Sylvia atricapilla (blackcap): 136369283
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Entry
136369283 CDS
T10263
Symbol
TRIM65
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM65
KO
K12031
tripartite motif-containing protein 65
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136369283 (TRIM65)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
136369283 (TRIM65)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_2
zf-RING_6
zf-RING_5
zf-C3HC4_3
zf-B_box
U-box
SHE3
Sina_RING
DUF3584
Sec20
Prominin
Motif
Other DBs
NCBI-GeneID:
136369283
NCBI-ProteinID:
XP_066188112
LinkDB
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Position
18:complement(2716358..2720814)
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AA seq
519 aa
AA seq
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MASPISQKLEEKLVCSICLELFKVPVTLPCGHNFCKRCISDHWDKQKQAPAGTDGSYTCP
ECRRGFERCPELEKNVTLYSVVELARDSEARGSARGWCEVVPAELCRQHGRPLELYCEDE
RRCICCICTVRDCQRHRRVLFEEERAKKQTFLQESLEKAQEESERIELAMKELEVQTQSI
KDCSEEFKAGIQSKFTHLRKALEDFQCQTVARIEQEQEAALDRVDKNWNLWKDRLDVLGQ
HRERVQSLLACPDHRTFLQEFPLLPPLEGPEALVPVEFDVAAVIKPISEILTSISRLLLE
DLPGSVAPKAPDSTGQGPVHPQELAVKAVAPLPRCQLRAELLKDHRNLTFDPKTANKYLE
LSKGARKAKHSPGAVCRQEQGPRFTPWQVLCTQSYGPGHHYWEVKISSHSVILGVTYRGL
PREQQQGHRFNIGLDGGSWGLQVREDCYLAWHKGRAQKIQEQLYKNLGVSLDYGKGLLSF
YGLGERTKLIHSFHSVFTEPLYPVFWLCEGRVVTLCQRD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacccatctcgcagaagctggaggagaagctggtgtgctctatctgcctggag
ctgttcaaggtgcccgtgaccttgccctgcggccacaacttctgcaagcgctgcatcagc
gaccactgggacaagcaaaagcaggcgcccgccggcaccgatgggagctacacctgcccc
gagtgccgcaggggcttcgagcggtgcccggagctggagaagaacgtcaccctgtacagc
gtggtggagctggcccgggacagcgaggcgcggggctcggccaggggctggtgcgaggtg
gtccccgccgagctgtgccggcagcacgggcggccgctggagctctactgcgaggacgag
cggcgctgcatctgctgcatctgcaccgtccgggactgccagcggcaccggcgggtgctc
ttcgaggaggaacgagccaaaaagcagacgtttttgcaagaatccctggaaaaagctcag
gaggaatcagagaggattgagctggcaatgaaggagctggaggtgcaaacacagagcatc
aaggactgctctgaggagtttaaagctgggattcagagcaaattcacccacctgaggaaa
gctctggaggatttccagtgtcagacagtggccaggattgaacaagagcaggaggcagca
ctggaccgtgtggacaagaactggaacctgtggaaggaccgcctggatgtccttggccag
cacagggagagggttcagagcttgctggcctgccctgaccacaggaccttcctccaggaa
ttccccctgctcccacctctggagggcccagaggcgctggtgcccgtggagtttgatgtg
gctgctgtgatcaagcccatctctgagatcctcaccagcatctccaggctcctgctggag
gacctgcctggctctgtggcccccaaagccccagactccactggccaaggcccggtgcat
ccccaggagctggcagtgaaggctgtggcccctctccccaggtgccagctccgagctgag
cttctgaaggaccaccgcaacctgaccttcgatcccaagacagccaacaagtacctggag
ctgtcaaaaggtgcccggaaggccaagcacagtcctggtgctgtctgcaggcaggagcag
ggcccccgcttcacaccctggcaggtgctgtgcacacagagctacggccctggtcaccac
tactgggaggtgaagatctccagccactccgtcatcctgggggtcacctaccgggggctc
ccccgggagcagcagcagggccacaggttcaacatcgggctggatgggggctcgtggggg
ctgcaggtgcgggaggattgttacctggcctggcacaagggcagggcccagaaaatccag
gagcagctctataagaacctgggagtcagcctggattatggcaaggggctcctctccttc
tacggcctcggggagagaacaaagctcatccactccttccacagtgtcttcactgagccc
ctgtaccctgtgttctggctgtgtgaggggcgggtggtgacgctgtgccagagggactga
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