcaagcccccggagcacaaa
gctgtgcacgaccccaagcgccccgccgaggagcacaaacctccggataaaaacccaggc
aaagagaaggagaaagagaaagagaaggagaaacacgtgccagaagtcaagagcaataag
gagaaagagcagaaagagccagctgggaataaaccacccgtgaaacaggactcgccggag
gttaaagtggagaaggagagcgcggcgggtcagagcgataagggcgcggtgaaggcgaag
ccgccgccctgcagcgccgcgcgcctctcctccgacctcacccgcgagaccgacgaggcc
gccttcgtgcccgactacaacgagagcgacagcgagagcaacgtgtctgccaaggacgag
gaggccgcggggaaaacgcccaaggaagccaaggaaaaggccgtggataaggtgaaagag
gaggcggcagccccagctcccgccgagcagcccgaggcgggcaggagccagagccagagc
agccccagcgtcagccgcagccgcagccacagcccctccgagagccagacacggagccac
agcagcagtgccagctcaggggagagtcaggacagcaagaaaaagaaaaagaagaaagag
aagaagaaacacaagaagcacaagaaacacaagaagcataagaaacatgtgggcaatgaa
acagaattggaaaagagccaaaaacacaaacacaagaagaaaaaatcgaagaagagcaaa
gataaagagaaagacgaccaaaaagtgaaatctgtcacgacataa
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integrated database retrieval system
