Sylvia atricapilla (blackcap): 136369243
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Entry
136369243 CDS
T10263
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04020
Calcium signaling pathway
sati04080
Neuroactive ligand-receptor interaction
sati04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
136369243 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
136369243 (GRIN2C)
04082 Neuroactive ligand signaling
136369243 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136369243 (GRIN2C)
Ion channels [BR:
sati04040
]
Ligand-gated channels
Glutamate (ionotropic)
136369243 (GRIN2C)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
136369243
NCBI-ProteinID:
XP_066188050
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Position
18:complement(1937975..1948639)
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AA seq
1333 aa
AA seq
DB search
MGRAPAHALLLSMVLGCSAAFTDILLPGPEEPVVNVAVVFGGTSYPLHIRSRLSPQSFLD
MPLEIHPITVVVNNTNPSTLLTQICDILASHKIHGIVFEDNVGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQEVLTFEMSQEQSSSRTQRLLRQIDAQVLIVYCSREEAEYLF
SMAEQAGLVGPGYVWIVPSMTVGNMEVPPSSFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASFFRAHGYLPEVGRDCWTPTRATATNTSFYRHLLNVTWEHRDFSFNEGGYLVRPTM
VVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFMQPVVDNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSQSGDGLVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYL
VTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVAR
SNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPTF
TIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYI
DTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTS
LKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLAL
LQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEH
LVYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQTLSSPGRAPTPDVTASSAQANVLKML
QAAKEMVTTASVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLVVQNSTGAHRAPLSGP
YPAERLGRAYAPKGAPLGLPLSQPIPVDSHPHREENWRGANQHPHLLHPLKFRGGCVGDE
ALTGFPHLLVKTSPGGDYGEQMLVGNHVGAPLPLPTSPRDLPPPDIYREHKRPSGRGDRL
QNNPVLQRDGAHGGSGTLPRLLSAAEKKREVGSAFLPPSCSRGAFPKVTRTCRARGEAAR
PELAAMEREKPSRWPGSAGVPGERGDKRRPAGLRRCGAAPPPARADVPDLFPAAEAAYGS
GSRCPQAAGRLPPRSPVTRLPSYREACRQNPRATATVPACAPHACTNSYANVSLYARRLS
RGSPPPREHSGVHPCERGPGRWDGACRDCGRRGELALLRAVGSDRRDPLVARGVPSPCAG
GSWRRVSSLESEV
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcgccggcgcacgctctgctactgtcgatggtgctgggctgctcggctgcc
ttcacggacatcctgctgccgggccccgaggagccggtggtcaacgtggccgtggtgttt
gggggcacgtcctaccctctgcacatccggtcccgcctgagcccccagagcttcctggac
atgcccctggagatccaccccatcactgtcgtcgtcaacaacaccaaccccagcaccctc
ctcacccagatctgcgacatcctggccagccacaagatccacggcatcgtctttgaagac
aacgtgggcacagaggccgtggcccagatccttgacttcatctcctcccagacacaggtc
cccatcatcagcatcagtggcgggtctgcagtggtcctgaccccaaaggagcccggatca
gctttcctgcagttgggtgtctccatcgagcagcaaatccaggtgatcttcaaggtgctg
gaggaatacgactggggctcctttgctgtcatcaccagcctctacccaggctacaacatc
ttcctagacgtcatccgctccttcacggatgccagctactttggctgggagctgcaggag
gtgctcaccttcgagatgagccaggagcagagcagctccaggacgcagcggctcctgcgc
cagattgatgcccaggtcctcattgtgtactgctcccgagaggaggctgagtatctcttc
tccatggcagaacaagctgggcttgtggggccaggatatgtctggattgtgcccagcatg
acagtgggcaacatggaggtgccaccctcctccttcccggtgggcctcatcagcgtggta
acggagagctggaagctgagcctgcggcagaaggtgcgggatggcgtggccatcattgcc
