Sylvia atricapilla (blackcap): 136369301
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Entry
136369301 CDS
T10263
Symbol
ARFGEF1
Name
(RefSeq) LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136369301 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136369301 (ARFGEF1)
Membrane trafficking [BR:
sati04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
136369301 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
136369301
NCBI-ProteinID:
XP_066188158
LinkDB
All DBs
Position
1:complement(118608109..118693999)
Genome browser
AA seq
1843 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKS
GSSTLPPVKSKTSFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQHHLQQSPVSHHE
PESPQLRHIPAQADQLSKDHERELDHSTNDVDKNLQEDIEAENGSDISSAENEQTEADQA
TAAENLSKADGGTYDGESNECEEKAQEIVESIVQEMVNIVVGDVEGTSGGDGTTVSLEDG
SDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPTPGAKFSHILQKDAF
LVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQY
LCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDH
KWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQ
ELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPTEQDSSETKHPETINRYGS
LNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQG
MLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMF
LEGFRLPGEAQKIDRLMEKFAARYLECNQGXDSFASADTAYVLAYSIIMLTTDLHSPQVK
NKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQSVASE
KQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGL
QDCDDTEVASLCLEGIRCAIRIACIFNIQLERDAYVQALARFTLLTVSSGITEMKQKNID
TIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSFTGTK
DQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFV
RWLCAVSMDELLSATHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNE
DVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMV
NSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTIVFEKHFPATIDSFQDAV
KCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWFP
ILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQ
TEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCL
ENVVILNGEKFTLEIWDKTCTCMLDIFKTTIPHALLTWRPVGGEFCSGSPSDAKEKLDTI
SQKSVDIHDSIQPRSSDGRPYQPSTGATVAEETSKARPAAKFPEQKLFAALLIKCVVQLE
LIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVHVDTQDQGMYRFLTSQQLFKLLDCL
LESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESRTSA
WEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKINDERFKAHASFYYPL
LCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQEVGTSKH
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagggaagaagacgaaaaacatgtttctgacccgggccctggagaagatcctg
gccgacaaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtggca
ctagaggaaataaaggctgaaacagaaaagcaaagtccccctcatggagaagcaaagtct
ggttcaagcactcttccacctgtgaaatcaaagacaagcttcattgaagcggacaaatac
ttcctaccatttgaattggcatgccagtccaagtgccccaggattgtcagtacatctcta
gattgtttacagaaacttatagcatatgggcacttgacagggaatgctccagacagtaca
gctccaggaaaaaaactaattgatagaattatcgagacaatatgtggctgttttcagggc
cctcaaacagatgaaggggttcagctacaaataataaaggctttgctcactgcagtaaca
tctcaacacatagaaatccatgaaggaacagtactgcaggctgtaagaacatgttacaat
atctacctagcaagcaaaaatcttataaatcaaactacagccaaggccactctaacacaa
atgctgaatgtcatttttgcacgtatggaaaatcaagcacttcaagaagccaaacagatg
gaaaaggaaagacacagacagcaacaccatctccagcagtctccagtgagccatcatgag
cctgagtcaccacagttgagacatattccagcacaggccgatcaactgtccaaagaccat
gagagagagcttgaccatagcacaaatgatgtggacaagaaccttcaggaagatattgag
gcagaaaatggatctgacatttctagtgctgaaaatgagcagacagaagctgaccaagcc
acagcagcagaaaatctttctaaagctgatggaggaacatatgatggtgaaagcaatgag
tgtgaagagaaggcacaagaaattgtagaaagtattgtgcaggaaatggtgaacatagta
gttggagatgtggaagggacttcgggtggtgatggcacaactgtatcattagaggatggc
agtgacagtgaaaacattcaggcaaatggaattccagggactccaatttctgttgcttat
acaccatctttacccgatgacagattatctgtctcttccaacgatactcaggaatctgga
aattcttcaggacctacccctggtgctaagttttcccacattttacaaaaggatgccttc
cttgtattcaggtcactgtgtaaactctccatgaagcccctgtcagatggaccaccagat
ccaaaatctcatgaactgcgatcgaagattctttcattgcagttgcttctgtccattctg
caaaatgcaggaccagtcttcaggacaaatgagatgttcattaatgctataaagcagtac
ctctgtgttgcactgtcaaaaaatggagtctcatcagttccagaagtttttgaactttca
ctttccatatttcttaccctcctgtcaaactttaagactcatctaaagatgcagattgag
gttttcttcaaagaaattttcctgtatatcttggaaacttctactagctcatttgatcat
