Sylvia atricapilla (blackcap): 136370080
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Entry
136370080 CDS
T10263
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
136370080 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136370080 (SCARF1)
Membrane trafficking [BR:
sati04131
]
Endocytosis
Phagocytosis
Scavenger receptors
136370080 (SCARF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_2
EGF_Teneurin
DUF5930
Motif
Other DBs
NCBI-GeneID:
136370080
NCBI-ProteinID:
XP_066189407
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All DBs
Position
20:complement(6204391..6210667)
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AA seq
958 aa
AA seq
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MPLSVAGWQPGPKIALAAAFPAPPPRRTPDVWIGAPPPTFPQEETQGWREEEAAPRVGRD
RRTEGHQRGAGEPPGPGPWCPAGMESARPILCLQLWLWVQSSAQELDPEGRNVCRFPAGP
ACCPGWKQDGRACTVAVCEGEDACREGEVCVKPGLCRCKPGFFGADCSSRCPEQYWGHDC
KRSCPCHPNGRCDPVNGHCTCDPNHWGGLCQFPCQCGPHGRCDPLTGACHCEPGWWAPNC
KKQCQCNPSTSHCDPLTGLCRCLPGWWGRRCSFKCSCNVSPCAQETGKCECLPGFWGPAC
QRRCDCGHGSCSPVTGHCSCQPGYQGRSCREPCPAGKYGSQCVYSCGSCKRSQPCSPVDG
FCLACQPGWNGTLCKDPCAPGFHGEGCLQLCPRCQQGEPCDPQTGSCLHCDPGWTGPSCN
SSCPVGTFGDGCQFLCPECVSGSCDPVTGVCICQAGYWGDSCNATCPEGYFGVNCSSPCH
CSRGTCDPVQGDCVLSLKDHGALAAAILVPLLLLLLCVACCCCGAGSADARDRAAVPDDD
VVARMKHHVQGVLANLSALVPCFNLGGSKLPKVTVSHHDTEIPFNPSFIEPPSSAWVSDS
SFSSFDTDNEGPEYSVPPREGIPLLGGAELQDGASPAGAGEALPDPSAFDSEDVSQPFAI
PRTSSIAKAKRPSVSFAEGTKFGAAETPSPSRKPKAPWGPSRLSPPPGDAGAEPLGERPA
SGCYENPEPLSKGDESHRPSPRATPGGRRRVVSSTRHVAQRVEALEAAAKSGSWEAKGKE
PNVTTIYMMVGTAGQDPKAEGTGEGPVQAVLKRLGSLQKGKWAAKEEQPKVRRSVEAIQK
PPRRALAQRRDSENSCQQRESVPGAPAESGTDKQQHTAAKRLSLLLASLSSKNAGAQDGA
SETAGATEKGKSQELVGSLERKGQAAAEEEPKYENVGSSGADCPSGPGKELPAAPPAT
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcccctttctgtggcagggtggcagccagggccaaaaatagccctggcagcagcattc
cctgctccccctccccgccgcacccctgacgtctggatcggggcgcctcctcccacgttt
cctcaggaagaaacccaaggctggagggaggaagaggccgcaccgcgggtgggacgggac
agacggacagagggacaccagcgtggggctggggagccaccaggaccggggccctggtgc
ccagctggaatggagagcgcccggcccatcctctgcctgcagctgtggctgtgggtgcag
agctctgcccaggagctcgaccccgagggcaggaatgtctgcaggttcccggccggcccg
gcgtgctgtcccggctggaagcaggacgggagggcgtgcacggtcgccgtgtgcgagggg
gaggacgcctgcagggagggcgaggtgtgcgtgaaacccgggctgtgccgctgcaaaccc
ggcttcttcggagcggactgcagctcccgctgccccgagcagtactggggccacgattgc
aagcggagctgcccgtgccaccccaacgggcgctgcgaccccgtgaacggccactgcacc
