Sylvia atricapilla (blackcap): 136368842
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Entry
136368842 CDS
T10263
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136368842 (HNF1A)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
136368842 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
KPBB_C
NanE
Motif
Other DBs
NCBI-GeneID:
136368842
NCBI-ProteinID:
XP_066187368
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Position
17:complement(3263382..3277778)
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AA seq
671 aa
AA seq
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MVSKLTHLQVELLEALLESGLTKETLIKALSDAEPYGLQGESQRAISALQPEKGEPCPDV
PNGIGDSRPSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAKMVK
SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQRKYSN
NCSPVSLSWRLLLCPAPPYSLLFSRKKLPCPCVLAEFTHAGQGILTDEPMGDDLPTKKGR
RNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAECIQRGVSPSQAQGLGSNLVT
EVRVYNWFANRRKEEAFRHKLAMDTFSGPQPTSAPPLTPHSSSSLQPPPALSPSKVHGVR
YNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGLEPSQNLLSTDTKLVSASGGTLPP
VSTLTALHSLEQSPHTLSQQTQNLIMASLPGVMAIGAGETPSLAPAFTNTGASTLVIGLA
STQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPLMQQVQSHINQSPFMATMAQIQNP
HALYGPKSEVTQYTHTGLLPQTMVITDTANLSALTNLTPTKQAFTPDSETHTESGMHTPV
SQAPTIHLQNQDTTIQHLQPGPRLTSSPAVSSSSLVLYQSSDSTNSHSQLLPSTHNVIET
FISTQMASSTQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgaagctgactcatctccaagtggagctgctggaagcgctgctggagtcgggg
ctgaccaaggagaccctgatcaaggcgctgagcgacgcggagccctacgggctgcagggc
gagagccagcgcgccatcagcgccctgcagcccgagaaaggggagccctgccccgacgtc
cccaacggcatcggcgactcccggccctccgaggatgagacctccgacgacggggaggaa
tttaccccgccaataatgaaggagctggaaaacttgagccctgaggaggctgctcaccag
aaggctgtggtggaaagactattacaagaggatccctggcgagtagcaaagatggtgaag
tcttacctccagcagcacaacatccctcagcgggaggtggtggacaccactggcctgaac
caatcccacctctcccaacacctcaacaagggcactcccatgaagacccaaaaacgggca
gccctgtacacctggtatgtccggaagcagcgagaggtggcccagcgtaagtacagcaac
aactgctctcctgtctcactttcatggaggcttctgctctgccctgctcctccttactcc
ttactgttttcaaggaaaaaactcccctgcccctgtgtgcttgcagagttcacacacgct
ggccagggtatcctgacagacgagcccatgggagatgacctgcccaccaagaagggaaga
agaaaccgctttaagtggggtcctgcctcccagcagatcctcttccaagcctatgagagg
cagaaaaaccccagcaaagaagagagggaggcactggtggaagagtgcaacagggcagag
tgtattcagagaggtgtttccccatctcaggcccagggactgggctcaaacctggtgaca
gaggtcagagtttacaactggtttgccaatcgcaggaaggaggaggctttccggcacaag
ctggccatggacaccttcagtggaccccagcccacctctgcccctcctctaaccccccac
agctcctcctccctccagccaccacctgctctctcacccagcaaagttcacggagtgagg
tacaaccagcagccagccagcgaggcagagtcctccagcagcaaccaccacgggaacagc
tccatggtgaccacccaaaccatcctgcatcaggtttctccccctggactggagcccagc
cagaacctgctgagcacagacactaagctggtatcagcctctggaggaaccctccctcct
gtcagcaccctgactgccctgcacagcctagagcaaagcccacacacgctgagccagcag
acccagaacctgatcatggcatccctgccgggggtgatggccatcggggccggcgagacg
ccgtcgctggcgcccgccttcaccaacaccggggcgtccacgctggtgatcggcctggcc
tcaacccagccccagagtgttcctgtaataaacagcatggggagcagcctcactaccctg
cagcctgtccagttctcccagcaactgcacccatcctaccagcagcccctcatgcagcaa
gtccagagccacatcaaccagagccccttcatggctaccatggcccagatacagaaccct
cacgctctctatggccccaaatctgaagtgactcaatacacacacacaggcctcttacca
caaaccatggtgataacagacacagccaacctcagcgccctgaccaacctgacaccaact
aaacaggcattcacacctgactcagagactcacaccgagtctgggatgcacacaccagtg
tcacaggcaccaacaattcacctacagaaccaagacacaaccatccagcaccttcagcca
ggcccacgcctcacctccagccctgcagtgtcctccagcagcctggtgctctaccaaagc
tctgactccaccaacagccacagccagctgctgccatccactcacaacgtcatcgagacc
ttcatctccacacagatggcatcttccacccagtaa
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