Sylvia atricapilla (blackcap): 136370150
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Entry
136370150 CDS
T10263
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136370150 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sati01009
]
136370150 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136370150 (NCOR1)
Protein phosphatases and associated proteins [BR:
sati01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136370150 (NCOR1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
136370150 (NCOR1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
NCOR1_N
Myb_DNA-bind_6
DUF7952
Motif
Other DBs
NCBI-GeneID:
136370150
NCBI-ProteinID:
XP_066189533
LinkDB
All DBs
Position
20:complement(7535109..7590423)
Genome browser
AA seq
2533 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDSH
FQRVSAATVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLSK
EELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQI
IYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNH
ARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQER
FQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFI
NMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLYY
YLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKSDKSEKKEEEKKDEE
EKDEKEESKENTKEKDKTEVAPEETEEREQAAPRGRKTANSQGRRKGRITRSMTNEAAQA
NAAAAAATEEPPPPLPPPPEPSSTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGT
KSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIEA
SNEEENPEDSEGAENSSDTESAPSPTPAEPAKPTEETPSEPAAPKVTTEAPAEQESAIKP
AASTSPSLPAQSVSTAETQNPEPQVKEEINTEAEEPMEVDSRSHSAEAKPVITLPVHTKV
EPVETEMRLPENIQVKIETDTKEREMEKPKEKSEPEEMDYSLSQQVPTARPESHSDNDSS
ATCSADEEVDGEPDRQGIFSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPPM
VSCSPCSVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSAVSPCGTSKSP
SVEWEGKPVAYMPYAEVKRIEQEAQVQNPATRSASPYRLSPREVNKASPQPEMNAARYSV
PPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTPG
TYLTSHSQASYAQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGLL
VRAQHESVVRGTTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALAQSGIAADALLK
GTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEIGLK
RTYDTMEGNIKQGMSLRESPGSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRAT
AESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQES
RKTPEMVQTTRPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMVP
ENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDSNARRT
PVNYQSPMSRSSPMMNRVSEAGVSSGKPANHERKNTLTPTQRESVPAKSPVPGVDPVVAH
SPFDPHHRGATPEVYRGHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYA
MENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILVP
HPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAASAEREREREREKE
RERERERERERERERERERERITSVPAELYLRPGAEQPGRPGSHGYVRSPSPSVRSQENI
LQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVDA
AASAPQMEVAKAKENKHEGARIEENMGRRSAVVTDQQQMEQKTLEVEKRPVQCPYTSANY
SGGKSQGQTSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKD
ARDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPAPAQEKLQPYQQETPKPSQAETDP
NRPYEGPIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFARN
QAASQASLQPPTTTFQNSTPAPTPVPGRAKTSNRYSPEAQAQPVHHQRPGARVSPENLSD
KARGRPGKSPERSHVPSEPYEPISPPQVPVVHEKQENVLLLSQRTEPTEQRTDSRSPGSI
SYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGAVS
SRGHSFADPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQPLAVAPGGSGAAVPASNETR
REEANPSPNSGGAVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQTP
VWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHPQNRIWEREPAPL
LSAQYETLSDSDD
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctccgaaccaaggagctttcagcacggagcagagccggtac
ccgccccactctgtgcagtacaccttccccagcacccgccaccagcaggagtttgccgtt
cccgactatcgctcgtctcacctggaggtcagtcaggccacgcagctcctgcagcagcag
cagcagcagcagcagctccggcgcaggccctcgctgctctccgagttccacccgggctct
gacaggcctcaggaaaggaggactggatatgagcagcagttccatccaggcccatctcag
acagatcatgattcactggaatcaaagcgaccacgtcttgaacaagtgtctgattcccat
ttccagcgtgtcagtgcagccactgtcttacctttagtgcatcctctgcaggaagggttg
agatctgcagatattaagaaggacccagcttttggaggaaagcatgagggaccatcttct
ccaatttctggtcagccttgtggggaggaccaaaatgcttcaccttccaagctgtccaag
gaagaattgatacagagcatggaccgtgtagatcgtgaaatcgcgaaagtggaacagcaa
atcctgaaactgaagaaaaagcaacaacaacttgaagaagaagctgctaagcctcccgag
ccagagaggccggtgtcccctcctcctgtggagcagaagcaccgcagcatcgtccagatc
atttacgatgagaaccggaaaaaagcagaagaagctcacaagatttttgaaggtcttggt
ccaaaagttgaattgccactttacaaccaaccctcagacaccaaggtctaccatgagaac
atcaaaacaaaccaggtgatgaggaaaaagctgatcctattctttaaaagaaggaaccat
gcaagaaaacaacgggaacagaaaatctgtcaacgttatgatcagctgatggaggcatgg
gagaagaaagtagacaggatagaaaataatccacgcaggaaagccaaggagagcaaaaca
cgggagtactatgagaaacaattcccagaaatccggaagcagagagagcagcaagaaaga
ttccaaagagttggccaaagaggggctggcctttcagcaaccattgctagaagtgaacat
gagatttcagaaatcatcgatgggctctctgagcaggagaataatgagaagcaaatgcgg
cagctctctgtcatccctcccatgatgttcgatgcggagcagagaagggtgaagttcatc
aacatgaacgggctgatggaggatcccatgaaagtttataaagacaggcagttcatgaat
gtctggacagatcacgagaaggagatttttaaagaaaagtttgtccaacatcccaagaac
tttggcttaattgcttcctacttggaacgaaagaatgttcccgactgtgttttatattat
tatttgaccaagaaaaatgaaaattataaagcccttgtgcgaaggaattacggcaaacgc
aggggaagaaaccagcagcagattgctcgtccttctcaagaagaaaaggtagaagaaaag
gtagaagaggaaaaatcagacaaatcagaaaaaaaagaggaggaaaagaaagatgaggag
gagaaggatgagaaggaggaatctaaagagaataccaaagaaaaggacaaaactgaagtt
gcaccagaggagacagaggagagggagcaggcggctcctcggggccgaaaaaccgccaac
agccaaggtcgacgtaagggcagaatcaccagatcaatgacaaatgaagctgcacaagca
aatgctgctgcagctgcagccactgaagagcctccaccacctctgccacccccaccagaa
ccttcttctacagagcctgtggagacatcccgctggacagaagaagaaatggaagttgct
aagaaaggtctagtggaacacggccgaaactgggcagccattgccaaaatggttgggaca
aaaagtgaagcacagtgtaagaacttctacttcaactacaaaaggagacacaacctggac
agtctcctccaacagcacaaacagaagtcttcacgaaggccccgagaggagcgagatgtg
