Sylvia atricapilla (blackcap): 136368639
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Entry
136368639 CDS
T10263
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136368639 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sati01009
]
136368639 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136368639 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
sati03029
]
136368639 (RB1CC1)
Protein phosphatases and associated proteins [BR:
sati01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136368639 (RB1CC1)
Membrane trafficking [BR:
sati04131
]
Autophagy
Autophagosome formation proteins
ULK complex
136368639 (RB1CC1)
Mitochondrial biogenesis [BR:
sati03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
136368639 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
HI_1622_C
Pallilysin
Motif
Other DBs
NCBI-GeneID:
136368639
NCBI-ProteinID:
XP_066187084
LinkDB
All DBs
Position
1:complement(112909197..112976364)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTQSYQKLLYKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEYGGAESEETEDGKSA
ELVLYPDVSKMNNKSMLTSFCKSVEHSALEGTDPENVKDDKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECHQTIIKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRTES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASLSVCVEKCRVIAQDSKIHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKALNDKHQNELQSLKSEYETKIKKLVEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENKEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENQHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLRKEIDKLNNKIQISSEEYQVGLSELRTLMTIEKDQ
CISELINRYEEESNLLRTELNKITLLHQKTAEAEKRLSERITELQSKLELEMNALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEEAVQTACKEFELQR
EAVEKGLLEKIQQLEMQVNRSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSAYLAAAPEACGACAADVPADTERLVGDFGVEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtattggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaagttgccaaaaagctttgctccttttgtgaaggtcttgta
catgatgagcatcttcaacatcaaggctgggctgccataatggccaacttagaagattgt
acacagtcttaccaaaagctgctttacaagtttgaaaatgtgtattcgagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaatatggaggagcagaaagtgaagaaactgaggacgggaaatctgct
gaattggtgctttatcctgatgtatctaaaatgaacaataaatcaatgttaacatcattt
tgcaagtcagttgaacattcagctctggaaggcacagatcctgaaaatgtaaaagatgat
aaggaatctggtcaaaatgctactgtccaggacaatgaaatgtcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttattagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggccgaatgtcaccaaactatcatcaaactagataatcagaat
atgaaggcaattaaaggtcttgaggatagactctatgcattagaccagatgatagcaagc
tgcagcagactggtgaacgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactaaagtggtgttgttttgtg
atgcttcatgctgaccaagatggagagaaactgcaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaggttgtcaggagaaaaatgttcataaaacactacagggagtgggctggt
gctttaataaaagatgggaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagagggcttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcg
ttgagtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagtcaagcatcgccacaatctgctaccaccccaaggacggaaagt
actacaggaaccgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagagttgtctccagacagcatt
gatgctcacacgtttgatttcgaaacaattgcccatccaaacttggagcaagctcttaag
caaggatcattagacttggattcattagcagagagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtgtctcctaatgtcattagtgacccacaa
agcccggaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaagttcttgtgtaaaggacgtttcagtagaaaatgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaagatacatttaagaggtatt
aaagaagatctttgccatttcagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaaactttcactt
gaaaaagcactaaatgataaacatcaaaatgaattgcagtctttgaaaagtgaatatgaa
actaaaattaaaaaactagtggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggtgacctgttaggccttgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattactt
gagttggaatgccaaatggagacacaaaattctgaaatcaaggaactgaggcagtcacgt
gagatagtacttgaagacttgaaaaaacttcatgttgaaaacaaagagaagctacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaacctg
caagccaggcatttacaggaatttgagaaggtcctagccgagcacaaggactgtttggat
aaattaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgaagtagtt
atgcaagagaaacaacaacaagtagaagagttacaactcaaggtttcagatctgtctgat
ttgaggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaaagtctcagattgacaag
gaaactgaaagcttaagaaaggagatagataaattaaacaataaaatacaaatcagcagt
gaagaatatcaagtgggcttatcagaactgaggactctgatgacaattgagaaagatcaa
tgtatttctgagctaataaatagatatgaagaagaatcaaatttgcttagaactgaatta
aataaaataactcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcga
ataacagaactgcaaagtaagttagagttggaaatgaatgccctagagaaggaaaaaaca
gaaaaattgtctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaag
gaagagaaagaactgttagtatctaaccaagaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggaagcagtacaaactgcttgtaaagagtttgaattacagagg
gaagctgttgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtgaatcgg
agtcctcctgcggaatcatctgctgaatcaaacttagtcgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagagcaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacttcacttactgcagagcagcagaccaactttaacactgta
ctggcaagagagaagatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgcttacttgaagagaagaagaagcttgaagaagaagttaataaactgagaagtagt
aatttttctccatcagcctacttggcagcagcgccagaagcttgtggagcctgtgcagct
gatgtgcccgctgacacagagagattggttggtgactttggggttgaagggagaatggac
tccacgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgttagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccaaagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggttctcattatcttggacgaaaggcatgac
aactacgtgttgtttactgttagtccaaccttgtatttcttgcactcggagtccctcgca
gcattggatctcaaaccaggtgagtgtgcatcaggtgcatctaggagaccttgggtgcta
ggaaaagtgatggagaaggaatattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
