Sylvia atricapilla (blackcap): 136368957
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Entry
136368957 CDS
T10263
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sati03016
]
136368957 (PUS1)
Enzymes [BR:
sati01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
136368957 (PUS1)
Transfer RNA biogenesis [BR:
sati03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
136368957 (PUS1)
Prokaryotic type
136368957 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
136368957
NCBI-ProteinID:
XP_066187577
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All DBs
Position
17:complement(8433811..8439233)
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AA seq
533 aa
AA seq
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MLRWGLRVVSCGFSAPGSAACAGPWRRQRSVGTAGPCPAPLRGRVRPGGPMATRPAGLPS
RPAGCPGSAGPACLLQGMVTRPSGEQGCSPFLPWTCSCALLPPRGMELSLSARVSCYSCS
SPLRLFPLQVLTMAEDLIAAVASQTKRLSSSSEVVQRLEENGHQNKRLKSDADEEDAEDQ
NKKLPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPENHGEDMKKM
SFQRCARTDKGVSAAGQIVSLKVRLIDDILEKINNHLPSHIRILGLKRVTGGFNSKNKCD
ARTYSYMLPTFAFAHKDHDVQEELYRLDRETLERVNKLLACYKGTHNFHNFTSQKGPRDP
SAKRYIMEMYCGEPFVRENVEFAVIQVKGQSFMMHQIRKMIGLVIAIVKGYAAESIMERS
WGEEKVDVPKAPGLGLVLEKVHFEKYNRRFGNDGLHEPLEWTEEEEKIAVFKEQYIYPTI
INTEREEKSMANWLNTLPIHDFNSSAIEMQTNNKDSKKSSDLEGSDGCGDDSD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtggggactccgggttgtcagctgtggcttctccgctccgggaagcgcggcg
tgcgccgggccgtggcggcggcagcgcagcgtgggtaccgctgggccctgccctgccccg
ctccggggacgggtcaggccgggcgggcccatggccactcgccctgccggccttcccagc
cggcccgccgggtgtccaggcagcgcgggccctgcttgcctcctgcagggaatggtgaca
cggcctagcggggaacaggggtgctcgcccttcctgccttggacctgttcgtgtgccctt
ctgccgccccgggggatggagctgtcgctttctgcccgagtttcgtgctattcatgctcg
tcccctctgcggttgtttcccctgcaggttcttacaatggctgaggatttgatagcagcg
gttgctagccagacaaagagactcagcagtagcagcgaggtggttcaaaggctggaagaa
aacgggcatcagaacaaaaggttgaagagtgatgcggatgaggaagatgcagaggatcag
aataagaagttacccaaaaggaagattgtgctgttgatggcatattcagggaaaggctac
catggcatgcaaagaaacgtgggatcttcacagttcaagacaattgaagatgacttagtc
tctgcccttgttcagtcaggatgcatcccagaaaaccacggggaagacatgaagaagatg
tctttccagaggtgtgctcgaacagataagggtgtgtctgcagctggacagattgtgtca
ctgaaggtcaggctaatagatgacatcttagaaaagatcaataatcatcttccttctcac
atcagaattctgggcctgaagagagtcactggaggattcaactccaagaacaaatgtgat
gccaggacctactcttacatgctgccaacgtttgcctttgcccataaggaccacgatgtg
caggaagagctttatagactggacagagagacccttgagagggtcaataaactgctggcc
tgctacaaagggacacacaacttccacaacttcacgtcacagaagggccccagggacccc
agtgccaagaggtacatcatggagatgtactgtggagagcccttcgtcagggaaaatgtg
gaatttgcagtgatccaagtgaaaggccagagtttcatgatgcaccagatcaggaagatg
attgggctggtgatagccatcgtgaaaggttatgctgctgagtccatcatggaacgcagc
tggggagaggagaaggtggacgtccccaaagccccggggcttgggctggttttggagaaa
gtgcactttgaaaaatacaacaggcgttttgggaacgatgggctgcatgagccgctggaa
tggacagaggaggaggagaagattgctgttttcaaagagcagtacatctatcctaccatt
atcaacacggagagggaggagaaatccatggcaaactggctaaacaccctccccattcat
gacttcaactcctctgctattgagatgcaaactaacaacaaagattcaaagaagagcagc
gatctcgaaggcagcgacggttgtggcgatgattccgactga
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