Sylvia atricapilla (blackcap): 136368775
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Entry
136368775 CDS
T10263
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
136368775 (THOC5)
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136368775 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136368775
NCBI-ProteinID:
XP_066187248
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Position
17:1572090..1584817
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AA seq
710 aa
AA seq
DB search
MSSESSKKRKPKVIRTDGVPAEGKRGKGDTDQETQTLLWRVSTKLEDPSGICMVPSNPPD
VRYYSEESEVDLRDPIKDYELYRETCQELQRLMAEIQELKSRGIKENASEIDERRVQSCV
HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSK
HEEIELVSLEEFYKEAPPEISRPAITLTEPHQQTLARLDWELEQRKRLAEKYKECLTSKE
KILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFV
QASAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQL
DDKRKEMLKRHPLSVTLDLKCKDENVLHLTFYYLMNLNVMTVKAKVTTAVEMTTAISAGD
LLSPDSLLNCLYPGDHGRKTPNPANQFQFDKVGILTLSDYVTELGHPYVWVQKLGGLHFP
KDQPQHTVAADNSLSASHMELTVKLLRSRLQSRLALHKQFASLEHGVVPVSSECQQLFPT
KIVSRLVKWTAIPYEDYAELPYTKDVIEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGY
STLPPVFSLCLNWKGERNSSNDDNIRAMESEVNVYYKELWGPKPGYQLLTNQLQRLCMVL
DVYLETEPHDPSVEGPKEFPQEKMCLRLVRGPLRLKPFKFNYPQGFFSHR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgagtccagcaagaagaggaagcccaaggtgatccgcacggatggggtccca
gccgagggcaagcggggcaagggcgacacggaccaggagacacaaacactcctctggaga
gtgagcacaaagctggaagatccctcagggatttgcatggtgccttcaaaccctcccgat
gtccggtactacagcgaggagagcgaggtggatctgcgtgaccccatcaaggactacgag
ctctacagggagacctgccaggagctccagaggctcatggcagagatccaggagctgaag
agccggggcatcaaggaaaatgcctcggagatcgacgagcggcgcgtgcagagctgtgtg
cacttcatgaccctgaagaagctgaaccgcctggctcacatccggctgaagaaaggcagg
gaccagacccacgaggcaaagcagaaggtcgatgcctatcacctgcagctccagaacctg
ctctacgaggtgatgcacctgcagaaagagatcaccaagtgcctggagttcaaatccaaa
catgaggagatcgagctggtgagcttggaggagttctacaaagaggccccccctgaaatc
agccgccctgccatcaccctgactgagccccaccagcagaccctggcccgcctggactgg
gagctggagcagcgcaagaggctggcagagaagtacaaggagtgcctgaccagcaaggag
aagatcctgaaggagatcgaggtgaagaaggaatatctgagcagcctccagcctcgactc
aacagcatcatgcaggcctccctgcctgtccaggagtacctgttcatgccctttgaccag
gctcacaagcagtatgagaccgcccggcacctcccgcctcctctctacgtcctcttcgtc
caagccagcgcctatggacaggcctgtgataagaagcttgtggtggccattgaagggagt
gtggaggaagccaaagccctttataagccacctgaggactcgcaggatgatgagagtgat
tccgacgcagaggaggagcaaaccacgaagcggcgcaggcccaccctgggtgtgcagctg
gacgacaaacgcaaggagatgctgaagcgacaccccttgtctgtcaccctcgacctgaag
tgtaaagatgagaacgtgcttcacctgaccttctactacctgatgaacctcaatgtcatg
acagtgaaagccaaggtgaccactgctgtggagatgaccacagccatcagtgctggggac
ctgctctccccagactccctcctcaactgcctctatcccggagaccatgggaggaaaaca
cccaacccagccaaccagttccagttcgataaagtgggcatcctgaccctgagtgactat
gtgacagagctgggacacccctacgtgtgggtgcagaagctgggcggcctgcatttcccc
aaggatcagcctcagcacacggtggctgctgacaattccctgagtgctagccacatggag
ctgacggtgaagctgctccggagccgcctgcagtcccgcctggccctgcacaagcagttt
gcatccctcgagcacggtgttgtgcccgtgtccagcgagtgccagcagctcttccccacc
aaaatcgtctcacgcctggtgaagtggactgccattccctatgaggattatgctgagctg
ccttacactaaggatgtgatagaggccggcttggctgaagacactcacctctactacatg
gccctgatagagaggggaacagccaagctccaggcagctgtggtgctgaatcctggttat
tccacgctgcctcctgtcttcagcctgtgcctgaactggaagggggagcggaacagcagc
aatgatgacaacattcgggccatggagagtgaagtcaatgtctattacaaggagctgtgg
gggcccaaacctggctaccagctcctcaccaaccagctgcagcgcctgtgcatggtgctg
gatgtgtacctggagacagagccccacgatcccagtgtggaggggcccaaggaattcccc
caggagaagatgtgtctgcgcctggtcaggggtcccctgcgcctgaaacccttcaagttc
aactacccccaggggttcttcagccatcgctga
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