KEGG   Sylvia atricapilla (blackcap): 136369993
Entry
136369993         CDS       T10263                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati03030  DNA replication
sati03410  Base excision repair
sati03420  Nucleotide excision repair
sati03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sati00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    136369993 (RFC2)
   03410 Base excision repair
    136369993 (RFC2)
   03420 Nucleotide excision repair
    136369993 (RFC2)
   03430 Mismatch repair
    136369993 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sati03032]
    136369993 (RFC2)
   03036 Chromosome and associated proteins [BR:sati03036]
    136369993 (RFC2)
   03400 DNA repair and recombination proteins [BR:sati03400]
    136369993 (RFC2)
DNA replication proteins [BR:sati03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    136369993 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    136369993 (RFC2)
Chromosome and associated proteins [BR:sati03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    136369993 (RFC2)
DNA repair and recombination proteins [BR:sati03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     136369993 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    136369993 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_lid_RFC1 nSTAND_NTPase5 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 Mg_chelatase Rad17 AAA_11 RuvB_N AAA_assoc_2 nSTAND3 AAA_19 DNAX_ATPase_lid AAA_24 MipZ AAA_18 AAA_5 AAA_28 ABC_tran AAA_25 AAA_23 AAA_30 NTPase_1 SLFN-g3_helicase MeaB RNA_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 136369993
NCBI-ProteinID: XP_066189264
LinkDB
Position
20:3351416..3359898
AA seq 355 aa
MEVDVAEDEKAGPSAGEKRGSTDSAGAAPGGSGHYELPWVEKYRPMKLSEIVGNEDTVSR
LEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNK
IKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYTKLTDAQILARLLKIVEKEDVAYTDDGLEAIIFTAQGDMRQALNNLQST
YSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWRLGYSPEDVIGNI
FRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggaggtggatgtggcggaggacgagaaggccgggccgtcggcaggcgagaagcgggga
tccactgactctgcgggagccgcgcccggcggcagcggccactacgagctgccgtgggtg
gaaaaatacagacccatgaaactgtccgaaatagttggaaatgaagatactgtgagcagg
ttggaggtctttgcgaaagaggggaatgtaccaaatattataattgctggccctccaggg
acaggtaaaaccaccagtatcctgtgtttggctcgtgctctgcttggtcctgcactgaag
gatgctgttctggagctgaatgcctcaaatgacagaggcattgatgttgtaagaaacaaa
atcaaaatgtttgcccagcaaaaggtcacacttccaaaaggtcggcataaaataatcatc
ctcgatgaagcagacagcatgacagatggagcccagcaagcactgagaagaacaatggaa
atttattccaaaaccacacgctttgcactggcatgcaatgcctctgacaaaatcatagaa
cctattcagtcccggtgtgcagtgctgcgttacaccaagctgacagatgcacagatactt
gccaggctgctgaaaattgttgagaaagaggatgtagcatatacagatgatggactggaa
gccattatcttcacagcccaaggtgatatgagacaggcattaaacaacttacagtccaca
tactctggatttggctttataaacagtgaaaatgtctttaaggtgtgtgacgagcctcat
cctctgcttgtgaaagaaatgatacagcactgtgtaaatgcaaatattgatgaagcatac
aagattcttgcccacctgtggcgccttggatactctccagaagatgtcattggcaatatc
ttccgtgtgtgcaagacctttcaaatgcctgaatatctgaagctggaatttatcaaggaa
attgggtacactcacatgaagatagcagagggtgtgaactcccttttacaaatggctggg
ctgctggcccggctctgccagaagactgcagcccctgcagccagttag

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