atgggggcagccagcttcttccgtgcccatggctacctcccagaggtggggcgggactgc
tggacccccaccagggccactgctaccaacacaagcttctaccggcacctcctcaatgtg
acgtgggagcacagggacttctccttcaatgaaggtggctacctggtcaggcccaccatg
gtggtgatcacgctcaaccagcaccggctctgggagatggtgggcaagtgggagaaaggc
atcatccacatgaagtaccccgtgtggccccgctatggctccttcatgcagcccgtggtc
gacaaccgccacctgacagtggccaccctggaggagagaccctttgtcatcgtggagaac
acggaccccagcacgggggtctgtgtgcgcaacaccgtgccctgccgcaagcagaccaac
tcgtcccagagtggtgatggcctcgtggatccctacaccaagctgtgctgcaaaggtttc
tgcattgacatcctgaagaagctggccaaggcagtgaagttctcctatgacctctacctg
gtgaccaatggcaaacacggcaagattgtccgtggggtctggaatggcatgattggtgag
gtgtactacaagcgtgcagacatggccattggctccctcaccatcaatgaggagcggtct
gagatcgtggatttctctgtgccctttgtggagacaggcatcagcgttatggtggcccgg
agcaacggcaccgtgtccccctctgctttcctggagccttacagcccagctgtgtgggtc
atgatgtttgtcatgtgcctcactgtggtggccatcactgtctttgtgttcgagtatttc
agccccgttggctacaaccagaacctcaccagtggcaagaggccaggaggtcccaccttc
accattgggaagtccgtgtggctgctgtgggctctggtcttcaacaactcggtccccatt
gagaaccccaagggcaccaccagcaagatcatggtgctcatctgggccttcttcgccgtc
atcttcctcgccagttacacggccaacctggctgccttcatgatccaggagcagtacatt
gacactgtgtcggggctgagtgacaggaagttccagaggccacaggagcaatacccaccc
ttccgctttggcactgtccccaacggcagcactgagaggaacatccgcagcaactacccc
gacatgcacacccacatggtgaagtacaaccagcgctctgtggaggatgccctcaccagc
ctcaaaatggggaagctggatgccttcatctatgacgcggcagtgctcaactacatggca
ggcaaggacgagggctgcaagctggtgaccatcggcagtgggaaggtgtttgccaccaca
ggctacggcatcgccctgcagaaggactcgcgctggaagcgggccattgacctggccctg
ctccagttcctgggagatggtgagacccagaagctggagacggtttggctgtcagggatc
tgccagaatgagaagaatgaggtgatgagcagcaagctggacattgataacatggctggg
gttttctacatgctgctggtggccatggggctgagcctgctggtcttctcctgggagcac
cttgtctactggaagctgcgtcattctgtccccaagtcccacaagcttgatttcctcctg
gccatcagcaggggcatctacagctgcttcaatggcgtgcagaccctgtcgagccccggg
cgggcgcccacacccgatgtcactgccagttcagcccaggccaacgtgctgaaaatgctg
caggcggccaaagagatggtgacaacggccagcgtgggcggctcactggagcaggccacc
cgcaccatcgaggactggagcaaccacagtgagcgcctccagaccaccttctccctgagg
acaccccagctcgtggtgcagaacagcacaggcgcacatcgggcccccctctctggccca
taccctgccgagaggctggggagagcctatgctcccaagggtgctcccctgggactgccg
ctgtcccagcccatccccgtggactcccatccgcacagggaggaaaactggagaggagca
aaccagcaccctcacctgctacaccccctgaagtttcggggtggctgcgtaggggatgaa
gccctcacaggtttcccccacctcctggtgaagacttctccaggaggggattatggggag
cagatgctggtggggaaccatgtcggggctcccctcccgctccccacatcccccagggac
ctcccaccaccggacatctacagggagcacaagcggccgtcgggacggggggaccggctg
caaaacaaccccgtgctccagagggacggggcacacgggggctcagggactctgccccgg
ctgctctcggcagcggagaagaagcgggaggtgggcagcgccttcctgcctccatcctgc
tctcgcggagcctttcccaaagtcaccaggacttgcagagccaggggcgaggcggcgcgg
ccggagttggcggcgatggagcgggagaagccgagccggtggccgggctcggccggggtc
cccggggagcgcggcgacaagcggcgtcccgcggggctgcggcgctgcggggccgctcct
ccgcccgcccgcgccgacgtgcccgacctcttccccgcagctgaggccgcctacggctcc
ggctcccgctgcccgcaggccgctggtcggctgccgccgcgctcgcccgtcaccaggctg
ccgtcctaccgggaggcttgtcggcaaaacccccgtgccacggccaccgtgccggcgtgc
gctccccacgcctgcacgaactcctacgccaacgtgtccctctacgcgagacgcctctcg
cgggggtccccgccgccccgggagcactccggggtgcatccctgtgagcggggccccggg
cgctgggacggcgcctgcagagactgcgggaggcgcggggagctggccttgctgcgggcg
gtggggtcggacaggagggacccgctggtggcccgcggggtgccgagtccctgcgccggc
ggctcctggcggcgggtctccagcctggagtcggaggtgtaa
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