Sylvia atricapilla (blackcap): 136368968
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Entry
136368968 CDS
T10263
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
sati Sylvia atricapilla (blackcap)
Brite
Cilium and associated proteins [BR:
sati03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
136368968 (TTC28)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136368968
NCBI-ProteinID:
XP_066187602
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Position
17:8702034..8810456
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AA seq
2419 aa
AA seq
DB search
MLSKAEFVEKVRQSNQACHEGDFHTAIVLYNEALGVDPQNCILYSNRSAAYMKIHQYDKA
LDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAM
KSPMRESLEPTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLK
LRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKSLGDQTGECRAHGNLGSAFFSKGNYR
EALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDEL
SEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFD
KAMSYHNYVLELAQELAEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDRA
AEGRASSNLGIIHQMKGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMYD
QAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQ
SEARALSNLGNFHCTRGEFVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYE
EAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALMDFNKAEECQKYLLSLAQSLNNSQ
AKFRALGNLGDIFVCKKDVHGAIKFYEQQLSLAHHVKDRRLEANAYAALGSAYRMVQKCD
KALGYHTQELEVYQELGDMSGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPS
IEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALG
DFEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHELG
EAFNKAQAYGELGSLHSQLGNYEQAISCLERQLNISREMKDRALESDAACGLGGVYQQMG
EYETALQYHQLDLQIAEETNNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMN
DLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASG
NLEESQHQLYRASALFETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVTLGHHDEALAV
AERGRTRAFADLLVERQTGQQDSDPYSPVTLDQVLETVNGQRGLVLYYSLAAGYLYSWLL
APGAGILKFHEYYLGDSLTENAGDFHEANSVALQTLTNSALEQHISSVREALGVDSYYTR
ACASSETESEAGDIMDQQFEEMNNKLNSMTDPTGFLRMVSRNNLLNRSCQSMTSLFSSTM
SPAKDGTSSLPRRQTSFSKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLILVLEGELYL
IPFALLKGSSSNEYLYERFSLIAVPSIQSLNPSSKSHVRKNTPAYSSSTSMAAVIGNPKL
PSAVMDRWLWGPMPSAEEEAYMVSELLGCQPLVGSSSTKERVMSALTQAECVHFATHVSW
KLAALVLTPNTDSNPASSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADV
LDLRLPVKLVVLGSYQESNSKVTSDGVIGLTRAFLAAGAQCVLVSLWPIPVAASKMFVHA
FYSSLLNGMKASAALGEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALTEI
LQHPERARDALRVLLHLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFR
LDPPASGLPAAVFFPTSDPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLINR
LHQVLVQLQAGEKEQDFPSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTG
KQATRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQYQNPPFSPT
CPDSIASDAISVYSLSSIASSMSFVSKPENTLDGAGHRGRQDYERPKNIYPHRSAAQSQL
SPQATAASKDEEEYEGFSIISNEPLASYQENIKPRFSPDHKQPKTSQNGGIKVSINSKGS
ISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSNPKLDPQEL
AQKILEETQSHLIAVERLQRSSSQLSKSNSSEDGAASPAGVSAFRSSETSAFSRPLSSSH
RNQSSPLAIKPKPPTRSSSLQKVSSGYNSPTTSEMSNREGTGQYSGQPSPGCDSHGSLTE
QPPFKLKYPSSPYSAHISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADAPDI
DKLKLAAIDEKVQAIHNLKMFWQSTPHHSTGPIKILRGAPGTMTSKKDVLSLLNLSPRHS
KEESAEKLELKDLSLGQHLAASPQKIPPNGHRHPETTNAMTSAHSSPGNTLGAVRPLRLP
AGNGYKFLSPGRFFPSSKC
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcaaagctgaatttgtggagaaggttcggcagagcaaccaggcgtgccatgag
ggtgacttccacacggccatcgtgctgtacaacgaggccctgggcgtggacccccagaac
tgcatcctctacagcaaccgctccgcagcctacatgaaaatccaccagtatgacaaggcc
ttggatgatgccatcaaagcacgcctcctgaatcccaaatggcccaaggcatacttccgt
cagggcgtggccctgcagtacctgggacgccacgcggatgcgctggccgccttcgcctcg
gggctggcgcaggatcccaagagcctccagctcctggtcggcatggtggaggccgccatg
aagtcacccatgagagagtccctggagcccacctaccaacaactgcagaagatgaagctg
gacaagagcccctttgtggtggtgtctgtgattggccaggagctcctgactgcaggccac
cacggggcctctgtggtggtgctggaggctgccctgaagattggcacgtgcagcctgaag
ctgcggggatcggtgttctctgcactgagcagcgcgtactggtcgctcgggaacacggag
aaaagcactggatacatgcagcaggacttggacgtggccaagagtttaggtgaccagaca
ggagaatgccgagctcatggaaatctgggctctgcattcttctccaaaggaaattaccgg
gaagcccttactaaccacagacatcagctggtgcttgccatgaagctcaaggacagagag
gcagcatcctcagcactgagcagtctgggccacgtgtacacagccatcggggactacccc
aacgcactggccagccacaagcagtgtgtcctcctggccaagcagtccaaggatgagctc
tcggaggcgcgggagctgggcaacatgggggcagtgtacattgccatgggggattttgag
aacgcagtgcagtgccatgagcagcatctgaagatcgccaaggagctggggaacaagcgg
gaggaggctcgagcctacagcaacctgggcagtgcttaccactaccgcaggaacttcgac
aaagccatgtcctaccacaactatgtgctggagttggcccaggagctggctgagaaggcc
attgagatgcgagcctacgctggcctgggccatgcagctagatgtatgcaagacctggag
agggctaagcagtaccatgaagagcagttgcacattgctgagagcctgcaggaccgagct
gctgaaggcagagcctcctccaatctaggaatcatccaccagatgaagggcgactacgac
acggcgctgcggctgcacaagacgcacctgtccatagcgcaggagctgagcgactacgcg
gcccagggccgggcctatggcaacatgggcaacgcttacaatgccctgggcatgtacgac
caggctgtcaagtaccatcggcaggagctgcagatctccatggaggtcaacgaccgtgct
tctcaggcctccacacacgggaacttggcagttgcttaccaggcgctgggtgcccacgac
cgcgctctgcagcactaccaaaaccatctcaacattgcccgggagctgcgggacatccag
agcgaagcgagggccctcagcaacttgggcaacttccactgcacacgaggagagtttgtg
caggcggccccgtactacgagcagtacctgcgcttgtccccagagctgcaggacatggaa
ggcgaggggaaagtttgccacaacctcggctatgcccattattgcctcgggaactatgaa
gaagctgttaagtactacgagcaggatcttgccttggcaaaggatcttcatgacaagctg
agccaagccaaagcctattgcaacctgggcttggccttcaaagccttgatggacttcaac
aaagcagaggagtgtcaaaagtacctgttgtccctggcacagtctctgaacaattcccag