aaatggatggttatacaaacactgacaaggatatgtgcagatgctcagagcgtggtggac
atctatgtgaactacgattgtgatttaaatgcagcaaatatatttgaaaggctggttaat
gacttatcaaagattgctcaaggaaggggtagccaagaactcggcatgtccaatgttcag
gaattaagtttgaggaaaaaaggattggaatgcttagtatcgatcttgaaatgcatggtg
gagtggagtaaggatcaatatgtaaatcccaattcccagacaactcttggccaagaaaaa
cccacagaacaggacagcagtgaaaccaaacaccctgagacaattaacagatatggaagc
ttaaattctttggattctactgcttcatcaggaattggcagttacagcacacagatgtct
ggcactgacaacccagagcagtttgaagtcctaaagcagcaaaaggaaataatagaacaa
ggaattgacttattcaacaagaaaccaaagagagggattcagtacctgcaagaacaagga
atgcttggcactacccctgaagatattgcacaattcttgcatcaagaggaaagattagat
tcaactcaggttggggagttcctgggagacaatgataaatttaacaaagaagtcatgtat
gcatatgtagaccagcatgacttttccggaaaggatttcgtttcagctctccgcatgttt
ctagaaggatttcgtctgccaggagaagctcaaaaaattgatcgcttaatggagaaattt
gctgctagatacttagaatgtaaccaagggtaagattcttttgctagtgcagatactgca
tatgttttagcttactcaattatcatgttgacaacagatcttcacagtccacaggttaag
aataaaatgactaaagaacagtatattaaaatgaatagaggcatcaatgacagtaaagat
ctccctgaagaatatttgtctgctatttataatgaaatagctggaaagaagatttcaatg
aaagaaacaaaagaattaacaatacccaccaagtccagtaaacaaagtgttgctagtgag
aagcagagaagactcctgtataacttggaaatggaacaaatggcaaaaacagcaaaagct
cttatggaagcagtgagccatgttcaggccccttttactagtgcaacacatctggagcat
gtgagacccatgtttaagttggcatggacacctttcctggctgcattcagtgtgggtcta
caggactgtgatgacaccgaagttgcctctctttgtttggagggcatacgatgtgcaatt
cggatcgcttgcattttcaacattcagcttgaaagagatgcctatgttcaagcattagca
agatttacattgcttacagtgagttctggtattactgaaatgaagcagaagaatattgac
accattaaaactctcatcacggtggctcatacagatggaaactatttaggaaattcctgg
catgagattctgaaatgtatcagtcaacttgaactggcacagttaataggaactggagta
aaacctcgctacatctcagggacagtgcgtggcagggaaggttcttttactggaacaaaa
gatcaggcacctgatgaatttgtggggctgggactagttggtggaaacgtggattggaag
cagatagcaagtattcaggaatccattggtgaaactagctcccaaagcgttgttgttgct
gtagacagaatatttacgggatctacgaggttggatggaaatgctattgtggatttcgtt
cgctggctttgtgctgtgtctatggatgagctgctgtctgctacccaccctcgaatgttt
agtctgcagaagatagtagagatttcttattacaacatgggccggataaggttacagtgg
tctaggatctgggaagttattggagatcattttaataaggttggctgcaatcccaatgaa
gatgtagctatttttgcagtagactcattaaggcaattgtcaatgaagttcttggaaaaa
ggagaacttgctaatttccgattccagaaggacttcctaaggccatttgaacatatcatg
aagcgaaacaggtctcctactattcgagacatggttgtacggtgtattgcacagatggtg
aattcccaggctgctaacattcgttctggctggaaaaacattttttcagtgtttcatctg
gcagcctcagatcaggatgaaagtatagtggaactggcattccagactacaggacacatt
gtcacaattgtgtttgaaaaacacttcccagcaaccatagactctttccaggatgcagtg
aagtgcttatctgaatttgcctgcaatgcagcatttccagataccagtatggaagcgatc
cgcctcattcgccactgtgcaaaatatgtgtctgacaggcctcaggcattcaaggaatac
acaagtgatgatatgaatgtagctcctgaagacagagtgtgggtgcgaggatggttccca
attctctttgagttgtcctgtatcatcaatagatgcaaattagatgtaagaaccaggggc
ttaacagtaatgtttgaaataatgaagacatatggccatacctatgaaaaacactggtgg
caggatttgtttcgaattgtcttcaggatatttgacaacatgaaattgccagaacagcag
actgagaaagctgaatggatgacaactacctgtaaccatgcactttatgcaatatgtgat
gtatttacacagtatttagaagtacttagtgatgttcttttggatgatatatttgcacag
ctgtactggtgtgtgcagcaagacaatgaacaactggctcgatctggtacaaactgtttg
gagaatgttgtcatccttaatggtgaaaagtttaccctagaaatctgggataaaacttgc
acttgcatgctggatattttcaaaactacaatccctcatgcgctgctgacttggcgacca
gtcggtggggagttctgctctggctctccctctgatgcaaaagaaaaactggatacaatc
tcccagaaatcagtagatatccatgattccatccagcctcgatcttcagatggacgcccg
tatcagcccagcacaggggccacagtagctgaagaaacgagtaaagccaggccagcagca
aaatttccagaacagaagttatttgctgctcttttgatcaagtgtgttgtacagctggaa
ctcattcagacgatcgacaacattgtgttcttcccagcaactagcaaaaaagaggatgca
gagaatctagcagcagcacaaagagatgcagtagactttgatgtccatgtggatacacag
gatcaagggatgtatcgtttcctaacatcacagcagcttttcaaacttctcgattgtctg
ctggaatctcacagatttgctaaagcatttaattcaaacaatgaacaaagaactgctctc
tggaaagcaggtttcaaaggcaagtccaagcccaacctgctgaagcaggagacgagcagc
ctggcctgcgggctgcgcatcctgttccgcatgtacatggacgagagccgcaccagcgcc
tgggaggaggtgcagcagagactgctcaatgtctgcagcgaggctctgagctatttcctc
actcttacatcagaaagtcatcgggaagcctggactaaccttttactcttatttttgact
aaagtcctgaagataaatgatgaaaggttcaaggcccatgcctcgttctactatcctttg
ttgtgtgaaatcatgcagtttgaccttatccctgagcttcgagctgtcttgcgaaggttt
ttcctgcggattggtgtggttttccaaatatcccaaccaccagagcaagaggttggaaca
agcaagcattag
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integrated database retrieval system
