Sylvia atricapilla (blackcap): 136368353
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Entry
136368353 CDS
T10263
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03250
Viral life cycle - HIV-1
sati04623
Cytosolic DNA-sensing pathway
Brite
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
136368353 (SAMHD1)
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GFIT
Other DBs
NCBI-GeneID:
136368353
NCBI-ProteinID:
XP_066186594
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Position
16:complement(895493..923847)
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AA seq
634 aa
AA seq
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MASRARGAARGGDVTARRTLGPAAPARWRCGMGSPAGAPAKRARCDGPRGPGSDPRLWDT
ERLCQHLSRCGVGDPSLLRRFRENGVTGRMLLDLPACAPELVRVCCPAERVEVLACLTQL
QPQRMELMKVFNDPIHGHIELHPLLVQIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEH
SLGVGYLAGCLVRTLKERQPELDITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRP
DLKWKHETASVQMFEHLITSNNLEEVMKFYGLDLEEDMFFIKEQIGGPIDETACVNSWPY
RGRPKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIPNNFDYKRLLIFTRVCEVKNQK
HICTRDKEVGNLYEMFHTRNCLHRRAYQHKTGNIIEIMITEAFQKADKFFEIRGSGGKVY
RISTAMEDMEAYTKLTDCIYLEILHSSGPELEEAREILRKIERRELYKFLGETRPESKKE
IVKSNNLAESIANSKPEKDPPDVELKAENFIVDVISMDYGMKEQNPIDKVHFYCKADPSK
AVKISKEQVSKLLPIIFMEQVIRVYYKSQNPRIISAAKQYFVQWCMQNDFTKPQDGDVVA
PHLTPMKKTWNNMTDDEHRRASEPSCKQRLPFDE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggccagccgcgcccgaggggccgcgaggggcggtgacgtcactgcgcgccggaccctc
gggccggcggcgcctgcgcggtggcggtgcggcatggggagcccggcgggcgctcccgcc
aagcgcgcgcggtgcgacgggccccgcggccccggcagcgacccgcggctgtgggacacc
gagcggctctgccagcacctctcccgctgcggcgtaggcgatcccagcctgctgcgccgc
ttccgagagaacggggtcaccgggaggatgctgctggacctgccggcctgcgccccggag
ctcgtccgcgtctgctgtccagctgagcgagtggaagtgctggcgtgcctgacacaactg
caaccacagcgcatggagctgatgaaggtttttaatgatcctattcatgggcacattgaa
ttgcatcccctgcttgttcagatcatcgacacccctcaattccagcgcctccggtacatc
aagcagctgggtggcacatactttgtttttccaggtgcctctcacaaccgctttgagcac
tccctaggggttggctaccttgcaggatgtctggttcgtacgctgaaggagaggcagcca
gaactggatataacccagcgagacattctctgtgtagaaattgctgggctttgtcatgat
ttgggtcatgggccattttcacacatgtttgatggaagatttattccactcactcgtcca
gatttgaagtggaagcatgaaactgcttctgttcaaatgtttgagcatttgatcacttcc
aataaccttgaagaagtcatgaagttttatggtcttgatctggaggaagatatgtttttc
atcaaggaacaaataggagggcctatagatgaaactgcctgtgtgaattcgtggccctac
cgtggtcgaccaaaggagaaaagtttcctctatgagattgtagctaataaaaaaaatggc
attgacgttgacaagtgggattattttgcaagggattgccatcatcttggaatcccaaat
aattttgactataagcgattgcttatcttcactcgggtctgtgaagtgaaaaaccagaag
cacatctgtacccgtgacaaggaagttggaaatttgtacgagatgttccacacccggaat
tgtctgcaccggagagcataccagcataaaactggcaacatcattgaaataatgataaca
gaagcttttcaaaaagcagacaaattttttgaaataagaggctctggaggaaaagtgtat
cggatttctacagcaatggaggacatggaagcctacactaaactaactgattgtatctac
ctggaaattctgcactcaagtggtccagaactggaggaggcacgagaaattttgcgtaaa
atagaacgacgtgaattatacaagtttttaggggagactcgacctgaatcaaagaaggaa
attgtaaagagtaataatctggcagaaagcatcgctaattccaagccagagaaggaccct
ccagatgtggagctaaaggctgagaatttcatagttgatgttatcagcatggattatgga
atgaaggagcagaatccaattgataaggttcacttctattgcaaggctgatccttccaag
gcagtcaaaatcagtaaagaacaggtttcaaagcttttacccataatatttatggagcag
gttatccgggtttattacaaaagtcagaatccacgtatcatttcagctgcaaaacagtat
tttgttcagtggtgtatgcagaacgatttcaccaaaccacaggatggtgatgttgttgct
cctcatctaactccaatgaagaaaacctggaataatatgacagatgatgaacacaggaga
gcctcagaacccagctgcaaacaacggcttccttttgatgagtaa
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