KEGG   Sylvia atricapilla (blackcap): 136369793
Entry
136369793         CDS       T10263                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati03320  PPAR signaling pathway
sati04148  Efferocytosis
sati04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:sati00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    136369793 (RXRA)
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    136369793 (RXRA)
   03320 PPAR signaling pathway
    136369793 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sati03000]
    136369793 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sati03310]
    136369793 (RXRA)
Transcription factors [BR:sati03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    136369793 (RXRA)
Nuclear receptors [BR:sati03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   136369793 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 136369793
NCBI-ProteinID: XP_066188962
LinkDB
Position
19:8030359..8127380
AA seq 467 aa
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNSVTSTEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMLMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacaccaaacacttcctgccgctggatttctccaaccaggtgaattccacgtccctg
aactcgcccacgagccgggggcccatggccacgccgtccttgcacccgtccatcgggccg
ggcatcggctcctcgctgggctccccgggccagctgcactcgcccatcagcaccctgagc
tcgcccatcaatggcatgggcccccccttctccgtcatcagctcccccatgggcccacac
tcgatgtctgtcccctccacgcccagcctggggttcggcaccagcagcccgcagctcaac
tcgcccatgaactccgtcaccagcacagaagacatcaagccacccctggggctcaatggg
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgcggggacagatcttcgggtaaacattacggggtttacagctgtgagggctgc
aagggcttcttcaagcgcacggtgaggaaggacctgacctacacgtgcagggacaacaag
gactgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgt
ctggccatgggcatgaagagagaagccgtgcaggaggagaggcagcggggcaaggaccgc
aacgagaacgaggtggagtccacgagcagcgccaacgaggacatgcccgtggagaagatc
ctggaggctgagctggccgtggagccaaagacagagacctacatcgaggccaacatgggc
ctgacacccagctcgcccaatgacccggtgacaaacatctgccaggctgcagacaaacag
ctcttcaccctggtggagtgggccaagaggatcccccacttctccgagctgcccctggat
gaccaggtcatcttgctcagagcagggtggaacgagctgctcatcgcctccttctcgcac
cgctccatcgcggtcaaggacgggatcctgctggccacggggctgcacgtgcaccgcaac
agcgcccacagcgccggcgtcggggccatcttcgacagagtactgacagaactggtgtcc
aaaatgagggacatgctgatggacaagacagagctgggctgcctgcgagccattgtcctc
ttcaaccccgactccaagggcctctcgaacccggcggaggtggaggcgctgcgggagaag
gtgtacgcgtcactagaggcttactgcaaacacaaataccccgaccagcccggcaggttc
gccaagctcctgctccgtctcccagctcttcgatccatcggcctgaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgcccatcgacaccttcttgatggaaatgctg
gaagcgccgcaccaaatgacttaa

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