Sylvia atricapilla (blackcap): 136369969
Help
Entry
136369969 CDS
T10263
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
136369969 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136369969 (RNF43)
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136369969 (RNF43)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136369969 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
DUF2254
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
136369969
NCBI-ProteinID:
XP_066189217
LinkDB
All DBs
Position
20:complement(441680..500693)
Genome browser
AA seq
831 aa
AA seq
DB search
MSAGPQVQLAVLWPWLLMATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATR
RYQSRARPAPRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSGDQAMAASSRLIPQDMEPGRRLHLFRQHPGHALYHLPHGYPQRNLRS
LPPEPAHGNSFLHSPELSQLDFGTIHYMPYRPATSLLACSHVVPLAPGLLGQQHPNPSAC
GQALAPHRTCPLQPQPPCLAPKAALAQKQHRAPALRRGLGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGT
AMDHGQEQLRPPRERRPRSLDLMVPTGAALAKPQVLSHIHYHHHQHHHYRRDAECSPGRA
RQGPGPRKSRYSGAKVAFHSARTQKRTEKSHHSEQPLENSAVLPEAAPAGQPACPQEGWE
PPHAPSTSPNRLDFSVDANRQLGAAGTPSVSVPPRHSLQSRHHRRKRKCPLEPDPALLPK
DSAEPGACDPHLPPGHPAGYHCSPEAQPLIPSAPLPSGSQPLWKCLVPQTSSELRKQEER
LSGRERNRSVPADFSGSVTPRHSLSAHLHCPSQQGGQGFEEEVQDVHEHSV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccaggtgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccacaccgggctggcgctggcggcggccgtggagtcggagcgg
gcggcggcgcagaaagctatcatcagggtcatcccgctcaaagtggagcccatcatcctg
gaaggagagttcgccaacgtcgccgaagtgactccggccgaagggaaactactccagtct
cacccactatccctgtgcaacaccagtgaggatgaacacacagaatcaggattcatcacc
atcgtcaagctggaacagccagatcgagatcccaacccctgcctgtccctggccaacaag
gcaaagctggcaggggagcgtggagcccgtgcaatccttttcgacatcactgatgatgaa
agtgctgctgatcagctgaggaagcccagaggcctgagccagcccgtggtcctgatcagg
ggtcacgatgctgagctcctcatgggcgttgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggccagactacgacgtgtggattcttctcacagtg
gtcagcactgtggttgtcatcattttgatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactcggtgcagcagcaaaccctgcaggccatcgggcaattggccacacgc
cgctaccagtcccgggcgaggccagccccacgctgggactcggccagcagctgcagctct
gccccagtctgtgccatctgcctcgaggagttcagcgaggggcaggaactgcggatcatc
tcatgctctcacgagttccatcgggagtgtgttgacccttggctgcagcaacaccacacg
tgtccactttgcatgttcaatattcttgccagagactcaggggaccaggccatggctgcc
agctccaggctgatccctcaggacatggagcctgggcggcgactccaccttttccgccag
catccaggacatgccctttaccacctcccacacgggtatcctcagaggaacctcaggagc
ttacccccagagccagcccacggcaactccttcctccactctccagagctctcgcagctg
gattttggcaccatccactacatgccctacagaccagccacctccctgctggcctgtagc
cacgtggtcccactggccccgggcttgctggggcagcagcaccccaacccctctgcatgt
gggcaggcactggcaccccacaggacatgcccccttcagcctcagcccccctgtctggca
cccaaagcagccttggcacagaagcagcaccgtgcacctgccctgcgccgggggcttggc
catgggcaccagcacaacagcagtggctctggggagagttacctcacagagcacagtggg
tacctggctgacgggccgggcagcgactccagctcagggccctgccatggctcctccagt
gactccatgttgaactgcacggatgtcagcctgcagggcatacacggcagctgctccacc
ttccgcagctccctcagcagtgactatgatccctttgtgtactgcagctccgagggcacc
gccatggatcacggccaggagcagctgcggccgcccagggagaggcggccccggtccttg
gacctgatggtgcccacgggggctgccctggccaagccccaggtgctcagccacatccac
taccaccaccaccagcaccaccactacaggcgggacgcggagtgttcccctgggcgggcc
aggcaagggccggggccacgcaaatcccggtactccggggccaaggttgccttccacagt
gctcggacgcaaaagaggactgagaaaagccatcactctgagcagcctctggaaaacagt
gctgtgctgccagaggcagctccagcaggacagccagcctgtccccaggaaggttgggag
ccccctcatgccccctccacttctccaaacaggttggacttcagtgtagatgccaacaga
cagttgggagcagctggcacaccttctgtctcagtgccccccagacacagcttacagagc
aggcatcaccgaaggaaaagaaagtgtcccctggagcctgaccctgctctcctgcccaag
gactcagccgaacctggagcctgcgaccctcaccttcctcctggccatcccgctggctac
cactgctctcccgaagcccagcccctgatcccaagcgctcccctgcccagtggctcccag
ccactgtggaagtgtttagtgccacagaccagctccgagctgaggaagcaggaggagagg
ttgtcaggacgggagagaaaccgctcagttcctgcagatttctcagggtcggtcaccccc
agacacagtctgagtgcccaccttcactgcccatctcagcaaggtggtcagggatttgaa
gaagaggtccaggatgtccatgaacactcagtttaa
DBGET
integrated database retrieval system
