Sylvia atricapilla (blackcap): 136368905
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Entry
136368905 CDS
T10263
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04142
Lysosome
sati04144
Endocytosis
sati05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136368905 (CLTCL1)
04142 Lysosome
136368905 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
136368905 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136368905 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sati04147
]
136368905 (CLTCL1)
Membrane trafficking [BR:
sati04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
136368905 (CLTCL1)
Exosome [BR:
sati04147
]
Exosomal proteins
Proteins found in most exosomes
136368905 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
136368905
NCBI-ProteinID:
XP_066187469
LinkDB
All DBs
Position
17:complement(5504459..5539204)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGNYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMEHSLLQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aatccagcaaacattggattcagcaccctaacaatggaatctgacaagttcatctgcata
agggagaaagtaggagagcaggcacaggtagtgataattgacatgagtgatccaacaacc
cccatcagacgtccaatttctgcagaaagtgccatcatgaatccagcctctaaagtaata
gccctaaaagccgggaaaacacttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccacacaatggcagaggaagtgatcttctggaaatggatatctgtaaatacagttgcc
ttggtgacagagacagcagtgtaccactggagcatggagggagaatcacaaccccaaaag
atgtttgatagacatgctagtcttgcaggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactcggttgatagaaaagtctcccaacctatagaaggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttctgttttgctgtg
aggagtcctgcaggaggcaagctgcacataatcgaagtaggtcagccagcaactggaaat
cagccatttgttaagaaagccgttgatgtgtttttcccacctgaggcacaaacagacttt
cctgtggcaatgcagattggaattaagcatggtgttatttatctgatcacgaagtatgga
tatatccacatgtatgatttggagtctggagtgtgcatctacatgaaccgtattagtgct
gatactatctttgtcacagctcctcacgaacctacctcaggcattattggtgtgaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacatagtgaactatgctacgaat
gttctccagaatcctgacttgggactaagaatggctatacgtagtaacctagctggggca
gaggagttgtttgccagaaagtttaacacactgtttgctcaaggaaactatgcagatgct
gctaaagtagctgcgtctgcaccaaagggaattctacgtaccagtgatacgattaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttggaata
ttgcttgaccaggggcagctgaacaagtttgagtctctggagctctgccgcccagtcctg
cagcagggccgcaaacagctcctggagaagtggctgaaggaagacaagctggagtgctca
gaggagctgggagacttggtgaagacggctgacccaacccttgcactcagcgtctacctt
cgagcgaatgtgccaaacaaagtgattcagtgctttgctgaaactggccaattccagaaa
attgtgctgtatgctaagaaggttggctataccccagactggatcttcctactgagaagt
gtgatgagagtcagtccagaacaaggcctgcagttctctcagatgctggttcaggatgag
gagccactggctaatattaaccagattgtggatgtgttcatggagcacagtcttctgcag
cagtgcacatcctttttgttggatgccctgaaaaacaaccgccctgcagaaggccacctt
cagacccgtctcctggaaatgaatttgattcatgccccgcaggttgcagatgccattctg
ggaaaccaaatgtttacacactacgatcgtgctcatgttgcccagctgtgtgaaaaggca
ggcttgctccagagagctttggagcactacacggatctctatgatattaaacgtgcagtt
gttcatactcacctcttgaatcctgagtggcttgtgaacttttttggctctctctcagtt
gaagactctgtggagtgtttgcgtgctatgctgtcagccaacattaggcaaaacctacaa
ctctgtgtgcaagttgcttctaaataccatgaacagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactattctatttcttgggttccattgtaaac
tttagccaggatccagatgttcatttcaagtacatccaggcagcttgcaagactggtcag
ataaaggaagtggaaagaatctgccgtgaaagtaactgctataacccagaacgagtgaag
aactttttgaaggaggccaagctcacagatcagcttcctctgatcattgtctgtgatcgg
tttgactttgttcatgacctggtgctctatttgtatcgcaataatctgcagaagtatatt
gagatctatgtacagaaggtgaatcctagccgtataccagcagtggttggagggcttctt
gatgtagattgttctgaagatgtcatcaagaacttaatcatggtggtgagagggcagttc
tccacagatgagctggtggccgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgctttggcc
aaaatctacattgacagtaataataatccagagcgcttccttcgtgaaaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgct
tatgagagggggcagtgtgatctggaactcataaaggtgtgcaatgagaactccctgttt
aagagcgaggctcgctatctggtgcgcaggaaggaccctgagctctgggcaaatgtactg
gaagaaaacaacccgttcaggcggcagcttattgatcaggttgtccaaacagctttatca
gagacacaggatccagaggaagtttctgtaactgtgaaagctttcatgactgctgatctg
ccaaatgaactgattgaattattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaacctgcagaatctgctgatcctgactgccattaaggctgaccgcacccgagtg
atggagtacatcaatcggctggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctgtatgaggaagcctttgctatattcagaaaattcgatgtcaatacttca
gcaattcaggtgctgattgagcacattggcaacttagaccgtgcttatgaatttgcagag
aggtgtaatgaaccagcagtgtggagccagctggccagagcacagctccagaaggacttg
gtgaaggaagccattgactcctatataaaggcagatgatccatctgcctacatggaagtc
gttcaggcagctaataggaatgataattgggaggacctagtcaagttcttacagatggcc
aggaagaaggctagagagtcttatgtagagacagaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagtggccctaataatgcccatatacaacag
gttggtgatcgctgttatgaagaggggatgtatgaagcagcaaaacttctctataacaac
gtgtccaattttgctcgcctggcttctaccttggtgcaccttggggagtatcaggctgca
gtggacagtggccgcaaagccaatagcacaaggacttggaaggaggtctgcttcgcctgt
gtggatggaaaagaattccgcttggcacagatctgtggcttacacatagtcatccatgct
gatgaacttgaggagttgatcagttactatcaggatcgtggctactttgaagaactgatt
gcccttttggaagctgctttgggcctagagcgtgctcacatgggaatgtttactgaactt
gccatcttatactccaaattcaagcctcagaaaatgagggaacatctggagcttttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctctatgacaagtacgaggagtatgacaatgcaataattactatgatgaat
catcccactgatgcctggaaagaaggccagtttaaagacatcattgccaaggtggccaat
gtggagctgtactacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatctcctgcttgtattatctccacggctggatcacaccaggacagtcaattttttctca
aaggttaatcagctacttctagtaaagccttatctgcgttcagtccagaaccacaacaac
aaaggagttaacgaagctctaaacaaccttttaacagaagaggaagattttcagggtttg
agagcttccattgatgcctatgacaactttgataacataacattggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcgtacttgtacaagggtaacaaccgc
tggaaacagagtgtggagctctgcaagaaagaccgtctgtacaaggatgctatgcagtat
gctgcagagtccaaagatgcagagctggctgagaagctgctccaatggttcttggaagaa
ggcaagcaggagtgctttgcagcctgccttttcacatgctatgacttgctgcacccagat
gtagtccttgagttggcatggagacataacatcatggactttgcaatgccttatttcatc
caagtgatgagagaataccttaccaaagttgatggactgttctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatatggatacacagcaccaggattcacccagccgcctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
