Sylvia atricapilla (blackcap): 136368232
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Entry
136368232 CDS
T10263
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
sati03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136368232 (RNPS1)
03015 mRNA surveillance pathway
136368232 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136368232 (RNPS1)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136368232 (RNPS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
RRM_ACIN1
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
136368232
NCBI-ProteinID:
XP_066186450
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All DBs
Position
15:15779353..15788412
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AA seq
314 aa
AA seq
DB search
MTPSRRASAAPSRPLASPWRDGRRAAAVLRMAPSPTKRKDRSEEKSKDRSKDKAAAKESG
EKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSSSTGSSSGSSSSSASSRSGSSSTSR
SSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPRPTKVHVGRLTRNVT
KDHIMEIFSTYGKIKMIDMPVDRLNPHLSKGYAYVEFENPDDAEKALKHMDGGQIDGQEI
TATAVLAPRPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSRSPG
RRRHRSRSSSNSSR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacgccatcacggcgcgccagcgctgccccttcccgcccgctggcgtcaccttggcgc
gacgggcggcgagcggcggcggtgctgaggatggctccctcaccaaccaagcgcaaggac
aggtctgaggagaaatccaaggaccgctccaaggataaagcagccgcgaaggagtcgggt
gaaaaggatcgtgggcgggacaagacgcgcaaaagacgcagtgcctccagcgggagcagc
agtaccagatcccgttccagctcaacttctagctcagggtccagctccagcactggttct
agcagtggctcaagttcctcgtctgcctccagccgctcggggagctccagcacctcccgc
agctccagttccagcagctcctctggatctcccagtccctctcgccggagacacgacaac
aggagacgctcccgctccaaatccaaaccacccaagagagatgagaaggagcggaagagg
cggagcccatcacccagacccacgaaagtgcatgttggaaggctcactagaaacgtgacc
aaggatcacatcatggaaattttttccacttacggaaagattaaaatgattgacatgcca
gttgacaggctaaacccacacctctccaaaggttatgcgtatgtggagtttgagaaccca
gatgatgctgagaaagccctgaaacacatggatggaggccagatcgatggtcaggagatc
acagccacagctgtgctggcgccacggcctcgaccacctcccagacgcttcagcccgccc
aggaggatgctgccgccgccgcccatgtggcgccgctcgccgccccgcatgaggaggagg
tcgcggtctcctcggcgcaggtcgcccgtccgccggcggtcccggtcccggtccccgggg
cgcaggcgccaccgcagccgctccagctcaaactcctcaagatag
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