Sylvia atricapilla (blackcap): 136369473
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Entry
136369473 CDS
T10263
Name
(RefSeq) ATP-binding cassette sub-family A member 9-like
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136369473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136369473
Transporters [BR:
sati02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
136369473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
nSTAND_NTPase5
AAA_15
Motif
Other DBs
NCBI-GeneID:
136369473
NCBI-ProteinID:
XP_066188433
LinkDB
All DBs
Position
18:9998273..10022265
Genome browser
AA seq
1542 aa
AA seq
DB search
MDYPTQEFPYKSLGSLEDPAFNTSGVTLLYTPATNSTRRIMAKVASSSSLRGVIIEEVEN
EAKMEEKGLSEEETIGVVFKDDFSYILRFPVGRAAFPNEGFQHIETCWDFSARHCRVPLY
WYGGFLSVQSSIDAAIIEMKTNHSVWREMESITGVHLKTVIKPLFKLDYLWFSIFAILSY
CPYMHFLSIKVLKEKKKLKILMRAMGLQDISFWLSWSLLYTVYVSITASLLTWVTLSEAF
PQNSFLDVYFFYFFYGTASIHFTFLLSSLLKQRNISSFVGFLLHVLLGMLGFLTLFGKVP
RALEWILSLFSPFAFTAGLATMVKIEKYGPASTPELQPFSNLYLILSFDSVLYFLLAIYF
DKVLPGKYGIPHPPAFFLRPWYWLGGSSGYVGVRAGSSHDPVLGCDAEPMPPGFDGKEAI
RLNNIKKIFKKKNKSTEALKGLSLTIYEGQITALLGHSGSGKTALLNVLSGFSKPSEGSA
MIYNYNASEIWDIEGMQEKVGICPQINLHFEALTVKENLRIFAHIKGIPWKEVDEEVQKV
LVVLDLTDAQNVCADALSGGQKRKLSLGIAILGNPKVLLLDEPTAGLDPCSRHHIWSVLR
ERRAGRVTLFTTQSMEEADAQADRKAFLSCGRLQTVGSSLYLKRKWGIGYHLRMHINDLC
DPELVSSVVRQYIPDAVLKGQKRNELCFRLPLENTDSFPGLFSHLESNLLQGVVDYEVTR
TTLEDVFLKLQGEEAIDPEGDGDLEERDQNFPGFSKQEILAMSGMMLWRQQVCAVLRIRL
LRLKHEGKFLRGILLLFGTFILPPLMTLMLFHLWHNSSSWEITSSPYFLPTKEKIQNRST
NLLIFNDTGSEIEDFIAALKAQNITPEITQEKNITSLPDYNGAIKISLEGKRQQFTVMCS
LEPINCFPVLVNILSNTFLKLHNSTARLRVWSQLFYTGGNGELTNYIFFGLFTYLLVLAA
GLPPLFAISSVEDYKLQARSQLRLAGLFPSAYWCGQALVDIPLFWSLMCLMFGLLVLFTR
ICPLEAKAVLTLLICLFGYGMSLVLLVYLMAFVFHTGRSNRYIWSLTFILVNYAAFMNSD
HHEALYYVCMLIPVFPPVGWIMFSGLNFIIYNNHTIFETWNYVYIPVFAPYIHCVILVFL
LRCLEMRYGEGVPGFDPVFRIQQRRVVTQQNKDHPGEEPPEVQAERERMRSAAALLQHEE
DLVVVNSLRKEYEVRTATSIFKKKKKLAVKNLSFGVKKGEVLGLLGPNGAGKSTTLKMIS
GGVAVTAGEVLFRGRDEATPCPGALGWCPQLDPLWPHLTVLQHLEAFAAVRGMREEDAAL
AISCIGRALDLLKHFKTPARSLSAGEARKLSFALSILGDPTVMLWDEPSVSMDPKGQRRM
WKVIQASMRSKERAAILCTQSVEEAAAMCDRVAILVSGQLRYIGSLEDLKSKFGTSYHLE
LKMTDVGHSDALHREILNLFPYAARQERTSSLLTYKIPVADALPLSRSFSKLEAAKRTFK
LEEYSLSLNTFHQVFVDLTRDAEEHDLEVASNGAVEQRPLHP
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggattaccccacccaggaattcccctacaaatccctggggagcctggaggacccagcc
ttcaacacctcgggggtgacactcctctacacccctgcaaccaactccaccaggagaata
