Sylvia atricapilla (blackcap): 136370020
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Entry
136370020 CDS
T10263
Symbol
DHX33
Name
(RefSeq) ATP-dependent RNA helicase DHX33
KO
K17820
ATP-dependent RNA helicase DHX33 [EC:
5.6.2.6
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
136370020 (DHX33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sati03009
]
136370020 (DHX33)
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136370020 (DHX33)
Ribosome biogenesis [BR:
sati03009
]
Eukaryotic type
Other ribosome biogenesis factors
136370020 (DHX33)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
HA2_N
DEAD
AAA_19
AAA_25
Motif
Other DBs
NCBI-GeneID:
136370020
NCBI-ProteinID:
XP_066189308
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All DBs
Position
20:4070608..4080126
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AA seq
669 aa
AA seq
DB search
MARDGDGPPAKRFKAAPPGTQPQSAAPPAHVQRRSLPISGARGPLLARLRRLDTAILIGE
TGSGKTTQLPQYLYEVGIGHPGTIAVTQPRRVAAVTLAARVAEEKRTELGKLVGYTVRFD
DCSCAETRIRFLTDGMLLREAMGDPLLHKYSVVILDEAHERTIHTDVLFGVVKAAQKKRK
ERGLRLLKVIVMSATMDVDLFSQYFNGAPVIYLEGRQHPIEILYTKEQQSDYLQAALVSV
FQIHQEAPACQDILVFLTGQEEIEAMTKTCRDVAQHLPEGCPRMTVLPLYASLPHSQQLR
AFKPTPEGCRKVILSTNIAETSITIAGIKFVVDTGMVKAKKYSPETGLEVLAVQQVSKAQ
AWQRTGRAGRQESGICYRLYTEEDFEKFDEMTTPEIQRCNLASVVLQLLALKIPNVLTFD
FMSKPSPDAIQAAIDQLDLLGAVTQKEDQLVLTPLGKKMAAFPLDPKFSKAILLSPKFHC
AEEILTIVSLLSVDSVLHNPPAQRDEVQAVRKKFISSEGDHLTLLNVYRAYKNVNGHQGW
CRENFINGRNMKLMGEVRAQLRDICVKLSLPLESCRGDTASVRRCLAHSLFMNAAELRPD
GTYGTVACQQVVAIHPSSVLFQARPACLVYNGLLRTNKCYMRDLCVVDAEWLHEAAPEYF
RRKIRTAKD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggacggcgacgggcctccggccaagcggttcaaggcggcgccccccggcacg
cagccccagagcgccgcgccgcccgcacacgtgcagcgccgctccctgcccatctccgga
gcccgcgggccgctgctggcccggctccgccgcctcgacaccgccatcctcatcggagaa
acgggctcggggaagaccactcagctgcctcagtacctgtacgaggtggggattgggcac
cctggcaccattgctgtgacccagccccgcagggtggcagctgtcaccctggctgccaga
gtcgccgaggagaagaggacagagctggggaagctggtgggctacaccgtgcgcttcgat
gactgctcgtgtgccgagaccaggatccggttcctgacggacgggatgctgctgcgggag
gccatgggggaccctctgctgcacaagtacagcgtggtcatcctggatgaggcccacgag
aggaccatccacactgatgtgctctttggagtggtcaaagctgcacagaagaagcgaaag
gagcggggcctgcggctgctcaaagtgattgtcatgtcagccaccatggatgttgacctg
ttctcccagtacttcaatggagctcctgtcatctacctggaaggccggcagcatcctatt
gagatcttgtacaccaaggagcagcagagtgactacctgcaggcagcactggtgtctgtc
ttccaaatccaccaggaagcccctgcatgccaggacatcttggtgttcctgactggtcag
gaagaaattgaagcaatgaccaaaacctgtcgggacgttgcccagcatctccccgagggc
tgcccacggatgacagtgctgcccctttatgcttctctgccgcactcccaacaactccgt
gcctttaaaccgacccctgagggctgtcgcaaggtgatcctctccaccaacatcgcagag
acctccatcaccattgcagggataaaatttgttgtggacacaggcatggtcaaagccaag
aagtacagccctgaaactggcctggaagtgctggcagtgcagcaggtgtccaaggcccag
gcctggcagcgcacagggagagcagggagacaggagagtggcatctgctaccggctctac
acggaggaggactttgaaaagtttgatgaaatgacaacacctgagatacagaggtgtaac
ctagccagtgtggtgcttcaactcttggccctgaaaatccccaatgtgctcacctttgac
ttcatgtccaaaccatctcctgatgctattcaagcagcaattgatcagctggacctgctg
ggagctgtgacccagaaggaagatcagcttgtcctgacccctctgggaaagaaaatggca
gcctttccattggatccaaagttctccaaggccatcctcctgtcccccaagttccactgt
gcagaggagatcctgaccattgtgtcgctgttatcagtggacagtgtcctccacaacccc
cctgcccagagggatgaggtgcaggctgtcaggaagaaattcatctccagtgagggggat
catctgaccctgctcaacgtgtacagggcctacaagaacgtcaatggacaccagggatgg
tgcagagagaactttatcaatggcagaaacatgaagctgatgggagaagtcagagctcag
ctcagggacatttgtgtaaagctgtcgctgcctctcgagtcctgccgcggcgacaccgcc
agcgtccggcgctgcctggcccacagcctgttcatgaacgcggccgagctgcggccggac
ggcacctacggcacggtggcctgccagcaggtggtggccatccacccctcctcggtgctg
ttccaggccaggccggcctgcctggtgtacaacgggctgctgcgcaccaacaagtgctac
atgcgcgacctgtgcgtggtggacgccgagtggctgcacgaggccgcccccgaatatttc
cgcaggaagatcaggacggccaaggactga
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