tcacagtgtgagagtgtggcttcgactgtgtcagctcaggaggacgaagatattgaagca
tctaatgaagaagagaacccagaagacagtgaaggtgctgaaaatagttctgatacagag
agtgctccatctccaactccagcagagcctgctaaacccactgaagaaactccatctgag
cctgctgctccaaaagtaaccactgaggccccagcagagcaagaatctgccattaaacct
gcagctagcacatctccctccttaccagcccaaagtgtatcaacagctgaaactcagaac
cctgagccacaggtcaaggaagaaatcaacactgaggctgaagagcctatggaggtggac
agtagaagccattcagctgaagctaagcctgtgattactcttccagttcataccaaagta
gaacctgtagagactgaaatgaggctaccagagaatattcaagtgaaaatagagactgat
accaaagagagagagatggagaaacccaaggaaaagtcagaaccggaggaaatggactac
agcctgtcccagcaagttcctacagccagaccagagtctcattcagataatgactccagt
gccacctgcagtgctgatgaggaagttgatggagaacctgaccgacagggtatcttcagc
agagagtcaaagccctcactgttaaatcccactgggtcaatcctggtatcatccacaata
aagcaagggcagatggacctgcaacagcttcaccaccgagctgctgtcatcccacccatg
gtgtcctgcagcccctgctctgtccccgtgggcaccccagtgagtggctacgctctctac
cagcgccacatcaaggccatgcacgagtcagccctgctggaggagcagcggcagcgccag
gagcagctggacatggaatatcggagcgctgtcagcccctgtggcacctccaagagcccc
agtgtggagtgggaaggaaaaccagtggcctatatgccttatgctgaggtcaagagaata
gaacaggaagcacaagtgcaaaatccagccacaaggtcagcatcaccctacaggttatct
ccaagagaagtcaataaagcctctccccagcctgagatgaatgcagctcgctacagtgtc
cctccagttctccagccagcccctcaccaggtgataaccaatattcccgaaggagttcgc
ctgcccacaaccagacccaccagaccaccaccaccactcattccatcctccaaaaccagt
gtgccatcagaaaaaccttccttcatcatgggaggctcaatctcacaaggaacacctggc
acttatttaacatcccacagtcaagcttcctacgcccaagaaactgcaaagccatcagtg
ggttctatatcccttgggctgccaaggcagcaagagtcagccaaatctgcttccctgccc
tatatcaaacaagaagaattctcacccagaagtcagaattcccaacctgaaggactcctg
gtcagggcacaacatgaaagtgtggtgcgaggtaccacaacgatacaggaggggagtata
acacgaggaactccaaccaataaagtttcagttgagaccattccttctttgagaggctcc
ataactcagggtaccccagcgctggcccagtccggcatcgccgccgacgcgctgctgaag
ggaaccatcacccgcctggccacggaggacagcagcccagagaagtgcagggaggaggcc
tcagccaagggccatgtcatttatgaaggcaaaagtggccatattctatcttatgatgca
attaaaaatgtccgtgaaggaacaaggagtccaagaactgctcatgaaattggtttaaaa
agaacctatgatacaatggaaggaaatataaagcaggggatgtcactgagggagtctcca
ggatctgcaccactggaaggtttaatctgccgagcgctgcctcggggtagcccacacgct
gaactgaaggagaggacagtcttgtctggctctataatgcaaggcacaccaagagcaaca
gctgaaagttttgaagaaggtttgaagtaccccaaacagatcaagagagagtcacctccc
atcaggacgtttgaaggagccatcaccaagggcaaaccctacgatggggtcaccaccata
aaggagatgggtcgctccatccacgagatcccaaggcaggacctgttaagccaagagagt
cgcaagactcctgaaatggtgcagacaaccaggcccatcatagaaggctccatatctcag
ggcacacccataaaatatgaaagcaactctggccagtctgccatcaaacacaatgtaaaa
tctttaatcactggaccaagcaagctgcccaggggaatgcctcagctggaaatggtgcca
gaaaacgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggacgccgtg
cggtcccgtcacacgtcagtagtcagctctggtccctctgttctcaggtcaactcttcat
gaaactcccaaatcacagctgagccctgggatttatgatgattcaaatgctcggagaaca
cctgtgaactatcagagtccaatgtccaggagctcacctatgatgaatagagttagtgag
gctggagtatcttctggaaagccagcaaatcatgaaaggaagaacacactcactccaaca
cagagggagagtgtgccagcaaaatctccagtcccaggagttgatcctgtagtagctcac
