Sylvia atricapilla (blackcap): 136370088
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Entry
136370088 CDS
T10263
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03030
DNA replication
sati03420
Nucleotide excision repair
sati03430
Mismatch repair
sati03440
Homologous recombination
sati03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
136370088 (RPA1)
DNA replication proteins [BR:
sati03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
136370088 (RPA1)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
136370088 (RPA1)
MMR (mismatch excision repair)
136370088 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
136370088 (RPA1)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
136370088
NCBI-ProteinID:
XP_066189418
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Position
20:6298033..6320888
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AA seq
613 aa
AA seq
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MSVRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNPLVEEERLSARCICQVNRFIVNSLKDGRRVVILMDVNVLQTADQVAGPIGNPQPYNEG
QGQRSAAPAGNSAASKPQQQNGNLSGAGPAAPKYHAPSNQFGKASAPSALKTPGGSQAKV
VPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADK
FFPLLELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVS
ISDLENTPKDSIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNE
AEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLEC
ASISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENSMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLITIADCLEYQWVTCFQDTAEFILGQNA
AFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSK
RLIANIRRNAQLG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgaaggggccatcgcggccataatgcaaggggaggaagtctcc
aagcccgtcctgcaagtcatcaacacacgggctattgccacaggaactgggcccccacgt
taccgagtgctgatgagtgatggggtgaataccctctcctcattcatgttggcaacacag
ctgaaccccctggtggaagaggagcgcctgtcagccaggtgtatttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatcctgatggatgtaaatgtc
ctgcaaactgctgatcaggttgctgggcctattggcaatccccagccgtacaatgaagga
caagggcaacgttctgcagctccagcaggaaactcagcagccagcaaaccccagcaacag
aatggcaatttgtctggagcaggtcctgctgctcccaagtaccacgctccctccaaccag
tttggaaaagcaagtgctcccagtgccctgaagacacctggggggtctcaggccaaagtg
gtgccaattgccagcctgaatccataccagtccaagtggaccatttgtgctcgggtgacc
caaaaaggtcagatccgcacgtggagcaactcccgtggtgaagggaagctcttttccata
gagctggttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaag
ttctttccactccttgaattgaacaaggtatattattttaccaaaggcaatttgaagact
gctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgagact
tcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgtatcc
atctctgacttggagaacacgcccaaagactcgattgttgatgtaattggaatttgcaag
agctacgaagatgtcactaaaattacagtgaaagctaacaatagggaggtttcaaagagg
aacgtgcatctgatggatacatcagggaaactggtgacagctacgctgtggggaaatgag
gctgaacagtttgatggttccagacaacctgtgattgccatcaaaggagcccgtgtctct
gactttggtggcagaagcttgtctgtcctgtcctccagcacagttgtcatcaaccctgat
agcccagaggctttcaagcttcgaggatggtttgactctgaggggcagcttctggaatgt
gcctccatctctgatgtgaggggtgggccagcagctggagcaaataccaattggaaaact
ttgtttgaagccaaatctgagaacttgggacaaggagataaggcagattattttagctgt
gtgggcacaattgtacatctgcgcaaagagaacagcatgtaccaggcatgtccctctcag
gattgcaacaagaaagtgatagaccagcagaatggactttaccgctgcgagaagtgtgac
cgcgaattccccaacttcaagtaccgcctgatgctcctgattaccattgcagactgtctg
gaatatcagtgggtgacttgtttccaagacacagcagagttcattcttgggcaaaatgca
gctttcctgggagaactgaaggaaaagaacgagcaggcttttgaagaagtgttccaaaac
gcaaacttcaacacctacgagttcaggattcgagtgaaactggaaacttacaacgacgag
tctcgtattaaggccacagcaatggacgtcaaacccgtgaactacagagaatacagcaag
aggttgattgccaacatcaggagaaatgctcagctggggtga
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