tgcgaccccaaccactggggagggctgtgccagttcccctgccagtgcggcccccacggc
cgctgcgaccccctgaccggcgcctgccactgcgagccgggctggtgggcaccaaactgc
aagaaacaatgccagtgcaacccctccacgtcccactgcgaccccctgaccgggctgtgt
cgctgcctgccgggctggtggggcaggagatgcagctttaagtgctcctgcaacgtgtcg
ccctgcgcgcaggagacgggcaagtgcgagtgtctgcctggcttctggggaccggcgtgc
cagcggcgctgcgactgcgggcacggctcctgcagccccgtcaccggccactgcagctgc
cagcccggctaccagggcaggagctgccgggagccctgtccggcagggaaatacggatct
cagtgtgtgtacagctgtgggagctgcaagcgcagccagccctgctcacccgtggatggc
ttctgtctggcctgccagcccggctggaacgggaccctctgcaaggatccctgtgctcct
ggattccatggggagggctgtctccagctgtgtccccgctgccagcaaggggagccctgt
gacccccagaccgggtcctgcctgcactgtgatcccggctggacaggccccagttgcaac
agctcctgccctgtgggcaccttcggtgatggctgccaattcctctgtcctgagtgtgtt
tcggggagctgtgaccctgtgacaggagtttgcatctgccaggcaggctactggggagac
agctgcaatgccacctgtcccgaggggtattttggagtgaattgttcctcaccctgccac
tgctcccgggggacctgcgaccctgtgcagggtgactgtgtgctgagtttgaaggatcac
ggagcccttgcagccgccatccttgtccctctcctgttgctgctgctgtgtgtcgcctgc
tgctgctgtggcgccggctcagcagatgccagagacagggcggctgtgccggacgatgat
gtggtggccaggatgaagcaccacgtgcagggcgtgctggccaacctcagtgccctcgtg
ccctgctttaacctggggggctcgaaacttcccaaagtcacagtttcccatcacgacacg
gaaatccccttcaaccccagtttcatcgagccaccatcgtctgcgtgggtttcagacagc
tccttctcctccttcgacaccgacaacgagggacccgagtattccgtccctcccagagaa
ggcatcccgctgctgggcggggctgagctgcaggatggagcatcccccgctggcgctggc
gaggcgctcccggacccgtccgccttcgactccgaggatgtctcgcagcctttcgccatc
ccccgcacctccagcatcgccaaggccaagcgaccctccgtgtccttcgccgaggggaca
aagttcggggcggccgagacccccagccccagtcggaagcccaaggcgccgtggggccca
tccaggctgagcccaccgccgggggatgcgggggccgagcccctcggcgagcgcccggcc
agcggctgctacgagaaccccgagcccctcagcaagggggacgaaagccaccggccatcg
cctcgggccacgccggggggacgccgcagggtggtgtccagcacccggcatgtggcccag
agagtggaggcgctggaagcagctgccaaatccggcagctgggaggcgaaggggaaggag
cccaatgtcaccaccatctacatgatggtgggaacggccgggcaggaccccaaggcggag
gggactggcgagggacccgtccaggctgtgctgaagcgtttgggcagcttgcagaagggc
aagtgggctgccaaggaggagcagcccaaggtgaggaggagcgtggaggccatccagaaa
cctcctcgccgggccctggcgcagcgcagggactcggagaacagctgccagcagagggag
agtgtgccgggggctcctgccgagtcgggcactgacaagcagcagcacaccgctgctaag
agactgtccctcctcctcgcatctctctcgtcaaaaaacgccggcgcccaggacggggcc
agcgaaaccgcgggtgccacagagaagggcaaaagccaggagttagttggcagcctcgag
aggaagggacaggctgccgcggaggaagagccgaaatacgagaacgtgggcagcagcggg
gctgattgtccctccgggcccggcaaagagctgccggccgctcctccggccacctga
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