Sylvia atricapilla (blackcap): 136368920
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Entry
136368920 CDS
T10263
Symbol
PPIL2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136368920 (PPIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136368920 (PPIL2)
03110 Chaperones and folding catalysts [BR:
sati03110
]
136368920 (PPIL2)
04121 Ubiquitin system [BR:
sati04121
]
136368920 (PPIL2)
Enzymes [BR:
sati01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
136368920 (PPIL2)
Spliceosome [BR:
sati03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
136368920 (PPIL2)
Complex C
U4/U6.U5 tri-SnRNP related factors
136368920 (PPIL2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
136368920 (PPIL2)
Chaperones and folding catalysts [BR:
sati03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
136368920 (PPIL2)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
U-box type E3
136368920 (PPIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
136368920
NCBI-ProteinID:
XP_066187490
LinkDB
All DBs
Position
17:complement(6097243..6165478)
Genome browser
AA seq
521 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTQFYGGKKADLPRTNFRRLSFDHCSLSLQPFEYPVCTPDGTV
FDILSIVPWIKKYGTNPITGEKLDAKSLIKLNFAKNSEGKYHCPVLFTVFTNNSHIVAIK
TTGNVFAYEAVEQLNIKPKSYKDLLTDEPFTRQDIVTLQDPTNLDKFNVSNFFHVKNNIK
VIDPDEEKAKSDPSYYLKNTNTETRETLLELYKEFKGDDILAATMKAPEKKKVDKLNAAH
YSTGAVSASFTSTAMVPETTHEAAAIEEDVVRYQYVKKKGYVRLHTNKGDLNLELHCDMT
PRTCENFIKLCKKNYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFKPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTVFGRVVGGFETLTAMENVESDPKTD
RPKEEIRIETTTVFVDPYEEADAQVAAEREKFQQEEEAAKIKAEVVPPKKEVQTPKTYRQ
GIGKYINMAAAKRSMEDDGPSTSTAVKKEKKSTGFGDFSSW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcggcagcaccagaaggataaaatgtacatcacgtgcgccgagtacacgcag
ttctacggcggcaagaaagcagaccttccacgaaccaattttaggcgtttatcatttgat
cactgcagtttgtctctgcagccatttgaatacccagtttgcacaccagatgggacagtc
tttgatattctgagcattgtaccttggataaagaaatatggaaccaatccaatcacggga
gaaaaactagatgccaaatcacttataaagctgaattttgctaaaaacagtgaaggcaag
taccactgtccagtgctgtttactgtatttacaaataactcccatattgtggccatcaag
actactggaaatgtctttgcctatgaggcagttgagcagctgaacataaaaccaaagagc
tacaaggatctcctgacagatgagcccttcactcggcaagacatcgtcacactgcaggat
ccaacaaacctggataagttcaatgtctcaaacttctttcatgttaagaacaacataaaa
gtaattgatccagatgaagaaaaagcaaaatcagatccatcttactatttgaagaataca
aatacagagacccgagagactttactggagctttataaggaattcaaaggcgatgatatt
ttagcggctactatgaaggctcctgaaaagaagaaagtggataagctgaatgcagctcac
tattccactggagctgtaagtgcatccttcacctccactgcaatggtgcctgaaactacc
cacgaagcagctgctattgaagaagatgttgtgagataccagtatgtgaagaagaaggga
tatgtgcgacttcacactaataaaggagacctaaacttggagctgcactgtgacatgaca
ccccgaacatgtgaaaactttatcaaattgtgcaagaagaactattacgatggaacaatt
tttcaccgatcaatccggaattttgtgatccaaggaggtgatccgactggaacaggaaca
gggggagaatcttactggggaaaacctttcaaagatgaattcaagcccaatttgtcccac
acgggacgtggtgttcttagtatggcaaattcgggacccaacacaaacaaatcacagttc
ttcatcacgttccgctcttgtgcgtatctggacaagaagcacacagtttttggaagggtg
gttggtggctttgaaaccctgactgctatggagaatgtggaaagtgacccaaaaacagac
cgtcccaaggaggaaataagaattgagacaacaactgtttttgttgatccctatgaagag
gcagatgcacaggtcgctgctgaaagagagaagttccagcaggaagaagaagcagccaaa
ataaaggctgaagtggttccaccaaaaaaagaggttcagactcctaaaacttacaggcag
gggattggaaaatacatcaacatggctgcagcgaagcgcagcatggaggatgatgggccc
tcaaccagcacagctgtgaagaaagagaagaagagcacaggcttcggcgacttcagctcc
tggtag
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