Sylvia atricapilla (blackcap): 136368402
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Entry
136368402 CDS
T10263
Symbol
RPN2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00510
N-Glycan biosynthesis
sati00513
Various types of N-glycan biosynthesis
sati01100
Metabolic pathways
sati04141
Protein processing in endoplasmic reticulum
Module
sati_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
136368402 (RPN2)
00513 Various types of N-glycan biosynthesis
136368402 (RPN2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136368402 (RPN2)
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
HSM3_N
DUF5859
Motif
Other DBs
NCBI-GeneID:
136368402
NCBI-ProteinID:
XP_066186682
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Position
16:5540767..5560221
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AA seq
670 aa
AA seq
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MARAGAGRGVGRKRRRGAGGGGIMAAPGPRLRPEAVLSFLLLLAGAQALVPSHRLAARDL
ARLRAVLERPFTDVRSAYYSIVGLSSLGVRVADEKAACKFIKSHVDSSSVESLFYAAQSI
QALSGCEVTISNETRELLLAAVSEDSSVTQIFHAVGALSGFGLPLASQEALSALTARLSK
EESVLATIQALETASYLSQQADLSSIVEEIEDLVARLDDLGGVYLQFEEGIETTALFVAA
AYKLSDHVGTEPAIKEDQVIQLVNAIFSKKNFETLSEAFSVARAAGSLSQNRFHLPVIVV
PDGAAAVSHHQPVLRLQVTNVMSQLLTQVSVKLDQAKSVSSKATVLQQLPFTLSGDFFEL
NFMSVKPASGYYDFSISVDGDKRFIANKVELKVKVSTEVGITNVDLSTVDKDQSIAPKTT
RVAYPAKAKGSFTADSHQNFALSFQLIDVNSGAELIPHQTFVRLHNQKTGQEVVFVAEPD
SKNVYKFELDTSERKTEFDSASGTYTLYLIIGDATLENPILWNVADVVITFPEEDAPSTV
QSKNLFVPKPEIQHLFREPEKRPPTVVSNTFTALVLSPLLLLLILWIKIGANISNFSFAP
STIVFHMGHAAMLGLMYVYWTQLNMFQTLKYLAILGGITFLAGNRMLAQKAVKRIAAEQS
SRLAKYRTLR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgccggggcggggcggggcgtggggcggaagcgacgccgtggcgcgggaggg
ggcggcatcatggcggcgccgggtccgaggctgcgtccggaggcggtgctcagcttcctg
cttctcctcgccggtgcccaggcccttgtccccagccatcgtctcgctgcccgagacctg
gcgcggctgcgggcggtgctggagcggcccttcaccgacgtgcggtctgcctactactcc
atcgtggggctcagcagcctcggggtgcgggtggcggacgaaaaggctgcatgcaagttc
atcaaatctcatgtggactccagcagcgttgaatccctcttttatgctgcccagtccatc
caggccctgtcaggctgtgaggtcaccatttcaaatgagaccagggagctgctgctggca
gctgtcagtgaggattcctcagtcacccagatcttccacgctgttggtgccctgagtggc
tttggccttcctttggcatcccaggaagccctgagtgctctcactgctcgtctcagcaag
gaggagagtgtgctggcaaccatccaggctttggagacggcctcttacctgtcccagcag
gcagatctgagtagcattgttgaggagattgaggatcttgttgctcgcttggatgacctg
ggtggagtttacctgcagtttgaagaaggaattgagactactgccctgtttgttgctgct
gcctataagctgtcagaccatgtggggacagagccagcaataaaggaggatcaagtgatc
cagctggtgaatgccatttttagcaagaagaactttgagacactctcagaggctttcagc
gttgcccgtgctgcaggttccttgtcccagaatcgcttccacttgcctgtcatcgttgtc
cctgatggggctgcagctgtgtctcatcatcagcctgtgctcaggctgcaagtgaccaat
gttatgtctcagctactgactcaagtttctgtaaagcttgaccaagccaagtctgtgtct
agcaaagccactgtccttcaacagctaccatttactctctctggagatttctttgagctg
aacttcatgagtgtgaaacctgctagtggatattatgatttctctatcagtgtagatgga
gataagcgatttattgctaacaaagtggagctgaaagtaaaagtttctacagaagtgggg
attactaatgtagatctttctaccgtggataaagatcagagcattgcaccaaaaacaacc
agggtagcttacccagccaaagccaagggctcgttcactgctgacagccatcagaacttt
gctttatccttccagctgatagatgtgaacagtggagctgaactcatccctcaccagact
tttgttcgacttcacaaccaaaagactggccaggaggtggtgtttgttgcagaaccagac
agcaagaatgtgtacaaatttgaactggatacctctgaaagaaagaccgaatttgactct
gcctctgggacctacactctctacctgatcattggagatgccactctggaaaatccaatc
ctttggaatgtggctgatgttgtgatcacattcccagaagaggatgcaccatccacagtc
cagtccaagaacctcttcgttcccaaacctgaaatccagcacctcttcagggagcctgag
aagaggcctcccacagtggtctccaacactttcaccgctctggttctctccccactgctt
ttgctgctcattttgtggatcaagataggtgccaacatctccaacttcagctttgctccc
agcaccattgttttccacatgggacatgctgcaatgttgggactcatgtatgtctactgg
actcagctcaacatgttccagactctgaagtacttggccattttgggtggcatcacattc
ctggcaggcaacaggatgctggctcagaaagctgtgaagaggatcgctgcagagcagagc
agtaggttggcaaagtatagaacgctgcggtaa
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