Sylvia atricapilla (blackcap): 136368212
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Entry
136368212 CDS
T10263
Name
(RefSeq) desmoglein-4-like
KO
K07599
desmoglein 4
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136368212
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136368212
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Major cadherins
136368212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
136368212
NCBI-ProteinID:
XP_066186421
LinkDB
All DBs
Position
1:108868471..108890510
Genome browser
AA seq
1177 aa
AA seq
DB search
MDWLPHRTAAFLFLLLVFLDFSSGFHVEVKEWDENGMARWKTFRRQKREWIKFAAACREG
EDNSKRNPIARIRSDCEEDNPITYSISGVGIDRAPYGIFIVNPRTGEINITSIVDREITP
VFVIRCFAKHSVTGVDLEPPLELRVRVLDINDNPPIFAQTVFTGSVEESSMDNTLVMKII
ATDADEPNHLNSKIAFKIESQEPSGPPMFIMNKYTGELHLANYLDREQHSSYTLVVKASD
RDGAADGISSLCSCNVKVIDVNDNFPTLAQSSFSASISENSLSSELLRIQALDADEEFTD
NWLAEFFFISGNEDNCFEIVTDRATNQGILRVIKELDFEHIRSHSLMIGVRNVAAFHHSV
AHEYQIFGTPLTVEVKNLIEPPRFHPSSVVFSLAEGARVNYVVGTYTAMDEDTRTIASNV
VYSIGRDPAAWFRINQNTGEITLNKVINRDSVYVVNGQYQAEVLAITRGSPRYTATGTIV
LSIDGVNANCPTINTEMRKVCMHSPSVIISAKHRDGDLYATPFTFSIHGEPQTTWIIRRI
NDSSAELVGQNIDFYLYRIYVVVRDSQGRRCARPHIIPVQACQCDSRNYCTSGATRIIII
GGGGGGGAAGGGGGGTAGGGGGGTTGGGGGGTGGGGREDAGQGGGDYDQNRPGGGYEDTD
WQSYTDGYDGEGGYTASTDDGYAGNENYGRQFESNTTLSGAAIGLMFLGGLIFVLIPILM
SMSDCCGCGPGAAGGVGTGFEPVPECTEGAIHPWGIEGAQPEDRDVSHILAPTTAAGGDF
GEPSDIYNNTYGGGGVVASGVEETTGVGYGTGTGYGTAGGISGTGEVKGSIGGTIKEYRE
GGVNMAFLDNYFSEKAFVYADEDEGRPANDCLLIYDHEGVGTPVGSVGCCSFIGEDTDET
YLDTLGPKFKTLAEICLGKEIEPFPDVNPPWPGINMSFPSPESDLNLPPPGTTIVVNGSA
PMPPPAGTTTVITENTYTSGTTIQPPRPTPDPLVHGNMTVTETYTSGSPSLSIDPLRASN
VVVTERVVGPASASDLRGMLDIPDLTEGSNVIVTERVIAPNSRLPASLSIPDLVDGSNVV
VTERVFRPASGMPGSLINIPSELSNAHNVVVTERVVSGSGMSSLGGASLGGANLGGLSST
GQMLSADCHLGQGMGTASPGTSRRRVTKYSTVQYSSQ
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggattggctcccgcaccgaacagctgcttttctgttccttttgttggtattcttggat
ttcagctcaggatttcatgtagaggtaaaagaatgggatgaaaatggaatggcaagatgg
aaaacctttagaagacaaaaacgtgaatggatcaaatttgcagcagcttgtagagaagga
gaagataattccaagaggaatccaattgccagaatccgatctgactgtgaagaagacaac
ccaatcacatacagcatctctggagttggaattgatcgtgcaccctatggaatatttatt
gttaacccaagaacaggagaaattaatataacatcaatagtggatagggaaataacacct
gtatttgttatacgttgctttgctaaacactcagtgacaggtgtagatttggagccacct
cttgaacttcgagtcagagtgctggatataaatgacaaccctcctatatttgcacaaacc
gtatttacaggatctgttgaagagagcagcatggacaacacgctggtgatgaaaatcatt
gcaacagatgcagatgaacctaaccatttgaattctaaaattgccttcaaaatagaaagt
caggaaccttctggtccacccatgttcattatgaataaatacacaggagaactccatctt
gcaaattatctcgacagagagcaacatagtagctacactctggttgtgaaggcgtcagac
cgggatggggctgcagacggaatatcatccctttgtagctgtaacgtgaaagttatcgat
gttaatgacaactttccaactcttgctcaaagctctttttcagcaagtatttcagaaaat
tcactcagttcagaactcctacgaatacaagctctggatgctgatgaggagtttacagac
