Sylvia atricapilla (blackcap): 136369085
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Entry
136369085 CDS
T10263
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136369085 (SBNO1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
136369085 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
136369085
NCBI-ProteinID:
XP_066187830
LinkDB
All DBs
Position
17:complement(11752296..11783542)
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AA seq
1391 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDSPDVVLANPAPTPAVQQSVPLSALELGLETEAA
AAVKQEPETVSTPALLNVRQPPSTTTFVLNQINQLPTLGTTIVVTKTTPVTTSRQTITVA
KIIQTSTTTRPSVAAPAVRNALTTAPSKDQIQLKDLLKNNSLNELMKLKPPPNIAQPVAT
AATDLSNGAVKKEASTKEVARIWINDIKMRSFSPTVKVPAVKEEEEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQTSISEETIDSGWLSALQLEAITYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAER
DLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGV
TFKIDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVF
QSLIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKIKKRKGEEISREAKKARK
TGGLAGSSSDESESESDASDNEESDNESSKFLSSGDDDDFNPFRDESSEDDEDDPWLIRK
EHKKNKEKKKKKSIDPDSIQSALLASGLGSKRPSCFTSTVGTTTSSTNTSANSNTNSSFV
TSQDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDD
GSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVH
MTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHG
DRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDFPGDFFKDVRQGLIGV
GLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLNAVIQNAKKNGRY
DMGILDLGSGDEKVRKADVKKFLTPGYSTSGHVELYTISVERGMSWDEATKIWAEQTGPD
DGFYLSLQIRNNKKTAILVKEVNPKKKLFLIYRPNTGKQLKLETCADLKKKYKKVPSEDA
LPHWLEQYNSSADTCTHAYWRGNCKKAGLGLVCEVGLRCRTYYVLCGSVLSVWTKVEGVL
ASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQQQIWQQH
HPQSITNLNNA
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccaggacaagatctgttgcttgctgctttgagtgagagtggaatcagtccc
aatgatctctttgatattgactctccagatgtggttcttgcaaatccagcaccaactcca
gctgttcagcagtcagtaccacttagtgctttagaactgggcctggagactgaggctgca
gctgctgtgaaacaggaaccagagactgtgtctactccagccttattaaatgttcggcaa
ccaccatccaccacaacctttgtgctgaatcaaatcaatcagcttccaaccctggggacg
acaatagtggtgacaaagacgacgcctgtcaccacctccaggcagaccatcactgtagca
aagatcatccagaccagcacaaccactcggccctcggtggcagcaccagcagttcgcaat
gccttgaccactgcaccttccaaggaccagattcagctgaaagatctgctcaagaacaat
agtcttaatgaactcatgaaattgaagccacctcctaatattgcccaacccgtggccaca
gcagccactgacctaagcaatggtgcagtgaagaaggaggcttccacaaaagaggtggca
agaatatggataaatgacatcaaaatgagaagtttttcacctactgtgaaagtgccagca
gtaaaagaggaggaggaacctgaggaagaagatgaagaagaaatgggccatgcagagacc
tatgctgaatatatgccaataaaattaaaaattggtctgcgtcatcctgacccagtggtg
gaaaccagctcattatccagcgtgactcctcctgatgtgtggtaccagacatcaatatca
gaggaaacaattgacagtggctggttgtcagctttgcagctcgaagcaatcacttatgca
gcccagcaacatgaaacattcctgcccaatggagacagagctggattcttgataggtgat
ggtgctggtgtaggaaaaggaaggaccatagctggaataatctatgaaaattacttgtta
ggcagaaaaagagcagtctggtttagcgtgtcaaacgacctgaaatacgacgctgaaaga
gatttgagagatattggagcaaaaaacatattggtgcactcattaaacaagttcaagtat
gggaagatttcttccaaacataatggaagtgtgaagaaaggtgtcatctttgctacttat
