Sylvia atricapilla (blackcap): 136368715
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Entry
136368715 CDS
T10263
Symbol
LHX5
Name
(RefSeq) LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136368715 (LHX5)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
136368715 (LHX5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
ARM_UBR_1_2_3
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
136368715
NCBI-ProteinID:
XP_066187178
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All DBs
Position
17:complement(4208121..4214426)
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AA seq
403 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSLKEGSLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRNEA
ADARWAPRRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFPHG
PPSQAQSPADSSYLQNSGPGSTPLGPLEPPLSGHHSSENQRYTDMISHPDTPSPEPGMTG
SLHPIPGEVFSGGPSPPFSMSSNSGYSGALSHPNQELSEAAVW
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgcgggctgcgagaggccgattttggaccggttcctgctgaacgtc
ttggacagggcatggcacatcaaatgcgtccagtgctgcgagtgcaagtgcaacctgacc
gagaaatgcttctccagggaagggaaactctactgcaaaaatgactttttcaggaggttt
ggtaccaaatgcgccggctgctcccaagggatctctcccagtgacctcgtccggaaagcc
cggaataaagtctttcacctgaactgtttcacctgcatggtctgcaacaagcagctctcc
acgggcgaggaactctatatcatcgacgaaaacaaatttgtttgcaaagaggattatttg
aactctcccagtttgaaggaaggcagcctcaactcagtgtcctcatgtacagacaggagt
ttgtccccggatctccaggaccccatgcaggacgacaccaaggaaacggacaactcgacc
tcctcggacaaggagaccaccaacaacgagaacgaggagcagaactcgggcaccaagcgg
aggggcccccgcaccaccattaaagccaagcagctggagaccctcaaagccgccttcgcc
gccacccccaaacccacccgccacatccgggagcagctggcccaggagaccggcctcaac
atgagagtcatccaggtgtggttccagaaccgtcggtccaaggagcggcggaatgaagca
gctgatgcgcgctgggcgccccgccggcacgcgttcttccgcagcccccgcaggatgcgg
cccctcggcggccgcctcgacgagtccgagatgctcggctccacgccctacacgtactac
ggagattaccaaggtgactactacgggccgggaggcaactatgactttttcccccacggg
ccgccctcccaagcccagtccccggccgactccagctaccttcagaactcaggacccggc
tccacacccctgggacccttggagccccccctaagcggacaccactcctcagaaaaccaa
aggtacacggatatgatctcgcaccccgacaccccgagccccgagccggggatgacgggc
tcgctgcaccccatcccgggggaggtcttcagcggggggcccagcccgcccttctccatg
tccagcaatagcggctacagcggggctctgtcgcaccccaaccaggagctcagcgaggcg
gcggtgtggtag
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