Sylvia atricapilla (blackcap): 136369590
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Entry
136369590 CDS
T10263
Symbol
CACNA1B
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04010
MAPK signaling pathway
sati04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
136369590 (CACNA1B)
04020 Calcium signaling pathway
136369590 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136369590 (CACNA1B)
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
136369590 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
136369590
NCBI-ProteinID:
XP_066188583
LinkDB
All DBs
Position
19:complement(3060456..3244257)
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AA seq
2125 aa
AA seq
DB search
MKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGKFHKTCFSNETGEEVGDFPCGEEPPARQC
ESGTTCREYWQGPNYGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFI
PLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEE
VMLAEEDKNAEEKSPLDAVLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSG
KNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVHYDQPEKLTTALYF
AEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISV
LRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN
FQDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFG
NYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAA
FVKQTRGTVSRSSSVSSVNSPXQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEER
VRYATTLHIRPDMKTHLDRPLVVEPRGEGRNNITKLSPGDVQEAVEHPKATSTDGAEAPR
KHHRHRDKEKPAEHEKGDATKDESGETGAGNKEERHRQHRSRSKEVEGGSKEGKSDRNRG
QEGGKRHHRRGSVEEGADKEHRRHRGHRHSSDRPPKDGNAPANGRAERRARHRGGSRSGN
RDGEPGAKGDNGEEPHRRHRLRNRALATYESVEKDSGDKEGEAAEKEHRNHQPKENQCEL
EASGSGSGPGSVPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITA
PPGETTVIPMNNVEFESRTEEKKDDDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVN
LRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLL
LHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLD
YEKNEVEAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGY
RMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKP
LTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNI
VFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAVSTDNFINLSFL
RLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD
DETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSKRACDPLSGLTKKECGSDFAY
FYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRIS
YTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEI
KLASGGVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYK
QNKNSREQVQPPGGLCQPGPVSLFHPLKATLEQTQPAAFSNAKAFLRQKSSASLNNGGAL
PPPEGGIKESSSWGTQRTQDVFYETRSPAFERGHSEEIPIERVVEMKEISPTVANGEPQP
GLESQGRAASMPRLAAETQPIPDTSPMKRSVSTLTPQRPHPMHLYEYSLERMPPEQGHHH
HHHRCHRRKEKKQKSLDRAAHHMADGQAVAQSGESSSKDKKERGRSQERKQHSSSSSEKQ
RFYSCDRYGSRDRAQPKSADQSRPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGASTPCRG
RRQLPQTPLTPRPSITYKTANSSPVHFTTFQSPTFSPGRLSRGLSEHNALLRGEQPPAVA
RIGSDPYLGHRDGDSAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVPNGYHY
TLGLNAGPAARGRSYYHEADEDDWC
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccatggtgcccttgctgcagatcgggctgctcctcttcttcgccatcgtgatg
tttgccatcatcgggctggagttctacatgggcaaattccacaaaacctgcttttccaac
gagacaggtgaggaggtgggggattttccctgtggagaggagcctcctgccaggcagtgt
