Sylvia atricapilla (blackcap): 136368400
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Entry
136368400 CDS
T10263
Symbol
TOP1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sati03032
]
136368400 (TOP1)
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
136368400 (TOP1)
DNA replication proteins [BR:
sati03032
]
Eukaryotic type
DNA Topoisomerases
136368400 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
136368400
NCBI-ProteinID:
XP_066186679
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Position
16:5284588..5351914
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AA seq
766 aa
AA seq
DB search
MSGDQLHNDSQIEADFRANDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSS
EKKHKDKEKTKHKDGSSEKHKDKHKDKDKEKRKEEKMKSSSGDIKIKKEKENGFSSPPRI
KDEPDDDGFYASPKEDSKPLKRPREDDDADYKPKKIKTEDIKKAKKRKQEEEEDIKAKKV
KSKDKKVPEVDKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVK
FYYDGKVMKLSTKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTSEEKSTITNLSK
CDFTHMSQYFKAQSEARKQMSKEEKQKIKEENERLLKEYGYCVMDNHKERIANFKIEPPG
LFRGRGNHPKMGMLKRRIMPEDIIINCSKDSKIPAPPPGHKWKEVRHDNKVTWLVSWTEN
IQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVAL
YFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPELDGQEYVVEFDFLGKDSIRYYN
KVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSILNKHLQDLMEGLTAKVFRTYNASITLQ
QQLKELTNPDDNIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKEQLA
DARRELKSAKADAKVRRDEKSKKTVESKKKAVQRIEEQLMKLEVQATDREENKQIALGTS
KLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIXMAEEDYEF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggaccagctgcacaacgattcccagatcgaggcggatttccgagcgaacgat
tctcacaaacacaaagacaaacacaaagaccgagaacaccggcacaaagagcacaagaag
gacaaggaaaaagaccgggaaaagtccaagcacagtaatagtgagcacaaagattcctcg
gaaaagaaacacaaagacaaggagaaaaccaaacacaaagatggcagctcagagaaacac
aaagacaaacacaaagataaagacaaggagaagagaaaggaagagaagatgaagtcatct
tctggtgatataaaaataaagaaggaaaaggaaaatggcttctccagtccaccacgtatt
aaagatgaaccagatgatgatgggttttatgcatctcctaaagaggactccaaacccctg
aagagacctcgagaggatgatgatgctgactacaaacccaagaaaatcaaaacagaagac
atcaagaaagcaaagaaaaggaaacaagaggaagaagaggacatcaaagcaaagaaagtc
aagagtaaagataagaaagtccctgaagtggacaaaaaaaagaagccgaaaaaagaagag
gagcaaaaatggaaatggtgggaagaagagcgctaccctgaaggcattaaatggaagttc
ctagagcacaaaggccctgtatttgctccaccatatgaacctctgcctgaaaatgtcaag
ttttattatgatggtaaagtcatgaagctgagtaccaaagcagaagaagttgccacattc
tttgcaaaaatgcttgatcatgagtacactacaaaggagatcttcaggaaaaacttcttc
aaggactggagaaaggaaatgacctctgaagagaagagcactatcaccaacctcagcaag
tgtgacttcacccacatgagccagtatttcaaagctcagtcggaagctaggaaacagatg
tccaaggaggagaaacagaaaatcaaagaggagaacgagcggctattgaaggaatatggg
tactgtgtgatggacaaccacaaggagaggattgccaactttaagattgaacccccaggt
ctcttccgaggtcgtgggaaccatcccaagatgggaatgttgaagagacgcatcatgcct
gaagacatcatcattaactgcagcaaggattccaaaatccctgcccctccaccaggacac
aaatggaaggaggtccggcatgacaacaaggtgacctggttggtgtcatggactgagaac
atccaaggctctatcaaatacatcatgttgaaccctagctcaagaattaagggtgagaag
gactggcagaagtacgagacagctcggaggttgaagaagtgtgtagataaaatccggaat
cagtaccgagaagactggaaatccaaagagatgaaagtacggcagagggctgtggcactg
tacttcatcgataagcttgccctgagagctggtaatgaaaaagaagaaggagagacagct
gacaccgtgggctgctgctctctgagagtagagcacatcaagctgcatcctgagctggat
gggcaggaatacgtggttgagttcgacttcctcgggaaggactccatccgatactacaac
aaagtccctgtggagaagagggtatttaagaatcttcagctgttcatggagaacaagcag
cctgaggatgacctctttgaccgcctcaataccagtatcttaaataaacaccttcaagac
cttatggagggactgacagccaaggtattccgtacttacaatgcctccatcacgctacag
cagcagctcaaggagctcactaatcctgatgacaacatcccagcaaagatcctctcctac
aaccgtgccaacagagcggtggccatcctctgtaaccaccagagagctccgcccaaaacc
ttcgagaagtccatgatgaacctgcagagcaagattgatgccaagaaggagcaattagct
gatgccaggagggaactgaaaagcgccaaagctgatgccaaggtccggagggatgagaag
tctaaaaagacagtggagagcaagaagaaagccgtgcagaggatcgaggagcaactgatg
aagctggaggttcaggctacagatagggaggagaacaagcagattgctttgggcacctcc
aaactcaactatctggatcccaggatctctgttgcttggtgtaagaagtggggaattcct
atagagaagatatataacaaaacccaacgagagaaatttgcctgggctatcngcatggca
gaggaagactatgagttttaa
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