gccaaattccgagctctggggaacttgggggatatttttgtctgtaaaaaagatgtacat
ggtgcaataaaattttatgagcagcagttgagcttagcccatcatgttaaagacaggaga
ctggaagccaatgcctatgcagccctgggctctgcatacaggatggtgcagaagtgtgac
aaggctttaggttaccacacgcaggaactggaggtgtaccaagagctgggggatatgtcg
ggtgaatgcagagcacacggtcaccttgctgcagtgtatatgtcacttgggaagtacacc
atggccttcaagtgctacgaagaacagctggagctggggcagaagttgaaggaccccagc
atcgaagcccaggtctacggtaacatgggcattaccaagatgaacatgaatgtcatggag
gaagcgattggctactttgagcagcagctggccatgctgcagcagctcagtgggaatgaa
tccgtattagatcggggccgagcctatgggaacctgggagattgttatgaggctctggga
gattttgaggaagctataaaatattatgaacagtacctgtctgtggctcaaagcttgaac
cgtatgcaagatcaggcaaaggcctaccgaggcttgggcagtgggcacagggctatggga
agtttacaacaggctctggtgtgctttgagaagaggcttgtagtagcacacgagctgggg
gaagcgtttaacaaagcccaggcttacggggagctgggaagcctgcacagccagctgggc
aactacgagcaggctatctcatgcctggagcggcagctgaacatctcccgggagatgaag
gaccgggcgctggagagcgacgctgcctgcgggctgggcggggtgtaccagcagatgggc
gagtacgagaccgccctgcagtaccaccagctggacctgcagatcgccgaggagaccaac
aacccggcgggccagggccgggcctacggcaacctgggcctcacctacgagtccttgggc
acctacgagagggccgtggtttatcaggagcagcacctcagcattgccgcgcaaatgaac
gacctcgtggccaaaaccgtgtcgtacagcagcctggggaggactcatcatgctttgcag
aactactctcaggctgtgatgtacctgcaggaaggactgaggctggcagagcagctggga
cgcagagaagatgaagcaaaaatccgtcatggccttggcctctccctctgggccagtggg
aacctggaggagtcccagcaccagctgtaccgggcctctgcgctgtttgaaaccatccgc
cacgaggtgcagctgagcacggattacaagctgtcactcttcgacctgcagacatcctcc
tatcaggccctgcagcgagttcttgtcactctgggtcaccatgatgaggcactggcagta
gcagagagaggacgaacgagggcttttgctgacctgctcgtggaacgtcagactgggcag
caggactcagatccctattctcctgtgaccctggaccaggtcctggagactgtgaatggc
cagaggggacttgttctctactactcactggctgcaggttatctgtacagctggctgctg
gctcctggagcaggaattctgaaattccatgagtattatctgggtgacagcctgacagaa
aatgctggggacttccatgaagccaacagcgtggccctgcagacactgacaaactcagcc
ctggagcagcacatctccagcgtgagggaggctctgggagtggattcctactacacgaga
gcctgtgctagcagtgagacagagagtgaagctggggatatcatggaccagcagtttgag
gagatgaataacaagctgaactcaatgactgatccaactggcttcctgaggatggtcagc
aggaacaacctattgaacaggagctgtcagagcatgaccagcctgttcagcagtaccatg
tctcctgctaaggatggaacatcatcactgccaaggaggcagacttctttcagcaaaccc
ccactccgtgctctctacgacttactgataggacccatggaaggaggtttgatgcattcc
agtgggcctgttggccgccaccgccagctgatcctggttctggagggagaactgtacctc
attccttttgctctcctgaagggcagttcctccaacgagtacctgtacgagcgcttcagc
ctcattgcagtgccctccatccagtcactgaaccccagctccaagtcccatgtgaggaag
aatactcctgcttactccagttctacctcaatggcagctgtgataggaaatcccaagctc
ccttcagcagttatggacaggtggctgtggggacctatgccctctgcagaagaggaagca
tatatggtatctgagttacttggctgccagcccttagtcggcagctcatcaacaaaagag
agagtcatgagtgccctcactcaggcagaatgtgtccactttgcaacccacgtctcctgg
aaactggctgctttggtcctgacacccaacactgacagcaacccagccagcagcaagagt
tcttttgggaacccctacacaatcccagaatctcttaggatgcaggatgatgccagtgat
gtggagagcatctcggactgccctcctctccaggagttcctgcttacagcggctgatgtg