aattggttagcagagtttttctttatatccggtaatgaagataactgttttgaaattgtt
acagatcgagctacaaatcaaggaatccttagagtaattaaggaactggattttgaacat
attcgatctcactcactgatgattggtgtcagaaatgtagctgccttccaccactctgtt
gcacatgagtaccaaatatttggaacacccctcacagtagaagtaaaaaatttgattgaa
ccaccaagattccatccatcttcagttgtgttttccctggcagaaggcgcaagagtgaat
tatgttgtaggaacatacacagccatggatgaggacactagaactattgcatcaaatgtt
gtatatagtataggacgtgacccagctgcctggttcagaatcaaccaaaacactggtgaa
attacactgaacaaagtcattaaccgggattcagtctacgtagtcaatgggcagtaccaa
gcagaggttctggctatcaccagagggtctcctcgctatactgctactggcaccattgtg
ctttcaatagatggtgtcaacgccaattgcccgactattaataccgaaatgaggaaagtt
tgtatgcattccccatcagtgattatttcagcaaagcatagggatggtgatctctatgct
accccctttacattcagcatacatggtgaacctcagactacatggattatcagacgaata
aatgattcctctgcagaactggtgggccagaacatcgacttttacctttataggatctat
gttgttgtaagggatagccaaggccggcgctgtgctagaccacacataattcctgtgcaa
gcttgccagtgtgatagtcggaattactgcaccagtggggccacaagaataattatcatt
ggtggtggtggtggtggtggcgctgctggtggtggtggtggtggcactgctggtggtggt
ggtggtggcactactggtggtggtggtggtggtactggtggaggaggccgggaagatgca
ggacaaggtggtggtgattatgaccagaatagacctggaggaggttatgaagacacagac
tggcagagttacaccgatggctacgacggtgagggaggatacactgcctccacagacgac
ggttacgctggaaacgaaaattacggcagacaatttgaatcaaacaccacacttagtggt
gctgccattggcctgatgtttctcggtggattaatatttgttttgattccaattttgatg
tcaatgagcgactgttgtggctgtggacctggtgctgcgggcggagttggaactggattt
gaacctgtacctgaatgcacagaaggagcaattcatccatggggaatagaaggtgcacaa
cctgaagacagggatgtctcacacattcttgccccaacaactgctgcaggaggtgatttt
ggtgaaccttctgacatatataataacacatatggaggaggaggagtagtagcttctggt
gttgaagaaactacaggtgttggctatggcactggtactggctacggaacagctggagga
atttctggaacaggggaagtaaaagggtcaattggaggaacaataaaagagtatagagaa
ggaggagtgaacatggccttcctagacaactatttctccgagaaagcatttgtgtatgca
gatgaagatgaaggtcggccggcaaatgactgcctattaatttatgatcatgaaggagtc
ggtactcctgttggctccgtgggttgctgcagctttattggagaagatacagatgaaaca
tatttggatacattaggaccaaaatttaagaccctagcagagatctgtctgggcaaagag
attgaacctttccctgatgtcaacccaccctggccaggcatcaacatgtccttccccagc
cctgaaagtgatctaaacctcccgccacctggcaccaccatcgttgtcaacggaagtgca
cctatgcctcccccagctggcactacaacggttattactgaaaacacctacacttctggg
acaaccattcagcccccgaggccaacaccggatcctttggtccatggcaacatgacggtg
accgagacctacacctctggctcgccctctcttagcattgaccctctgcgtgcatccaat
gtcgtcgtgacagagagggttgtcgggcctgcgtctgcctctgacctgcgtggcatgcta
gatatccctgatctcacagagggctccaacgtcatcgtcacagaaagagtaatcgcgcct
aactcccgactcccggcatctctgagcattcctgatttggtagatgggtcaaatgtggta
gtgacagaaagggtgttcaggcctgcctctggcatgccgggcagcctaataaatattccc
tcagagttatccaacgcccacaatgtggtagtcacagagagagtagtgtcagggtctggg
atgagcagcctgggaggagcaagccttggaggagcaaatctggggggcctgagcagcacg
ggtcagatgctcagtgccgactgtcatcttggccagggaatgggcacggcatctccaggc
acctcccggagacgagtgacaaagtacagcaccgtgcagtactccagtcagtaa
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