gagagcgggaccacgtgcagggagtactggcagggccccaactacggcatcaccaacttt
gacaacatcctcttcgccgtgctcaccgtgttccagtgcatcaccatggagggctggacc
gacatcctctacaacacaaacgacgctgcaggaaacacctggaattggctttacttcatc
cctctcatcatcattggctctttcttcatgctcaacttggtgctgggcgtcttatcaggt
gagtttgccaaggagcgggagcgggtggagaaccgccgggcgttcctgaagctccgcagg
cagcagcaaatcgagcgggagctcaacggctacctggagtggatcttcaaagcagaggag
gtcatgctggccgaggaggacaagaacgccgaagagaagtcccctctggacgcagtgttg
aaaagagccgcaataaagaagagcaaaaatgacctgattcatgcagaagaaggtgaggac
catttcacagacatttgctccgttgggtctccctttgcccgtgccagtttgaagagtggg
aagaacgagagctcgtcctacttcaggaggaaggagaagatgttccgcttcttcatccgc
cgcatggtgaaggctcagagcttctactgggtggtgctctgcgtggtggccctcaacacc
ctctgcgtggccatggtgcactatgaccagcccgagaagctgaccactgccctctatttc
gccgagtttgttttcctggggctgttcctcaccgagatgtctttgaagatgtacgggctg
gggccaaggaattacttccactcttcattcaactgctttgactttggggtcatcgtgggc
agcatttttgaggtgatttgggctgcggtgaagccgggaacctcctttggcatcagcgtg
ctgcgagcgctgcggctgctgaggatcttcaaagtgaccaagtactggaattccctgagg
aacctggtggtctccctgctgaactccatgaagtccatcatcagtttgctcttcctgctc
ttcctgttcatcgtggtctttgccctgctggggatgcagctctttggaggacagttcaat
ttccaagatgaaactccaaccacgaatttcgacaccttccccgctgccatcctcacagtc
ttccagatcctgactggggaggactggaacgctgtgatgtaccacgggatcgagtcgcag
ggcggcgtccactcgggaatgttctcctccatctacttcatcgtcctcaccctctttggg
aactacactctcctgaacgtcttcctggccatcgctgtggacaacctggccaacgcccag
gagctgaccaaggacgaggaggagatggaggaagccaccaaccagaagctggccctgcag
aaggccaaggaagtggctgaagtgagccccatgtctgcagccaacatctccatagcggct
tttgtaaagcaaactcgaggtactgtatctcgcagctcgtcagtctccagcgtaaattca
ccgtgacagaattcctccaaatccaagtcggtttgggagcagaggacgagccagatccgg
atgcacaacttccgagccagctgcgaggccttgtacaacgagctggaccccgaggagcgc
gtccgctacgccaccaccctgcacatccgccccgacatgaaaacacacctggaccggccg
ctggtggtggagccccgcggcgagggcaggaacaacatcaccaagctgagccccggcgat
gtgcaggaggcggtggagcatcccaaagccacctccacggacggggccgaagcgccgcgg
aagcaccaccggcaccgggacaaggagaagccggcggagcacgagaaaggagacgccacc
aaggacgagagcggcgaaaccggcgcgggcaacaaggaggagcggcacaggcagcaccgc
agccgcagcaaggaggtggaaggcggcagcaaggaagggaaaagcgaccgtaacagaggg
caggaaggggggaagaggcaccaccggcggggctcggtggaggaaggggcagacaaggag
caccgcaggcaccgcggccaccggcactcctcggaccggccgcccaaggacggcaacgcg
cccgcgaacggccgcgccgagcgccgcgcccgccaccgcggagggtcccgctccgggaac
agggacggggagcccggggccaagggtgacaacggcgaggagccccaccggcggcaccgc
ctcaggaacagggccctggccacctacgagtccgtggagaaggacagcggcgacaaggag
ggcgaggctgccgagaaggagcaccgcaatcaccagcccaaggagaaccagtgtgagctg
gaggccagtggcagtggcagtggccctggcagtgtccctgtgcacaccctgcccagcacg
tacctgcagaaggtgcccgagcagcccgaggatgccgacaaccagaagaatgtgacgagg
atgattcagcctcccctggacaaaaccaccactgtgaacatccctgtcaccatcactgcc
cctccaggggagaccactgtcatcccaatgaacaacgtggagtttgaaagcagaacagag
gagaagaaagacgacgatgacttgacgaaaaacgggcctaaaccaatcctgccttacagc
tccatgttcatcctcagtcccactaatccgatccgccgcctcttccactacatcgtcaac
ctgcgctacttcgagatggtgatcctgatcgtcatcgccctcagcagcatcgccctggct
gcagaggaccctgtccaggctgagtctcccaggaatgatgctctgaaatacctggattat
atatttacaggcgtcttcacctttgagatggtgatcaagatgatcgacttggggctgctg
ctccaccctggctcctatttccgtgacctgtggaacatcctggacttcattgtggtcagt
ggggccttggtggcttttgccttctcaggaaccaaaggcaaggacatcaacaccatcaag
tccctgcgggtcctgcgcgtgctccggcctctgaagaccataaaacggctgccaaaacta
aaggctgtctttgactgcgtggtgaactccctgaagaacgtcctcaacatcctcatcgtc