tcttctctcattggagaaagtcagtctggtgggaaatacaaaaccagattaaagcagctt
cttcactggtgtggtgaagactttgatggagttatcgtatttgacgagtgtcataaagcg
aagaatctgtgtcctgttggttcatcaaaaccaacaaaaacaggtctggctgtattggaa
cttcaaaataaacttccaaaagccagggttgtttatgccagtgccacaggtgcatctgag
ccaagaaacatggcatatatgaaccgccttggaatatggggtgaaggaactccatttagg
gaattcagtgattttattcaggctgttgaaagaagaggtgttggtgccatggaaatagtt
gctatggatatgaaactgagaggaatgtacatagccagacagttgagtttttcaggtgta
actttcaaaatcgacgaagttctgctctcacaggagtatgttaaaatgtacaataaatct
gtgaagctgtgggtgagtgctcgagagaggtttcagcaggcggccgatctcatcgacgca
gagcagcgcatgaaaaaatccatgtggggtcagttctggtcagctcaccagaggtttttc
aagtacctttgcatagcctctaaggtgaagagggtggtgcagctggctcgggaagaaatc
aagaacggcaaatgcgtcgtcattggcctgcagtcgacaggagaagcaagaaccttggaa
gctttggaggaaggtggtggggagctgaatgactttgtttctacagcaaaaggagtattc
cagtctcttattgaaaagcactttccagctcctgacaggaagaagctgtttagcttgttg
ggaatcgacctgactgctcaaagtaataacaattcaccccgagacagcccttgcaaggag
aacaaaataaagaaacgaaaaggtgaagaaatcagcagagaagccaaaaaagcccgtaaa
acaggtggccttgcaggcagcagctctgatgagagtgaaagcgagtctgatgcctcagac
aatgaagaaagtgacaatgagagctccaaatttttgagttctggagacgatgatgacttc
aacccgttcagagatgagtccagtgaagatgatgaagatgatccctggttgatcagaaaa
gagcataaaaaaaataaagaaaagaaaaagaagaaaagcatagacccagattctattcaa
agtgccttactagcctctggcctgggatccaaacgacccagctgtttcacttccactgtt
ggaaccaccacttctagtaccaacacgtctgcaaacagtaacacaaacagcagctttgta
acgagtcaggatgctgttgaaagggcccaacaaatgaaaaaagaactgctggataaactg
gaaaagctggctgaagatcttccacctaacacactggatgagctgatagatgaactgggt
ggtcctgaaaatgttgcagagatgacgggccgcaaggggagagtggtgagcaatgatgat
ggcagcatctcctacgagtccaggtctgagctcgacgtgcccgtggagatcctcaacatc
acagagaagcagaggttcatggatggagacaagaacattgccatcatctcagaggctgcc
agctctggtatctcactgcaagcagaccgcagggccaagaaccagaggaggagggttcac
atgaccctggagctgccctggagtgcagacagagcaatccagcagtttggaagaactcat
agatccaaccaagtgactgctccagagtatgtgttcctcatttctgaactggcaggagag
caaagatttgcatccatagttgcaaaacgactggagagtttgggagccctcacccacggg
gacagaagggccacagaaactcgagacctcagcagattcaactttgacaacaagtatggc
agaaatgctctggagattgttatgaaatccattgtcaacttggactccccaatggtttca
cctcctcctgattttcctggagacttcttcaaagatgttcgtcaggggttgattggcgta
ggattgatcaatgtagaagacagatctggaatactgactcttgataaagattacaacaac
atagggaaatttctgaatcgaattcttggtatggaagtccatcagcagaatgctttgttc
cagtacttctctgacacgttaaatgcagttattcaaaatgctaaaaagaatggaagatat
gacatgggcatcttagatttgggctctggggatgagaaagtgaggaaggcagatgttaag
aagtttttaactcctggatattctacctctggacacgtagagctgtacacaatcagtgtg
gaaagaggaatgtcttgggatgaagcaacaaagatctgggcagaacagacaggtccagat
gatgggttttatttatcactacagataagaaataacaagaaaacagcaattctagtaaaa
gaagtgaatcctaaaaagaagctttttttgatatacagaccaaatactgggaaacaactc
aaactagaaacatgtgcagacctgaaaaagaaatataagaaggtaccttctgaggatgct
ctgccacactggctggagcagtacaactcctctgcagacacctgcacccacgcctactgg
agaggcaactgcaagaaggcaggcctggggctggtctgtgaggtggggctgcgctgcagg
acctactacgtgctgtgtggctccgtgctgagcgtgtggacaaaggtggagggagtcctg
gcctcggtcagtggcaccaacgtgaaaatgcaaatcgtccgcctgaggacagaggatggg
cagaggatcgtaggtttgatcattcctgcaaattgtgtgtctcccctggtgaacctcctg
tcgacgtccgaccagtcgcagcagctggcagtgcagcagcagcagatctggcagcagcac
cacccccagagcatcaccaacctcaacaacgcctaa
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