atggccaaagtggcctccagctcgtcactgaggggtgtaattatagaagaggtggaaaac
gaggcaaaaatggaagaaaaagggctctcggaggaggaaaccatcggcgtggtttttaag
gatgacttctcctacattctcagatttccagtgggcagagctgcgtttccaaacgaaggc
tttcagcacatagaaacctgctgggatttttcagccaggcactgcagagtccctctgtac
tggtacgggggtttcctctccgtgcagtccagcatcgatgcagcaatcatagaaatgaaa
accaaccactctgtgtggagggaaatggagtcaattactggagttcacctaaaaaccgtg
attaaacccctgtttaaactggattacctttggttcagcatctttgccatactgagctac
tgcccatacatgcactttttatccatcaaagtcctcaaggagaagaagaagctgaagata
ttgatgagagcaatgggtctgcaagacatttccttctggttatcctggagcttgctgtac
actgtgtatgtctccatcacagccagcctgctgacctgggtcaccctgagcgaagccttt
cctcaaaacagctttttggatgtgtatttcttttatttcttttatggcacggcatctatt
cacttcactttcctgctcagctcgttgctaaagcagcgaaatatttccagttttgtggga
ttcctccttcacgtcctccttgggatgctgggctttttgacattgtttggaaaagtgccc
cgggctttggagtggattttaagcctcttcagtccttttgccttcacagctggccttgca
acgatggtaaaaatagaaaaatatgggccagcatctaccccagagttgcagcctttttct
aacctgtacctcatcctgagcttcgacagtgtcttgtatttcctgctggccatctacttc
gataaggttttgccaggcaagtacgggatcccacatcctcctgccttcttcctgaggccc
tggtactggctcgggggcagcagtgggtacgtgggggtgagagctggcagcagccacgac
cccgttctcggctgcgacgccgagccgatgccgccgggcttcgatggcaaggaagccatc
agactaaacaatattaaaaaaatattcaagaagaagaacaagagcaccgaagctttaaag
ggtttgtccttaactatttacgaaggccagatcactgcactgctgggtcacagtggatcc
gggaaaactgctctgttaaatgttctcagcgggttttccaagccttcagaaggttctgcc
atgatctacaactacaatgcttctgaaatatgggatatagaaggaatgcaggaaaaagtt
gggatttgcccccaaattaatttgcattttgaagccttaacggtgaaagaaaacctgaga
atttttgctcacatcaaaggtattccgtggaaggaagtggatgaagaggtgcagaaagtt
ctcgtcgtgctggacctcaccgacgctcagaatgtttgtgctgatgccctgagtggggga
cagaagcgaaaattgtcccttggaattgcaattttagggaatcccaaggtgttgctgctg
gacgagcccacggcagggctggatccctgctccaggcatcacatctggagtgtgttgcgg
gagcgccgcgccgggcgcgtcacgctcttcaccacccagtccatggaggaggctgatgct
caggctgatcggaaagctttcctctcctgtgggagattacagactgtcggctcatctctc
tacttgaagagaaagtggggaattggctatcacttgaggatgcacattaacgacctgtgt
gacccagagcttgtgtcatccgtggtcaggcagtacatccctgatgctgtgctcaagggg
cagaaaaggaatgaactgtgttttaggctgcctctggaaaacactgacagcttcccaggt
ctgttcagccacctcgagagcaacctcttgcagggggttgttgattatgaggtgaccagg
acaaccctggaagatgttttcctgaagctgcagggtgaggaagccatcgatccagaagga
gatggagacctcgaggagagggaccagaacttcccggggttctccaagcaggagatcctg
gccatgagtgggatgatgctctggaggcagcaagtgtgtgctgtgctgagaattcgcctg
ctgaggctgaagcatgaaggaaaattcctcaggggaatattactgttatttggaacgttt
