Sylvia atricapilla (blackcap): 136368915
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Entry
136368915 CDS
T10263
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03440
Homologous recombination
sati03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136368915 (TOP3B)
03460 Fanconi anemia pathway
136368915 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sati03032
]
136368915 (TOP3B)
03400 DNA repair and recombination proteins [BR:
sati03400
]
136368915 (TOP3B)
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
136368915 (TOP3B)
DNA replication proteins [BR:
sati03032
]
Eukaryotic type
DNA Topoisomerases
136368915 (TOP3B)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
136368915 (TOP3B)
FA (Fanconi anemia) pathway
136368915 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
136368915
NCBI-ProteinID:
XP_066187485
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All DBs
Position
17:5948266..5959174
Genome browser
AA seq
862 aa
AA seq
DB search
MRTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFMGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNPEKESSLTLDWDRVRVFDREVAQMFLNITKMAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKALLSEGINRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCVGKVVTSPGFTEIMPWQSIPLEESLPHCEKGDLFPVGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSAETCELCEAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRR
PGGRLNPKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgtgctcatggtggcggagaagccgtccctggcgcagtccatcgccaagatc
ctctcgagagggaacatgtcctctcgcaagggactcaacggtgcgtgctctgtgcacgag
tacacggggtccttcatgggacagagtgcccacttcaagatgacatcggtgtgtggccac
gtcatgactctggatttcataggaaaatataacagctgggacaaagtggatccagcagaa
ctttttagcaaagctcccacagaaaagaaagaagctaatcccaaactgaccatggtgaag
tttttacaggtggaggggagaggctgtgattgtattgtcttgtggctggattgtgataag
gaaggagaaaacatctgttttgaagttcttgatgctgttcttcctgtcatgaacaagccc
cgtggcacggagaggacgatttacagagctaaattcagctccatcaccgacacagacatc
tgcaacgccatgaatcacttgggagagcccaatcgcaacgaggctctgtccgtggatgcc
cgccaggagctggatctgaggattggctgtgccttcaccaggttccagactaaatatttt
cagggtaaatacgggaatttagacagctccctcatctcctttgggccatgtcagacccca
acacttggattctgtgttgagaggcatgacaaaatccagtcatttaagcctgagacatac
tgggtgttgcaagctaaagtgaaccctgaaaaggaaagttctctcactttggattgggat
cgagtgagggtgtttgatcgtgaggttgctcaaatgttcctgaatataacaaagatggca
aaagaagcaaaggtagaatctgtgagcaaaaaagagaaggtgaagcagagaccactggct
ctgaacacagtagaaatgctccgagtggccagcgctgctttaggaatgggtccccaacat
gccatgcaaatagcagagcgtctttacactcagggttacatcagctaccctcgaacagaa
actacccattatccagaaaacttcgacctgaaaggatgtttgagacaacaagccaataat
ccttactgggcagaaactgtaaaagcattgctgtcagaaggcatcaatcgtccaaggaaa
ggccatgatgcaggagaccatcctcccatcaccccaatgagagctgcaacagaggcagaa
ttaggtggagacgggtggcgactgtatgagtacataactcggcacttcattgccactgtc
agtgctgactgcaagtacctgcaaaccaccatttccttcagtattggccctgaaagattt
acctgtgttgggaaggtggtaacctcaccaggattcacagaaattatgccatggcagagc
atcccattagaagagagccttccccactgtgagaaaggagatctttttccagttggtgaa
ataaagttgctggaaaagcaaaccagccctcctgattacctgacagaagcagagctgatc
actctgatggaaaagcatggcattggaactgatgccagtattccagtccacattaacaac
atttgccagcgaaactacgtcacagtggagagtggtcgaagactaaagcctacaaacctt
ggcattgttctggttcatggttattacaaaatagatgcagaattggttcttcctacaatc
cgcagtgctgtagagaagcaactcaacttaatagctctgggtaaagcaaattatcatcag
gtcctggagcacacccttgacattttcaaaaggaaatttcactattttgtggattctatt
gcaggtatggatgagctgatggaagtgtctttttcacccttggctgccacaggcaaaccc
ctttcccgctgtgggaaatgccatcgtttcatgaagtacattcaggccaagccgagtcgc
ctgcactgctctcactgtgatgacacctacagtctcccccagaacggtaccattaaactc
tacaaggagctgcgttgtcccctggatgactttgagctggtgctgtggtcatctgggtcc
agaggaaagagttatccactgtgtccatactgttacaaccatcctcccttcagggacatg
aaaaaaggaatgggctgtaatgagtgcacccaccccacgtgccagcactccctcagcatg
ctgggaatcgggcagtgcgtggagtgtgagaacggggttctggtgctggactcgacgtcg
gggcccaagtggaagatggcctgcaacaaatgcaacgtgatcgtgcacttcttcgagaac
gcccacaaggtgcgggtgtcggccgagacgtgcgagttgtgcgaggcggcgctggtggac
gtggattttaacaaagccaaatcgcccttgcctggcgatgagacgcagcattcgggctgc
gtgttctgtgaccccgtgtttcaggacctggtggagctgaaacacgcggccatgaggcac
cccatgcaccgggggggacaagggaagaggcaagggcggggaaggggcaaaggccggagg
cctggaggaagactcaacccaaagaaacccaaggacaaaatggcagctctggctgcttac
tttgtataa
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