Sylvia atricapilla (blackcap): 136368397
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Entry
136368397 CDS
T10263
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136368397 (DHX35)
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136368397 (DHX35)
Spliceosome [BR:
sati03041
]
Complex C
Other components
Complex C specific factors
136368397 (DHX35)
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
UPF0203
Motif
Other DBs
NCBI-GeneID:
136368397
NCBI-ProteinID:
XP_066186675
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All DBs
Position
16:4272419..4301687
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AA seq
712 aa
AA seq
DB search
MAAPVGPVKFWKPGSEGPGVSVSEERQSPAESSAVTVIYNPYASLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
ADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEG
RTFPVDIFYLQSPVPDYIKSTVETTMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARA
LARSGMKKHLRVLPMYAGLPSPEQLKVFERVPHTVRKVIVATNIAETSITVHGISFVIDC
GFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRSRSGKCYRLYTEEDFEKLPKSTVP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFVIPPNQKNQAARQHRKFAV
EEGDHLTMLNVYEAFVKHSKSSQWCQDHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPSSVLYAEKPPRWVVYNEVIQ
TAKYYMRDVTAVESSWLLELAPHFYQQGTVRNRHKGQTHLSLKAKRAKVDDH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtggggccggtgaagttttggaagccgggctcagaaggtcctggtgtc
agtgtctcagaggagaggcagagccctgctgagagcagcgctgtgactgtcatctacaac
ccttatgcttccctctccattgagcagcaaaggcaaaagctgcctgtttttaagctaaga
aatcacatcctttacctagtggagaactaccagactctggtgattattggggaaacagga
tgtgggaaatcaacgcagattccacaatacctggcagaagctggctggacagccgaagga
agagtcgttggggtgacacagcctcgtcgggtcgctgctgtttcagttgcagggcgggtt
gctgacgaaagaggtgcagtgctgggacacgaggttggctattgtatccgctttgacgac
tgcacagacccacaggctacaagaattaagtttctaactgatggtatgctggtgagggag
atgatggctgatcctttattaacaagatacagtgtcctcatgctagatgaagctcatgaa
aggactctttatacagacattgccattggcttactaaaaaaggttcagaagaagcgtggg
gatcttcgcctgatcgtggcttcagccaccttggatgcagagaaattcagggatttcttt
aatcaaaacgataccggtgaccccagcaaagacaccagtgtgatccttactgttgagggg
aggacgtttccagtggacatcttttacctacagagccctgttcctgactacataaaatca
actgtggaaactacaatgaagattcaccagatggagaatgatggtgatatactggcattt
ttaactggccaggaggaagtggagactgttgtttccatgctcatagaacaggctcgggcc
ctcgctcgcagcgggatgaagaagcacctccgtgttctccccatgtatgctgggctgccc
tcccctgagcagctgaaagtgtttgagagagtccctcacactgtcaggaaggtgatcgtt
gccaccaacattgccgagacctccatcacggtgcacggcatctcgtttgtcatcgactgt
ggctttgtgaagctgcgggcctacaaccccaaaacagccatcgagtgcctggtggtggtg
ccggtgtccaaggcctctgccaaccagcgggcagggcgcgccggccgcagccgctccggg
aagtgctaccgcctctacacagaggaggactttgagaagctgcccaagtccacggtgccg
gagatgcagcgcagtaacctggcccctgtcatcctgcagctcaaggctctgggcattgac
aacgtgctcaggttccccttcctctcgccaccccctgcacagtcaatggtgcaagcttta
gagttgctgtatgctttaggaggtctggatatgcactgccgattaacagagcctcttggg
atgagaatagcagagtttcctttgaatcctatgtttgcaaagatgcttctggagtcggga
aattttggctgctcccaagagattttgacaattgctgccatgatgcagattcaaaacatc
tttgtgatccctccaaatcaaaaaaaccaggctgccaggcaacacagaaagtttgctgtg
gaggaaggtgatcatctgaccatgctgaatgtttatgaagcctttgtaaagcacagcaag
agctcccagtggtgccaggaccactttctgaactacaaagggcttgtgagagcttctgtt
gtaagagagcagctgaaaaaacttcttgtccgctttaaagtgccaaagaagtccagtgaa
ggtgatccagatccagttttgaggtgcatagtttctggattctttgctaatgcagctaaa
ttccactccacaggagcttacaggacaatccgtgatgaccatgagcttcacatccacccc
agctcagtgctgtatgcagagaaacctccacgctgggtagtgtacaatgaagtcatccag
actgctaaatactacatgagagatgtgacagctgttgaatcctcctggctcctggagctg
gcacctcacttttaccagcaaggaacggtacggaatcggcataaaggccaaacgcatctt
tccttgaaagcaaaaagggctaaagtagatgaccactga
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