tacatgctcttcatgttcatcttcgccgtcatcgccgtgcagctcttcaagggccgcttc
ttctactgcaccgacgagtccaaggagctggagaaggactgcaggggtcagtacctcgat
tatgaaaaaaatgaggtggaggcacagcccagggaatggaaaaaatacgagttccactac
gacaacgtgctctgggctctgctcacgctcttcaccgtgtccacaggggaagggtggcca
actgtgctgaagcactcggtggatgccacctacgaggagcaggggcccagccctggctac
aggatggaaatgtccatcttttacgtggtctattttgttgtcttcccttttttctttgtc
aacatctttgtggcgttaatcatcatcaccttccaggagcaaggagataaagtgatgtca
gagtgcagcctcgagaaaaacgagagggcctgcatagactttgccataagtgccaagccc
ctgacccgctacatgcctcagaacaagcaatccttccagtacaagatgtggaaattcgtg
gtgtcccctccctttgagtattttatcatggtcatgattgctctcaacaccattgtcctc
atgatgaagttctatgatgctccagaagcatacgaagaaatgctgaaatgcctgaatatt
gtgtttacatccatgttttccatggaatgtgtgctgaagatcattgcctttggtgtgctg
aactatttccgagatgcctggaatgtctttgattttgtaacagtgttgggaagtattact
gatattttagtaacagagattgcggtaagtacagacaacttcatcaacctcagcttcctg
cggctcttccgggcagccaggctcatcaaactcctccgccagggctacaccatccgcatc
ctgctctggacattcgtgcagtccttcaaggccttgccttatgtgtgtctcctcattgca
atgctcttcttcatctatgccattattggcatgcaggtatttgggaacattgccttagat
gatgaaacctccattaatcggcacaacaacttccggactttcctccaagccctgatgctc
ctgttcaggagcgccacgggggaagcctggcacgagatcatgttgtcctgcttgagcaaa
agagcctgtgaccccctctctggcctcaccaaaaaggagtgtggcagtgattttgcctat
ttctacttcgtgtcgttcattttcctctgctccttcctgatgctgaacctgttcgtggct
gtgatcatggacaatttcgagtacctgacccgggactcctccatcctggggccgcatcac
ctggacgagtttgtccgggtgtgggctgagtacgaccccgcagcctgcgggcgcatcagt
tacacagacatgtatgagatgctgagacacatgtccccacctctaggccttgggaagaaa
tgcccagctcgtgttgcctataagcgcctggtgaggatgaacatgcccatctctcccgag
gatctaactgtgcacttcacctccacgctgatggccctgatccgcacggcgctggagatc
aaactggcctcaggtggtgtgaagcagcaccagtgtgatgctgagctgaggaaggagatc
tcactggtctggcccaacctgtcccagaagactctggatctgctggtgcctcctcacaaa
cctgatgaaatgactgtggggaaggtctacgcagccctgatgatatttgacttctacaag
cagaataagaacagcagggagcaagtgcagccccccgggggcctgtgccagcccgggcca
gtgtccctcttccacccgttgaaggccaccctggagcagacgcagcccgcagccttcagc
aacgccaaggccttcctgcgccagaagagctcagcctccctcaacaacgggggagccctg
ccacccccagagggagggatcaaagagtccagttcctggggaacccaacgcacccaggac
gtgttctatgagaccaggagcccggcttttgagcgaggccactccgaggagatccccatc
gagagggtggtggaaatgaaggagatcagccccacagttgccaacggagagccccaacca
ggcctggagagccagggcagggcggcctccatgccacgcctggctgctgagacccagccc
atcccggacacgagccccatgaagcgctcggtctccacgctgaccccgcagcgccctcac
cccatgcacctctacgagtattccctggagaggatgcctccggagcagggccaccaccac
caccaccaccgctgccaccggcggaaagagaagaagcagaagtccttggacagggccgcc
catcacatggctgatggacaggctgttgcccagtctggagagtcttcttccaaggacaag
aaggagcgtggccgctcccaggagaggaagcagcactcctcctcctcctctgaaaagcag
cgcttctactcctgtgaccgctatggcagccgggaccgtgcccagcccaaatctgccgac
cagagcaggcccacctcccctaatgggggcccagagcacggcccacacagacagggcagt
ggttcagttaatgggagccccttgctgtcgacatctggtgctagtaccccctgccggggt
cggaggcagctcccacagactccactgaccccacgccccagcatcacttacaagaccgct
aactcctcgcccgtgcacttcaccactttccaaagccccacgttctccccgggccgcctg
agccgcgggctgtccgagcacaacgcgctgctgcgcggggagcagccgcccgccgtggcc
cgcatcggctccgacccctacctgggccaccgcgacggggacagcgccgcgcccgaggac
acgctcaccttcgaggaggccgtggccaccaactcgggccgctcctcaaggacttcctac
gtctcctccctgacctcgcagtcgcaccaaatccgccgggtgcccaatgggtaccactac
acgctggggctcaacgcgggccccgcggccagaggacgcagttactaccacgaagctgat
gaggatgactggtgctag
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