agtccttttgaccctcaccacagaggagcaactcctgaagtctacaggggtcacctccct
ccccatttagatcctgctatgccatttcacagggctctggatcctgctgctgctgcttac
ctgttccaaaggcagctgtcccccacgccggggtaccccagccagtaccagctgtacgcc
atggagaacacgcgccagaccatcctcaacgactacatcacctcccagcagatgcaagtc
aacctccggcccgatgtcaccagggggttgtcccccagggagcagactttagcactccct
tatgcaggagcacgaggaattattgacctgaacaatatggcccccactatcttagtgcct
catcctggaggaacaagcaccccacccatggaaagaatcacatatatccctggcacccag
cttaccttccctcccaggccttacaaccctgcttctctgtcaccaggacaccccacacac
ctggcagcttctgcagctgcaagtgctgaaagggaacgggaacgggaaagggagaaggag
cgggaaagggagagggaacgcgaacgagagcgggaaagagaacgagaacgtgagagggag
agaatcacctcagtccctgctgaactttatctccgaccaggtgcagagcagcctggcaga
cctggcagtcatggatatgtccggtccccatccccctctgtcagaagccaggaaaacatt
ctgcagcaaaggccaagtattttccaaggaaccaatgggacgagtgtaatcacacctttg
gatcctgctgctcagctacgtatcatgcagctcacccctggagctccctctatcactcaa
ggcttgccagcttctcgttacaacactgctgctgatgccctggcagcactggtggatgct
gcagcctctgctcctcagatggaagttgccaaagcaaaggagaacaagcacgaaggggcc
aggatagaagagaacatgggacgccggtcagctgtggtgactgaccagcagcagatggag
cagaagaccctggaggtagaaaagaggcctgtgcagtgcccctatacatctgcaaattac
tctggtggcaagtcccagggacagacttcatcagtagtctattcagaggctggtaaagag
aaaggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagaccaca
attactgctgctaacttcatagatgtgatcatcactcgccagattgcttcagacaaggat
gctcgagataggggctctcaaagttcagattcttccagtagtttgtcctcacaccggtat
gaagctcctggagatgccattgaggtgatcagccctgcaaattcacctgcacctgctcaa
gaaaagctacagccctatcaacaagagacacccaaaccaagccaggcagagactgacccc
aacaggccgtacgagggccccattcaccgctacaggacacaacaggagcccccctcaccc
cagcaacctccacctccctcttcccaggcagaggggatggcacacgtgcccaggacccat
cggctcatcacccttgctgatcacatctgtcaaattatcacacaagactttgctagaaac
caagcagcttctcaggcctctttgcagcctcccaccactacattccagaattccacccct
gctccaacgcctgttcctggccgggcaaagacctcgaaccgctacagccccgaggcgcag
gcacagcccgtgcaccaccagcggccaggggccagagtgtcccctgagaacctctctgac
aaggccaggggaaggcctggaaaatctccagagaggagtcatgtcccctcagagccctac
gagccaatctcgccacctcaggtcccagttgtacatgaaaaacaggaaaatgttcttttg
ctttcccaaagaactgagcctactgaacagaggactgactctcgctctccaggcagtatc
agttacctgccttcgtttttcaccaaacttgagaacacttcaccaatggtaaaatccaag
aaacaggagatatttcgaaagctgaactcatctggtggaggtgactctgacatggcaact
gctcagccagggactgaaatattcaatttgccagcagtcactacctcaggtgcagtcagt
tctaggggtcactcctttgcagatcctgccagtaatctgggcctggaagacattattagg
aaagcactgatgggaaactttgatgacaagagtgaggagcacggggtcgtcatgtcccaa
cctcttgcagtggctccgggcggctccggcgctgcggtaccggcgagtaatgagacacgt
agggaagaagccaatccatctcccaattcaggtggggcagtcagcaagcagaagctcatc
ggcaagtcaaacagtaggaagtcaaagtctccgattcctgggcagggatatttgggaact
gaaagaccttcttctgtctcatctgtacattcagaaggggactaccacagacagactcca
gtgtgggcctgggaagacaggccttcatcaacaggttccacccagtttccatacaaccct
ctgaccatgaggatgctgagcagcacccccccgacctccatcgcctgtgcccccccgtcc
atgagccaagcaaccactcacccacagaacaggatctgggagcgagagcctgcaccactg
ctttcagcacaatatgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