ctggatctgcgtcttcctgtcaagctggtggttctaggctcctaccaagagtccaacagc
aaagtcacttctgatggagtcattggcttgacaagagccttcctggctgctggggctcag
tgtgtccttgtgtcactctggcccattcctgtggctgcttccaaaatgtttgtgcacgcc
ttctattcctctctcttaaacgggatgaaagccagcgcagcccttggagaagcgatgaaa
accgtgcagagcagcaagcagttctcccatccagccaactgggcaggtttcatgcttatt
gggagtgatatgaagctgaacagcccttcttcactggtaggacaggccctgactgagatc
ctgcagcaccctgaaagggcccgggatgctctgcgtgtcctcctccatctggtggagaaa
tcattgcagcgaatccaaaacgggcagcacaactccatgtacacctcccagcagagtgtg
gagaataaagttggtggcatcccaggctggcaggcactcctcacagcagtgggatttcgg
ttggaccctccagccagtggcctcccagcagctgtattcttcccaacctcggaccctggg
gacaggctgcagcagtgcagcaccaccatccagtccctcctaggtttgcctaaccctgca
cttcaggcactttgtaaacttatcacagcttcagaaacaggagagcagcttatcaacagg
ctgcatcaagtcctggttcagcttcaggcaggcgagaaggagcaagatttcccctctgca
ccaatccaggtctccatcagtgtccagctctggaggctgcctggctgccatgagtttctg
gcagctctaggttttgacctttgtgaagttggccaagaggaggtcattctgaaaactggg
aaacaagctaccaggaggaccatgcactttgctctacaatccttgctggcactttttgat
tctacagagctgcccaagcgccttagtctggacagttcctcatcactggagtcactggct
tctgctcagtctgtttccaaccctgtaccccagtatcagaaccctcccttctctcctacc
tgtccagacagcattgcctcagatgccatttctgtgtacagcctgagctccattgcttct
tccatgagctttgtttccaagccagagaacacgctggatggggcaggacacagaggacgg
caggattatgagaggcccaagaatatctatccacacagatctgcagctcagagccagctg
tcaccacaagccactgcagccagcaaagatgaggaagagtatgaaggtttctctataatc
agcaatgagcctttggccagttaccaagaaaacataaaaccaagattttcccctgatcac
aaacagcccaaaactagtcagaatggaggtattaaagtgtccatcaactccaaagggagc
ataagtactccaaattctcctgttaaaatgactctcatccccagcccaaattcacctttc
caaaaagttgggaaacttgcaagttctgacactggggaatctgaccagtccagcactgag
accgacagcaccgtcaaatcccaggaggacagtaatccaaagcttgatccgcaagagttg
gcccagaaaattctggaggaaactcagagtcacctcattgctgttgaacgtcttcagaga
agcagcagccagctgagcaagagcaacagctccgaggacggggccgccagcccggccggc
gtgtccgccttccgctcctcggagaccagcgccttcagccgcccgctcagctccagccac
aggaaccagtcctcacctcttgcaattaaaccaaagcctccaacgaggagttcatccctt
cagaaggtgagctctggctacaacagccccacgacgtcggagatgtcaaacagagaaggc
acaggccagtacagtgggcagccgtctccaggttgtgattcacatgggtctctaactgag
cagcctccctttaaactcaagtaccccagctccccttatagtgctcacatttctaaatca
cccagaaatatctctcctagctcgggccatcagtctcctggtggcagcactccatctcct
gctctttcttattcctctgctggttctgctcgctcaagcccagctgatgccccagacata
gacaaattaaaattggctgccatcgatgaaaaagtgcaagcaattcacaacttaaagatg
ttctggcaaagcactccccaccactccactggcccaataaagattctccgaggagctcct
ggaacaatgacttcgaagaaagatgtcctcagcttgctcaatttatcaccacgacacagc
aaagaagaaagtgcagagaagctggaactgaaggacctgtctcttgggcaacaccttgct
gcttcaccacagaagatccctccaaatggacacagacaccctgaaaccacaaatgccatg
acatcagctcattcctctcctggcaacactctgggagccgtgcgtcccctgaggctgcca
gctgggaatgggtacaaatttttgtcaccgggaagatttttcccttcctccaaatgttga
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