atccttccacccctgatgactttaatgctgtttcatctgtggcacaactccagcagctgg
gaaatcacatctagcccgtattttcttcccacaaaagagaaaattcaaaataggtctaca
aacctcctcatcttcaatgacacaggatcagaaatcgaggatttcattgctgctttgaag
gctcaaaacataaccccagaaataactcaagagaaaaatatcacgagccttccagattac
aatggagctataaaaatatccctggaaggcaagaggcagcagttcacggtcatgtgcagc
ctagagcccatcaactgcttccctgtgctggtgaacatcctcagcaacaccttcctgaag
ctccacaattccaccgcgcgcctccgcgtctggagccagctcttctacacgggaggaaac
ggagagctaacaaactacatttttttcggcttgttcacctacctgctggttttggctgct
ggtttgcctcctctctttgccatcagcagcgtggaggattacaagctccaggctcgctcc
cagctgcgcctggcggggctcttcccctcagcctactggtgtgggcaggctctagtggac
atccccctcttctggagcctgatgtgcctcatgtttgggctcctagtgctcttcacccgc
atctgccccttggaggccaaggccgtgctgaccctgctcatttgcctctttggttatggg
atgtctcttgtcctccttgtttatttaatggccttcgtgttccacacgggacgaagcaat
cgttacatttggtctttaaccttcattttggtgaattatgctgcttttatgaacagtgac
catcatgaagcactttactacgtctgtatgctgattcctgtgtttccacccgtgggctgg
atcatgttctctggactaaatttcatcatttataacaatcacacgatttttgagacgtgg
aattacgtctacatacctgtctttgcaccgtacatccactgtgtgattttggttttcctc
ctgcgctgtttggagatgagatatggagaaggagtccctggatttgatcctgtcttcagg
atccagcagaggagagtggtcacccagcagaacaaggaccaccctggagaggagcccccc
gaggtgcaggcggagagggagcggatgcggagcgccgcggctttgctgcagcacgaggag
gacttggttgttgtcaacagtttgcgcaaggaatacgaagtcaggacagccacttccatt
tttaagaaaaagaagaaacttgctgtcaaaaacctctcttttggtgttaaaaaaggagaa
gtcttaggtctgttaggacccaacggagctggcaaaagcacaactctcaagatgatttct
ggaggtgtagcagtgactgctggggaggtgctgttcaggggccgggatgaagccacccca
tgcccgggggccctgggctggtgcccacagctggacccactctggccacacctgacagtg
ctgcagcacctggaggcctttgctgctgtcagagggatgagggaagaagatgctgctctt
gccatcagctgcataggaagggccttggatctcctgaagcatttcaagaccccagcaaga
agtttatctgctggagaagccagaaagctgtcctttgctctgagcatcctgggagaccca
acagtgatgctttgggatgaaccctcagtgagcatggaccccaaagggcagcgccgcatg
tggaaggtgattcaggcctccatgaggagcaaggagagggcggccatcctctgcacacag
tccgtggaggaggcggcggcgatgtgtgaccgcgtggccatcctggtgtctggccagctc
cgctacatcggttcccttgaggatctcaaaagtaagtttggcacaagttaccacctggaa
ctcaaaatgacagacgtggggcacagcgatgctctccacagagaaatcctgaacctcttc
ccctacgcagctcggcaggaaaggacttcttccttgctgacctacaagattccagtggca
gatgcactacctctgtccaggtctttctccaagctagaagcagctaaacggaccttcaag
ctggaggagtacagcttgtcactgaacactttccaccaggtgtttgtagacctcaccagg
gatgcggaggagcacgacctggaggtggcatccaacggggctgtggagcagagacccctt
cacccctga
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integrated database retrieval system
