Sylvia atricapilla (blackcap): 136368362
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Entry
136368362 CDS
T10263
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136368362 (RBM39)
Spliceosome [BR:
sati03041
]
Common components
Common spliceosomal components
General mRNP proteins
136368362 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
136368362
NCBI-ProteinID:
XP_066186611
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All DBs
Position
16:1446624..1477002
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaactgagcagtgccaatggccatgaggagcgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacagaaagaggagcagaagcaaggaacgcaaacggagccgagat
cgggaacggaaaaagagcagaagtcgggaaaggaaacggagcagaagcaaggaacgcaga
cgcagccgatctaggagcagagatcgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgtcgctccagaagcaaaagccctttcagaaaagacaaaagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtgttctgtatgcagttg
gctgcaagaattcgaccaagagacctggaagaatttttctctacagtagggaaggttcgt
gatgtgcgaatgatttcagatagaaattccagacgttcaaagggaattgcttatgttgaa
tttgttgatgttagttcagtgccccttgcaataggactgactggacagagagtcctgggt
gtacctatcattgtacaggcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggcagtgctggtcctatgaggctctatgtgggatcattacatttcaac
ataactgaagatatgcttcgaggaatctttgagccgtttggcaggattgaaagtattcag
ctcatgatggacagtgaaactggacgctcaaaaggatatggattcattacgttctcagac
tctgagtgtgccaaaaaggccctggaacaactcaatggatttgaactggctgggaggcca
atgaaagttggacatgtaactgagcgtactgatgcttccagtgctagctcatttttggat
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagctgatg
gcaagacttgcagaaggtactggtttgcagattcctccagctgcacagcaggctctgcag
atgagtggatctttggcctttggagctgtgacagatttacaaacgagattgtctcagcag
aatgaagttctggctgcagctgcttccgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggacacagaaattaaagac
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctacgttgacaaaaac
tcagctcagggcaatgtgtatgtcaaatgtccctccattgctgctgccatcgcagctgtc
aatgctttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacataccacagccttttcccagactctatgactgcaacccaactactggttcctgtt
cgacgatga
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